RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C ATP7P30902 174 aa1.31□□□□□ -2.2
SFB2YNL049C LDS1P31379 325 aa1.31□□□□□ -2.2
SFB2YNL049C COS9P36034 407 aa1.31□□□□□ -2.2
SFB2YNL049C SHE1P38200 338 aa1.31□□□□□ -2.2
SFB2YNL049C YJL118WP47022 219 aa1.31□□□□□ -2.2
SFB2YNL049C AIF1P52923 378 aa1.31□□□□□ -2.2
SFB2YNL049C TIM11P81449 96 aaPredicted RBP1.31□□□□□ -2.2
SFB2YNL049C YDR274CP87283 123 aa1.31□□□□□ -2.2
SFB2YNL049C YDR248CQ03786 193 aa1.31□□□□□ -2.2
SFB2YNL049C HOR7Q05827 59 aa1.31□□□□□ -2.2
SFB2YNL049C BER1Q06688 274 aaKnown RBP1.31□□□□□ -2.2
SFB2YNL049C MIM1Q08176 113 aa1.31□□□□□ -2.2
SFB2YNL049C MRX4Q12467 430 aa1.31□□□□□ -2.2
SFB2YNL049C DSF1P0CX08 502 aa1.3□□□□□ -2.2
SFB2YNL049C YNR073CP0CX09 502 aa1.3□□□□□ -2.2
SFB2YNL049C FBA1P14540 359 aaKnown RBP1.3□□□□□ -2.2
SFB2YNL049C ZRC1P20107 442 aa1.3□□□□□ -2.2
SFB2YNL049C KTI12P34253 313 aaKnown RBP1.3□□□□□ -2.2
SFB2YNL049C MCH2P36032 473 aa1.3□□□□□ -2.2
SFB2YNL049C AIM2P39721 246 aa1.3□□□□□ -2.2
SFB2YNL049C ATC1Q04005 294 aa1.3□□□□□ -2.2
SFB2YNL049C YHP1Q04116 353 aa1.3□□□□□ -2.2
SFB2YNL049C CTS2Q06350 511 aa1.3□□□□□ -2.2
SFB2YNL049C ASR1Q06834 288 aa1.3□□□□□ -2.2
SFB2YNL049C MRX9Q07349 420 aaKnown RBP1.3□□□□□ -2.2
SFB2YNL049C UTP23Q12339 254 aaKnown RBP1.3□□□□□ -2.2
SFB2YNL049C YCL048W-AQ2V2Q2 79 aa1.3□□□□□ -2.2
SFB2YNL049C QCR7P00128 127 aa1.3□□□□□ -2.2
SFB2YNL049C NUF2P33895 451 aa1.3□□□□□ -2.2
SFB2YNL049C SRY1P36007 326 aa1.3□□□□□ -2.2
SFB2YNL049C PHO89P38361 574 aa1.3□□□□□ -2.2
SFB2YNL049C PET100P38958 111 aa1.3□□□□□ -2.2
SFB2YNL049C AGX1P43567 385 aa1.3□□□□□ -2.2
SFB2YNL049C BAT2P47176 376 aaKnown RBP1.3□□□□□ -2.2
SFB2YNL049C VHT1P53241 593 aa1.3□□□□□ -2.2
SFB2YNL049C YPL077CQ02831 240 aa1.3□□□□□ -2.2
SFB2YNL049C TLG1Q03322 224 aa1.3□□□□□ -2.2
SFB2YNL049C MIX17Q03667 156 aa1.3□□□□□ -2.2
SFB2YNL049C BNA7Q04066 261 aa1.3□□□□□ -2.2
SFB2YNL049C YDR115WQ04598 105 aa1.3□□□□□ -2.2
SFB2YNL049C SPO77Q06134 477 aa1.3□□□□□ -2.2
SFB2YNL049C YNG1Q08465 219 aa1.3□□□□□ -2.2
SFB2YNL049C POM33Q12164 279 aa1.3□□□□□ -2.2
SFB2YNL049C PRM4Q12498 284 aa1.3□□□□□ -2.2
SFB2YNL049C YPL229WQ99395 206 aa1.3□□□□□ -2.2
SFB2YNL049C RPL24AP04449 155 aaKnown RBP1.29□□□□□ -2.2
SFB2YNL049C CMD1P06787 147 aaKnown RBP1.29□□□□□ -2.2
SFB2YNL049C MER1P16523 270 aa1.29□□□□□ -2.2
SFB2YNL049C RPL16BP26785 198 aaKnown RBP1.29□□□□□ -2.2
SFB2YNL049C GDH2P33327 1092 aaKnown RBP1.29□□□□□ -2.2
SFB2YNL049C ZRT3P34240 503 aa1.29□□□□□ -2.2
SFB2YNL049C YKL063CP35725 167 aa1.29□□□□□ -2.2
SFB2YNL049C SRP102P36057 244 aaPredicted RBP1.29□□□□□ -2.2
SFB2YNL049C BIG1P38813 335 aa1.29□□□□□ -2.2
SFB2YNL049C CCS1P40202 249 aaKnown RBP1.29□□□□□ -2.2
SFB2YNL049C AGE2P40529 298 aa1.29□□□□□ -2.2
SFB2YNL049C IGD1P43598 195 aa1.29□□□□□ -2.2
SFB2YNL049C YPT32P51996 222 aaKnown RBP1.29□□□□□ -2.2
SFB2YNL049C CUS2P53830 285 aaPredicted RBP1.29□□□□□ -2.2
SFB2YNL049C MCH1Q07376 486 aa1.29□□□□□ -2.2
SFB2YNL049C RPL21BQ12672 160 aaKnown RBP1.29□□□□□ -2.2
SFB2YNL049C YKL018C-AQ3E7A7 99 aa1.29□□□□□ -2.2
SFB2YNL049C ERD2P18414 219 aa1.29□□□□□ -2.2
SFB2YNL049C ZIP1P31111 875 aa1.29□□□□□ -2.2
SFB2YNL049C YEL045CP32616 141 aa1.29□□□□□ -2.2
SFB2YNL049C FZO1P38297 855 aa1.29□□□□□ -2.2
SFB2YNL049C MIC12P38341 106 aa1.29□□□□□ -2.2
SFB2YNL049C RMD6P39975 231 aa1.29□□□□□ -2.2
SFB2YNL049C KRE29P40026 464 aa1.29□□□□□ -2.2
SFB2YNL049C BNA6P43619 295 aa1.29□□□□□ -2.2
SFB2YNL049C YAR1P46683 200 aa1.29□□□□□ -2.2
SFB2YNL049C MRX5P47007 382 aa1.29□□□□□ -2.2
SFB2YNL049C NSA1P53136 463 aaPredicted RBP1.29□□□□□ -2.2
SFB2YNL049C RNH201P53942 307 aa1.29□□□□□ -2.2
SFB2YNL049C YMR166CQ03829 368 aa1.29□□□□□ -2.2
SFB2YNL049C GRX3Q03835 250 aa1.29□□□□□ -2.2
SFB2YNL049C ARV1Q06541 321 aa1.29□□□□□ -2.2
SFB2YNL049C YOR289WQ12012 251 aaPredicted RBP1.29□□□□□ -2.2
SFB2YNL049C RAD28Q12021 506 aa1.29□□□□□ -2.2
SFB2YNL049C SNF6P18888 332 aa1.28□□□□□ -2.2
SFB2YNL049C YPK2P18961 677 aa1.28□□□□□ -2.2
SFB2YNL049C MRPL20P22354 195 aaPredicted RBP1.28□□□□□ -2.2
SFB2YNL049C ALK2P32789 676 aaPredicted RBP1.28□□□□□ -2.2
SFB2YNL049C SPT4P32914 102 aaPredicted RBP1.28□□□□□ -2.2
SFB2YNL049C YRA2P36036 203 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
SFB2YNL049C YJL218WP40892 196 aaKnown RBP1.28□□□□□ -2.2
SFB2YNL049C GCN20P43535 752 aaKnown RBP1.28□□□□□ -2.2
SFB2YNL049C VPS55P47111 140 aa1.28□□□□□ -2.2
SFB2YNL049C MRX11Q03079 207 aa1.28□□□□□ -2.2
SFB2YNL049C MET31Q03081 177 aa1.28□□□□□ -2.2
SFB2YNL049C ADD37Q03233 198 aa1.28□□□□□ -2.2
SFB2YNL049C VBA1Q04301 562 aa1.28□□□□□ -2.2
SFB2YNL049C NEJ1Q06148 342 aa1.28□□□□□ -2.2
SFB2YNL049C YLR173WQ06247 608 aa1.28□□□□□ -2.2
SFB2YNL049C GPN3Q06543 272 aa1.28□□□□□ -2.2
SFB2YNL049C YOL131WQ08270 108 aa1.28□□□□□ -2.2
SFB2YNL049C TRA1P38811 3744 aa1.28□□□□□ -2.2
SFB2YNL049C PHO80P20052 293 aa1.28□□□□□ -2.2
SFB2YNL049C FMP32P43557 207 aa1.28□□□□□ -2.2
SFB2YNL049C SDS23P53172 527 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms