RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A BNA6P43619 295 aa2.4□□□□□ -2.03
YSF3YNL138W-A PAC10P48363 199 aa2.4□□□□□ -2.03
YSF3YNL138W-A FMP48P53233 369 aa2.4□□□□□ -2.03
YSF3YNL138W-A GTR2P53290 341 aa2.4□□□□□ -2.03
YSF3YNL138W-A PET191Q02772 108 aa2.4□□□□□ -2.03
YSF3YNL138W-A SNZ1Q03148 297 aa2.4□□□□□ -2.03
YSF3YNL138W-A YDR124WQ04608 324 aa2.4□□□□□ -2.03
YSF3YNL138W-A YMR226CQ05016 267 aaKnown RBP2.4□□□□□ -2.03
YSF3YNL138W-A BER1Q06688 274 aaKnown RBP2.4□□□□□ -2.03
YSF3YNL138W-A MIM1Q08176 113 aa2.4□□□□□ -2.03
YSF3YNL138W-A ZWF1P11412 505 aaKnown RBP2.39□□□□□ -2.03
YSF3YNL138W-A NMT1P14743 455 aa2.39□□□□□ -2.03
YSF3YNL138W-A HSP30P25619 332 aa2.39□□□□□ -2.03
YSF3YNL138W-A AGA2P32781 87 aa2.39□□□□□ -2.03
YSF3YNL138W-A YKL063CP35725 167 aa2.39□□□□□ -2.03
YSF3YNL138W-A ECM4P36156 370 aa2.39□□□□□ -2.03
YSF3YNL138W-A PHO89P38361 574 aa2.39□□□□□ -2.03
YSF3YNL138W-A RRG9P40156 214 aa2.39□□□□□ -2.03
YSF3YNL138W-A PEP8P40335 379 aa2.39□□□□□ -2.03
YSF3YNL138W-A FLX1P40464 311 aa2.39□□□□□ -2.03
YSF3YNL138W-A FMP33P46998 180 aa2.39□□□□□ -2.03
YSF3YNL138W-A UFD1P53044 361 aa2.39□□□□□ -2.03
YSF3YNL138W-A TIM21P53220 239 aa2.39□□□□□ -2.03
YSF3YNL138W-A OKP1P53298 406 aa2.39□□□□□ -2.03
YSF3YNL138W-A PAM18Q07914 168 aa2.39□□□□□ -2.03
YSF3YNL138W-A BRX1Q08235 291 aaKnown RBP2.39□□□□□ -2.03
YSF3YNL138W-A YPS3Q12303 508 aa2.39□□□□□ -2.03
YSF3YNL138W-A UTP23Q12339 254 aaKnown RBP2.39□□□□□ -2.03
YSF3YNL138W-A ATG31Q12421 196 aa2.39□□□□□ -2.03
YSF3YNL138W-A TDH2P00358 332 aaKnown RBP2.38□□□□□ -2.03
YSF3YNL138W-A TDH3P00359 332 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
YSF3YNL138W-A YHR212W-AP0CX91 67 aa2.38□□□□□ -2.03
YSF3YNL138W-A NHP6BP11633 99 aaKnown RBP2.38□□□□□ -2.03
YSF3YNL138W-A BUB2P26448 306 aaPredicted RBP2.38□□□□□ -2.03
YSF3YNL138W-A RPL16BP26785 198 aaKnown RBP2.38□□□□□ -2.03
YSF3YNL138W-A INO2P26798 304 aa2.38□□□□□ -2.03
YSF3YNL138W-A SUA7P29055 345 aaPredicted RBP2.38□□□□□ -2.03
YSF3YNL138W-A CAM1P29547 415 aaKnown RBP2.38□□□□□ -2.03
YSF3YNL138W-A PRS4P38063 326 aaPredicted RBP2.38□□□□□ -2.03
YSF3YNL138W-A EGD2P38879 174 aaKnown RBP2.38□□□□□ -2.03
YSF3YNL138W-A YIR035CP40579 254 aa2.38□□□□□ -2.03
YSF3YNL138W-A AGP3P43548 558 aa2.38□□□□□ -2.03
YSF3YNL138W-A HAM1P47119 197 aaKnown RBP2.38□□□□□ -2.03
YSF3YNL138W-A ACT1P60010 375 aaKnown RBP2.38□□□□□ -2.03
YSF3YNL138W-A ECM19Q06011 112 aa2.38□□□□□ -2.03
YSF3YNL138W-A ASR1Q06834 288 aa2.38□□□□□ -2.03
YSF3YNL138W-A RRS1Q08746 203 aaKnown RBP2.38□□□□□ -2.03
YSF3YNL138W-A POM33Q12164 279 aa2.38□□□□□ -2.03
YSF3YNL138W-A RFM1Q12192 310 aa2.38□□□□□ -2.03
YSF3YNL138W-A YOR029WQ12243 111 aa2.38□□□□□ -2.03
YSF3YNL138W-A YOR214CQ12282 236 aa2.38□□□□□ -2.03
YSF3YNL138W-A TFC7Q12415 435 aa2.38□□□□□ -2.03
YSF3YNL138W-A CMC2Q3E7A4 109 aa2.38□□□□□ -2.03
YSF3YNL138W-A ATP6P00854 259 aa2.37□□□□□ -2.03
YSF3YNL138W-A YPK2P18961 677 aa2.37□□□□□ -2.03
YSF3YNL138W-A PPA2P28239 310 aa2.37□□□□□ -2.03
YSF3YNL138W-A GDH2P33327 1092 aaKnown RBP2.37□□□□□ -2.03
YSF3YNL138W-A AST1P35183 429 aa2.37□□□□□ -2.03
YSF3YNL138W-A SLM1P40485 686 aa2.37□□□□□ -2.03
YSF3YNL138W-A YIA6P40556 373 aa2.37□□□□□ -2.03
YSF3YNL138W-A BRR6P53062 197 aa2.37□□□□□ -2.03
YSF3YNL138W-A SDS23P53172 527 aa2.37□□□□□ -2.03
YSF3YNL138W-A RSM27P53305 110 aa2.37□□□□□ -2.03
YSF3YNL138W-A BIO4P53630 237 aa2.37□□□□□ -2.03
YSF3YNL138W-A RPL22BP56628 122 aaKnown RBP2.37□□□□□ -2.03
YSF3YNL138W-A YDR476CQ03362 224 aa2.37□□□□□ -2.03
YSF3YNL138W-A VPS60Q03390 229 aa2.37□□□□□ -2.03
YSF3YNL138W-A YDR391CQ04170 232 aa2.37□□□□□ -2.03
YSF3YNL138W-A YDR114CQ04597 100 aa2.37□□□□□ -2.03
YSF3YNL138W-A MRX9Q07349 420 aaKnown RBP2.37□□□□□ -2.03
YSF3YNL138W-A DTD1Q07648 150 aaKnown RBP2.37□□□□□ -2.03
YSF3YNL138W-A SDO1Q07953 250 aaKnown RBP2.37□□□□□ -2.03
YSF3YNL138W-A DFM1Q12743 341 aaKnown RBP2.37□□□□□ -2.03
YSF3YNL138W-A MRP1P10662 321 aaKnown RBP2.36□□□□□ -2.03
YSF3YNL138W-A CPT1P17898 393 aa2.36□□□□□ -2.03
YSF3YNL138W-A MRPL20P22354 195 aaPredicted RBP2.36□□□□□ -2.03
YSF3YNL138W-A PET8P38921 284 aa2.36□□□□□ -2.03
YSF3YNL138W-A DDI1P40087 428 aa2.36□□□□□ -2.03
YSF3YNL138W-A GAT4P40569 121 aa2.36□□□□□ -2.03
YSF3YNL138W-A CUS2P53830 285 aaPredicted RBP2.36□□□□□ -2.03
YSF3YNL138W-A SMD1Q02260 146 aaPredicted RBP2.36□□□□□ -2.03
YSF3YNL138W-A SPO77Q06134 477 aa2.36□□□□□ -2.03
YSF3YNL138W-A COQ10Q08058 207 aa2.36□□□□□ -2.03
YSF3YNL138W-A CSM4Q08955 156 aa2.36□□□□□ -2.03
YSF3YNL138W-A SNF8Q12483 233 aa2.36□□□□□ -2.03
YSF3YNL138W-A RPL27AP0C2H6 136 aaKnown RBP2.35□□□□□ -2.03
YSF3YNL138W-A RPL27BP0C2H7 136 aaKnown RBP2.35□□□□□ -2.03
YSF3YNL138W-A RPL31AP0C2H8 113 aaKnown RBP2.35□□□□□ -2.03
YSF3YNL138W-A MRPS28P21771 286 aa2.35□□□□□ -2.03
YSF3YNL138W-A VMA6P32366 345 aaKnown RBP2.35□□□□□ -2.03
YSF3YNL138W-A CAF4P36130 643 aa2.35□□□□□ -2.03
YSF3YNL138W-A SUR2P38992 349 aa2.35□□□□□ -2.03
YSF3YNL138W-A MTW1P39731 289 aa2.35□□□□□ -2.03
YSF3YNL138W-A THO1P40040 218 aaKnown RBP2.35□□□□□ -2.03
YSF3YNL138W-A YIL059CP40520 121 aa2.35□□□□□ -2.03
YSF3YNL138W-A YJL118WP47022 219 aa2.35□□□□□ -2.03
YSF3YNL138W-A GET1P53192 235 aa2.35□□□□□ -2.03
YSF3YNL138W-A CPD1P53314 239 aa2.35□□□□□ -2.03
YSF3YNL138W-A SLM2P53955 656 aa2.35□□□□□ -2.03
YSF3YNL138W-A GRH1Q04410 372 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms