RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	ISN1	Q99312	450 aa		12.74	□□□□□ -0.37
CCC1	YLR220W	VPS63	O13549	108 aa		12.73	□□□□□ -0.37
CCC1	YLR220W	YCR061W	P25639	631 aa		12.73	□□□□□ -0.37
CCC1	YLR220W	APJ1	P53940	528 aa		12.73	□□□□□ -0.37
CCC1	YLR220W	YLR224W	Q05947	369 aa		12.73	□□□□□ -0.37
CCC1	YLR220W	YOS1	Q3E834	85 aa		12.73	□□□□□ -0.37
CCC1	YLR220W	BGL2	P15703	313 aa	Known RBP	12.72	□□□□□ -0.37
CCC1	YLR220W	RPB9	P27999	122 aa		12.72	□□□□□ -0.37
CCC1	YLR220W	YHR138C	P38841	114 aa	Predicted RBP	12.72	□□□□□ -0.37
CCC1	YLR220W	YER137C	P40083	148 aa	Known RBP	12.72	□□□□□ -0.37
CCC1	YLR220W	BNA1	P47096	177 aa		12.72	□□□□□ -0.37
CCC1	YLR220W	YBR255C-A	Q3E776	120 aa		12.72	□□□□□ -0.37
CCC1	YLR220W	RPL9A	P05738	191 aa	Known RBP	12.71	□□□□□ -0.37
CCC1	YLR220W	PMU1	P36069	295 aa		12.71	□□□□□ -0.37
CCC1	YLR220W	SEC22	P22214	214 aa		12.7	□□□□□ -0.38
CCC1	YLR220W	SRY1	P36007	326 aa		12.7	□□□□□ -0.38
CCC1	YLR220W	RPL9B	P51401	191 aa	Known RBP	12.7	□□□□□ -0.38
CCC1	YLR220W	YIF1	P53845	314 aa	Known RBP	12.7	□□□□□ -0.38
CCC1	YLR220W	HEM13	P11353	328 aa	Known RBP	12.69	□□□□□ -0.38
CCC1	YLR220W	TIP1	P27654	210 aa	Predicted RBP	12.69	□□□□□ -0.38
CCC1	YLR220W	GEP4	P38812	185 aa		12.69	□□□□□ -0.38
CCC1	YLR220W	MRPL50	P53724	139 aa		12.68	□□□□□ -0.38
CCC1	YLR220W	TMA10	Q06177	86 aa		12.68	□□□□□ -0.38
CCC1	YLR220W	RRP15	Q06511	250 aa	Predicted RBP	12.68	□□□□□ -0.38
CCC1	YLR220W	RRT7	Q07829	113 aa		12.68	□□□□□ -0.38
CCC1	YLR220W	ECM31	P38122	312 aa		12.67	□□□□□ -0.38
CCC1	YLR220W	SWM2	P40342	146 aa		12.67	□□□□□ -0.38
CCC1	YLR220W	ARP3	P47117	449 aa	Known RBP	12.67	□□□□□ -0.38
CCC1	YLR220W	ECM27	P47144	725 aa		12.67	□□□□□ -0.38
CCC1	YLR220W	MSO1	P53604	210 aa	Known RBP	12.67	□□□□□ -0.38
CCC1	YLR220W	GPI15	P53961	229 aa		12.67	□□□□□ -0.38
CCC1	YLR220W	YNG1	Q08465	219 aa		12.67	□□□□□ -0.38
CCC1	YLR220W	ATO3	Q12359	275 aa		12.67	□□□□□ -0.38
CCC1	YLR220W	ATG5	Q12380	294 aa		12.67	□□□□□ -0.38
CCC1	YLR220W	ADE8	P04161	214 aa		12.66	□□□□□ -0.38
CCC1	YLR220W	GLY1	P37303	387 aa	Known RBP	12.66	□□□□□ -0.38
CCC1	YLR220W	PIC2	P40035	300 aa		12.66	□□□□□ -0.38
CCC1	YLR220W	PNC1	P53184	216 aa	Known RBP	12.66	□□□□□ -0.38
CCC1	YLR220W	ACT1	P60010	375 aa	Known RBP	12.66	□□□□□ -0.38
CCC1	YLR220W	MRS4	P23500	304 aa		12.65	□□□□□ -0.38
CCC1	YLR220W	PDC2	P32896	925 aa		12.65	□□□□□ -0.38
CCC1	YLR220W	LSM12	P38828	187 aa	Known RBP	12.65	□□□□□ -0.38
CCC1	YLR220W	YNL234W	P53857	426 aa		12.65	□□□□□ -0.38
CCC1	YLR220W	YLR146W-A	Q2V2P1	62 aa		12.65	□□□□□ -0.38
CCC1	YLR220W	YGL194C-A	Q2V2P6	80 aa		12.65	□□□□□ -0.38
CCC1	YLR220W	YJR112W-A	Q3E743	109 aa		12.65	□□□□□ -0.38
CCC1	YLR220W	HBN1	Q96VH4	193 aa		12.65	□□□□□ -0.38
CCC1	YLR220W	YKL162C	P36052	402 aa		12.64	□□□□□ -0.39
CCC1	YLR220W	YJR056C	P47115	236 aa		12.64	□□□□□ -0.39
CCC1	YLR220W	YJR111C	P47148	283 aa	Known RBP	12.64	□□□□□ -0.39
CCC1	YLR220W	ERV1	P27882	189 aa		12.63	□□□□□ -0.39
CCC1	YLR220W	YEA6	P39953	335 aa		12.63	□□□□□ -0.39
CCC1	YLR220W	NOP16	P40007	231 aa	Known RBP	12.63	□□□□□ -0.39
CCC1	YLR220W	DAL4	Q04895	635 aa		12.63	□□□□□ -0.39
CCC1	YLR220W	FSH2	Q05015	223 aa		12.63	□□□□□ -0.39
CCC1	YLR220W	HOF1	Q05080	669 aa		12.63	□□□□□ -0.39
CCC1	YLR220W	ERP1	Q05359	219 aa	Known RBP	12.63	□□□□□ -0.39
CCC1	YLR220W	ANT1	Q06497	328 aa		12.63	□□□□□ -0.39
CCC1	YLR220W	ATG31	Q12421	196 aa		12.63	□□□□□ -0.39
CCC1	YLR220W	SUA7	P29055	345 aa	Predicted RBP	12.62	□□□□□ -0.39
CCC1	YLR220W	TAD2	P47058	250 aa		12.62	□□□□□ -0.39
CCC1	YLR220W	PLP1	Q04004	230 aa		12.62	□□□□□ -0.39
CCC1	YLR220W	COA2	Q3E823	68 aa		12.62	□□□□□ -0.39
CCC1	YLR220W	MAG1	P22134	296 aa	Known RBP	12.61	□□□□□ -0.39
CCC1	YLR220W	SLM6	P38343	150 aa		12.61	□□□□□ -0.39
CCC1	YLR220W	YIP1	P53039	248 aa		12.61	□□□□□ -0.39
CCC1	YLR220W	YGR050C	P53231	118 aa		12.61	□□□□□ -0.39
CCC1	YLR220W	YMR166C	Q03829	368 aa		12.61	□□□□□ -0.39
CCC1	YLR220W	AIM45	Q12480	344 aa	Known RBP	12.61	□□□□□ -0.39
CCC1	YLR220W	PHO85	P17157	305 aa		12.6	□□□□□ -0.39
CCC1	YLR220W	VMA22	P38784	181 aa		12.6	□□□□□ -0.39
CCC1	YLR220W	YER188W	P40103	239 aa		12.6	□□□□□ -0.39
CCC1	YLR220W	DID2	P69771	204 aa		12.6	□□□□□ -0.39
CCC1	YLR220W	YPL264C	Q08980	353 aa		12.6	□□□□□ -0.39
CCC1	YLR220W	FCY1	Q12178	158 aa		12.6	□□□□□ -0.39
CCC1	YLR220W	RAX2	Q12465	1220 aa		12.6	□□□□□ -0.39
CCC1	YLR220W	YGL258W-A	Q3E740	77 aa		12.6	□□□□□ -0.39
CCC1	YLR220W	AGX1	P43567	385 aa		12.59	□□□□□ -0.39
CCC1	YLR220W	PKP2	P53170	491 aa		12.59	□□□□□ -0.39
CCC1	YLR220W	EST3	Q03096	181 aa		12.59	□□□□□ -0.39
CCC1	YLR220W	YKR045C	P36138	183 aa		12.58	□□□□□ -0.4
CCC1	YLR220W	ATP3	P38077	311 aa	Known RBP	12.58	□□□□□ -0.4
CCC1	YLR220W	YFL054C	P43549	646 aa		12.58	□□□□□ -0.4
CCC1	YLR220W	PUS4	P48567	403 aa	Known RBP	12.58	□□□□□ -0.4
CCC1	YLR220W	YGR151C	P53287	111 aa		12.58	□□□□□ -0.4
CCC1	YLR220W	YPL108W	Q02872	168 aa	Predicted RBP	12.58	□□□□□ -0.4
CCC1	YLR220W	CCW14	O13547	238 aa		12.57	□□□□□ -0.4
CCC1	YLR220W	PSD1	P39006	500 aa		12.57	□□□□□ -0.4
CCC1	YLR220W	RFC2	P40348	353 aa		12.57	□□□□□ -0.4
CCC1	YLR220W	TIM44	Q01852	431 aa		12.57	□□□□□ -0.4
CCC1	YLR220W	YMR082C	Q04276	118 aa		12.57	□□□□□ -0.4
CCC1	YLR220W	YMR090W	Q04304	227 aa	Known RBP	12.57	□□□□□ -0.4
CCC1	YLR220W	YPS3	Q12303	508 aa		12.57	□□□□□ -0.4
CCC1	YLR220W	NOP1	P15646	327 aa	Known RBP	12.56	□□□□□ -0.4
CCC1	YLR220W	EMP24	P32803	203 aa	Known RBP	12.56	□□□□□ -0.4
CCC1	YLR220W	PRE3	P38624	215 aa		12.56	□□□□□ -0.4
CCC1	YLR220W	PHM8	P40025	321 aa		12.56	□□□□□ -0.4
CCC1	YLR220W	AIR1	P40507	360 aa	Known RBP	12.56	□□□□□ -0.4
CCC1	YLR220W	CRH1	P53301	507 aa		12.56	□□□□□ -0.4
CCC1	YLR220W	AEP3	Q12089	606 aa		12.56	□□□□□ -0.4

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms