RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeastyeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCC1YLR220W ISN1Q99312 450 aa12.74□□□□□ -0.37
CCC1YLR220W VPS63O13549 108 aa12.73□□□□□ -0.37
CCC1YLR220W YCR061WP25639 631 aa12.73□□□□□ -0.37
CCC1YLR220W APJ1P53940 528 aa12.73□□□□□ -0.37
CCC1YLR220W YLR224WQ05947 369 aa12.73□□□□□ -0.37
CCC1YLR220W YOS1Q3E834 85 aa12.73□□□□□ -0.37
CCC1YLR220W BGL2P15703 313 aaKnown RBP12.72□□□□□ -0.37
CCC1YLR220W RPB9P27999 122 aa12.72□□□□□ -0.37
CCC1YLR220W YHR138CP38841 114 aaPredicted RBP12.72□□□□□ -0.37
CCC1YLR220W YER137CP40083 148 aaKnown RBP12.72□□□□□ -0.37
CCC1YLR220W BNA1P47096 177 aa12.72□□□□□ -0.37
CCC1YLR220W YBR255C-AQ3E776 120 aa12.72□□□□□ -0.37
CCC1YLR220W RPL9AP05738 191 aaKnown RBP12.71□□□□□ -0.37
CCC1YLR220W PMU1P36069 295 aa12.71□□□□□ -0.37
CCC1YLR220W SEC22P22214 214 aa12.7□□□□□ -0.38
CCC1YLR220W SRY1P36007 326 aa12.7□□□□□ -0.38
CCC1YLR220W RPL9BP51401 191 aaKnown RBP12.7□□□□□ -0.38
CCC1YLR220W YIF1P53845 314 aaKnown RBP12.7□□□□□ -0.38
CCC1YLR220W HEM13P11353 328 aaKnown RBP12.69□□□□□ -0.38
CCC1YLR220W TIP1P27654 210 aaPredicted RBP12.69□□□□□ -0.38
CCC1YLR220W GEP4P38812 185 aa12.69□□□□□ -0.38
CCC1YLR220W MRPL50P53724 139 aa12.68□□□□□ -0.38
CCC1YLR220W TMA10Q06177 86 aa12.68□□□□□ -0.38
CCC1YLR220W RRP15Q06511 250 aaPredicted RBP12.68□□□□□ -0.38
CCC1YLR220W RRT7Q07829 113 aa12.68□□□□□ -0.38
CCC1YLR220W ECM31P38122 312 aa12.67□□□□□ -0.38
CCC1YLR220W SWM2P40342 146 aa12.67□□□□□ -0.38
CCC1YLR220W ARP3P47117 449 aaKnown RBP12.67□□□□□ -0.38
CCC1YLR220W ECM27P47144 725 aa12.67□□□□□ -0.38
CCC1YLR220W MSO1P53604 210 aaKnown RBP12.67□□□□□ -0.38
CCC1YLR220W GPI15P53961 229 aa12.67□□□□□ -0.38
CCC1YLR220W YNG1Q08465 219 aa12.67□□□□□ -0.38
CCC1YLR220W ATO3Q12359 275 aa12.67□□□□□ -0.38
CCC1YLR220W ATG5Q12380 294 aa12.67□□□□□ -0.38
CCC1YLR220W ADE8P04161 214 aa12.66□□□□□ -0.38
CCC1YLR220W GLY1P37303 387 aaKnown RBP12.66□□□□□ -0.38
CCC1YLR220W PIC2P40035 300 aa12.66□□□□□ -0.38
CCC1YLR220W PNC1P53184 216 aaKnown RBP12.66□□□□□ -0.38
CCC1YLR220W ACT1P60010 375 aaKnown RBP12.66□□□□□ -0.38
CCC1YLR220W MRS4P23500 304 aa12.65□□□□□ -0.38
CCC1YLR220W PDC2P32896 925 aa12.65□□□□□ -0.38
CCC1YLR220W LSM12P38828 187 aaKnown RBP12.65□□□□□ -0.38
CCC1YLR220W YNL234WP53857 426 aa12.65□□□□□ -0.38
CCC1YLR220W YLR146W-AQ2V2P1 62 aa12.65□□□□□ -0.38
CCC1YLR220W YGL194C-AQ2V2P6 80 aa12.65□□□□□ -0.38
CCC1YLR220W YJR112W-AQ3E743 109 aa12.65□□□□□ -0.38
CCC1YLR220W HBN1Q96VH4 193 aa12.65□□□□□ -0.38
CCC1YLR220W YKL162CP36052 402 aa12.64□□□□□ -0.39
CCC1YLR220W YJR056CP47115 236 aa12.64□□□□□ -0.39
CCC1YLR220W YJR111CP47148 283 aaKnown RBP12.64□□□□□ -0.39
CCC1YLR220W ERV1P27882 189 aa12.63□□□□□ -0.39
CCC1YLR220W YEA6P39953 335 aa12.63□□□□□ -0.39
CCC1YLR220W NOP16P40007 231 aaKnown RBP12.63□□□□□ -0.39
CCC1YLR220W DAL4Q04895 635 aa12.63□□□□□ -0.39
CCC1YLR220W FSH2Q05015 223 aa12.63□□□□□ -0.39
CCC1YLR220W HOF1Q05080 669 aa12.63□□□□□ -0.39
CCC1YLR220W ERP1Q05359 219 aaKnown RBP12.63□□□□□ -0.39
CCC1YLR220W ANT1Q06497 328 aa12.63□□□□□ -0.39
CCC1YLR220W ATG31Q12421 196 aa12.63□□□□□ -0.39
CCC1YLR220W SUA7P29055 345 aaPredicted RBP12.62□□□□□ -0.39
CCC1YLR220W TAD2P47058 250 aa12.62□□□□□ -0.39
CCC1YLR220W PLP1Q04004 230 aa12.62□□□□□ -0.39
CCC1YLR220W COA2Q3E823 68 aa12.62□□□□□ -0.39
CCC1YLR220W MAG1P22134 296 aaKnown RBP12.61□□□□□ -0.39
CCC1YLR220W SLM6P38343 150 aa12.61□□□□□ -0.39
CCC1YLR220W YIP1P53039 248 aa12.61□□□□□ -0.39
CCC1YLR220W YGR050CP53231 118 aa12.61□□□□□ -0.39
CCC1YLR220W YMR166CQ03829 368 aa12.61□□□□□ -0.39
CCC1YLR220W AIM45Q12480 344 aaKnown RBP12.61□□□□□ -0.39
CCC1YLR220W PHO85P17157 305 aa12.6□□□□□ -0.39
CCC1YLR220W VMA22P38784 181 aa12.6□□□□□ -0.39
CCC1YLR220W YER188WP40103 239 aa12.6□□□□□ -0.39
CCC1YLR220W DID2P69771 204 aa12.6□□□□□ -0.39
CCC1YLR220W YPL264CQ08980 353 aa12.6□□□□□ -0.39
CCC1YLR220W FCY1Q12178 158 aa12.6□□□□□ -0.39
CCC1YLR220W RAX2Q12465 1220 aa12.6□□□□□ -0.39
CCC1YLR220W YGL258W-AQ3E740 77 aa12.6□□□□□ -0.39
CCC1YLR220W AGX1P43567 385 aa12.59□□□□□ -0.39
CCC1YLR220W PKP2P53170 491 aa12.59□□□□□ -0.39
CCC1YLR220W EST3Q03096 181 aa12.59□□□□□ -0.39
CCC1YLR220W YKR045CP36138 183 aa12.58□□□□□ -0.4
CCC1YLR220W ATP3P38077 311 aaKnown RBP12.58□□□□□ -0.4
CCC1YLR220W YFL054CP43549 646 aa12.58□□□□□ -0.4
CCC1YLR220W PUS4P48567 403 aaKnown RBP12.58□□□□□ -0.4
CCC1YLR220W YGR151CP53287 111 aa12.58□□□□□ -0.4
CCC1YLR220W YPL108WQ02872 168 aaPredicted RBP12.58□□□□□ -0.4
CCC1YLR220W CCW14O13547 238 aa12.57□□□□□ -0.4
CCC1YLR220W PSD1P39006 500 aa12.57□□□□□ -0.4
CCC1YLR220W RFC2P40348 353 aa12.57□□□□□ -0.4
CCC1YLR220W TIM44Q01852 431 aa12.57□□□□□ -0.4
CCC1YLR220W YMR082CQ04276 118 aa12.57□□□□□ -0.4
CCC1YLR220W YMR090WQ04304 227 aaKnown RBP12.57□□□□□ -0.4
CCC1YLR220W YPS3Q12303 508 aa12.57□□□□□ -0.4
CCC1YLR220W NOP1P15646 327 aaKnown RBP12.56□□□□□ -0.4
CCC1YLR220W EMP24P32803 203 aaKnown RBP12.56□□□□□ -0.4
CCC1YLR220W PRE3P38624 215 aa12.56□□□□□ -0.4
CCC1YLR220W PHM8P40025 321 aa12.56□□□□□ -0.4
CCC1YLR220W AIR1P40507 360 aaKnown RBP12.56□□□□□ -0.4
CCC1YLR220W CRH1P53301 507 aa12.56□□□□□ -0.4
CCC1YLR220W AEP3Q12089 606 aa12.56□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms