RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C SLM2P53955 656 aa2.4□□□□□ -2.03
SDO1YLR022C HAL1Q01766 294 aa2.4□□□□□ -2.03
SDO1YLR022C YDC1Q02896 317 aa2.4□□□□□ -2.03
SDO1YLR022C SNZ1Q03148 297 aa2.4□□□□□ -2.03
SDO1YLR022C GRH1Q04410 372 aaKnown RBP2.4□□□□□ -2.03
SDO1YLR022C ARR2Q06597 130 aa2.4□□□□□ -2.03
SDO1YLR022C CSM4Q08955 156 aa2.4□□□□□ -2.03
SDO1YLR022C POM33Q12164 279 aa2.4□□□□□ -2.03
SDO1YLR022C EAF3Q12432 401 aa2.4□□□□□ -2.03
SDO1YLR022C THP2O13539 261 aaKnown RBP2.39□□□□□ -2.03
SDO1YLR022C CYC3P06182 269 aa2.39□□□□□ -2.03
SDO1YLR022C RPL31AP0C2H8 113 aaKnown RBP2.39□□□□□ -2.03
SDO1YLR022C DSF1P0CX08 502 aa2.39□□□□□ -2.03
SDO1YLR022C YNR073CP0CX09 502 aa2.39□□□□□ -2.03
SDO1YLR022C PCL1P24867 279 aa2.39□□□□□ -2.03
SDO1YLR022C CAF4P36130 643 aa2.39□□□□□ -2.03
SDO1YLR022C ECM4P36156 370 aa2.39□□□□□ -2.03
SDO1YLR022C MRPL10P36520 322 aa2.39□□□□□ -2.03
SDO1YLR022C PRS2P38620 318 aaKnown RBP2.39□□□□□ -2.03
SDO1YLR022C COX15P40086 486 aa2.39□□□□□ -2.03
SDO1YLR022C JLP2P40206 208 aa2.39□□□□□ -2.03
SDO1YLR022C PFS2P42841 465 aaKnown RBP2.39□□□□□ -2.03
SDO1YLR022C HAM1P47119 197 aaKnown RBP2.39□□□□□ -2.03
SDO1YLR022C NOP19P53317 196 aaPredicted RBP2.39□□□□□ -2.03
SDO1YLR022C OST6Q03723 332 aa2.39□□□□□ -2.03
SDO1YLR022C YDL114WQ07530 308 aa2.39□□□□□ -2.03
SDO1YLR022C SNF8Q12483 233 aa2.39□□□□□ -2.03
SDO1YLR022C YDL012CQ12489 107 aa2.39□□□□□ -2.03
SDO1YLR022C CMC2Q3E7A4 109 aa2.39□□□□□ -2.03
SDO1YLR022C YBR121C-AP0C5L4 52 aa2.38□□□□□ -2.03
SDO1YLR022C PHO85P17157 305 aa2.38□□□□□ -2.03
SDO1YLR022C IFM1P25038 676 aa2.38□□□□□ -2.03
SDO1YLR022C DEP1P31385 405 aa2.38□□□□□ -2.03
SDO1YLR022C TIM12P32830 109 aa2.38□□□□□ -2.03
SDO1YLR022C KTI12P34253 313 aaKnown RBP2.38□□□□□ -2.03
SDO1YLR022C MCH2P36032 473 aa2.38□□□□□ -2.03
SDO1YLR022C JEN1P36035 616 aa2.38□□□□□ -2.03
SDO1YLR022C HAC1P41546 238 aa2.38□□□□□ -2.03
SDO1YLR022C YJR012CP47087 207 aa2.38□□□□□ -2.03
SDO1YLR022C SOL1P50278 321 aa2.38□□□□□ -2.03
SDO1YLR022C MST27P53176 234 aa2.38□□□□□ -2.03
SDO1YLR022C YDR114CQ04597 100 aa2.38□□□□□ -2.03
SDO1YLR022C CTR3Q06686 241 aa2.38□□□□□ -2.03
SDO1YLR022C TFC7Q12415 435 aa2.38□□□□□ -2.03
SDO1YLR022C PRM4Q12498 284 aa2.38□□□□□ -2.03
SDO1YLR022C YCR024C-BQ3E7Z8 88 aa2.38□□□□□ -2.03
SDO1YLR022C RPS18AP0CX55 146 aaKnown RBP2.37□□□□□ -2.03
SDO1YLR022C RPS18BP0CX56 146 aaPredicted RBP2.37□□□□□ -2.03
SDO1YLR022C INO2P26798 304 aa2.37□□□□□ -2.03
SDO1YLR022C MRPL6P32904 214 aa2.37□□□□□ -2.03
SDO1YLR022C RIB1P38066 345 aa2.37□□□□□ -2.03
SDO1YLR022C EGD2P38879 174 aaKnown RBP2.37□□□□□ -2.03
SDO1YLR022C GAB1P41733 394 aa2.37□□□□□ -2.03
SDO1YLR022C SYF2P53277 215 aaPredicted RBP2.37□□□□□ -2.03
SDO1YLR022C CAB4P53332 305 aa2.37□□□□□ -2.03
SDO1YLR022C VBA1Q04301 562 aa2.37□□□□□ -2.03
SDO1YLR022C MRX9Q07349 420 aaKnown RBP2.37□□□□□ -2.03
SDO1YLR022C MIM1Q08176 113 aa2.37□□□□□ -2.03
SDO1YLR022C SNU23Q12368 194 aaPredicted RBP2.37□□□□□ -2.03
SDO1YLR022C YMR105W-AQ8TGS8 64 aa2.37□□□□□ -2.03
SDO1YLR022C ATP7P30902 174 aa2.36□□□□□ -2.03
SDO1YLR022C FUN26P31381 517 aa2.36□□□□□ -2.03
SDO1YLR022C VPH2P32341 215 aa2.36□□□□□ -2.03
SDO1YLR022C ANR2P36090 516 aaPredicted RBP2.36□□□□□ -2.03
SDO1YLR022C MIC12P38341 106 aa2.36□□□□□ -2.03
SDO1YLR022C LSM12P38828 187 aaKnown RBP2.36□□□□□ -2.03
SDO1YLR022C SOP4P39543 234 aaPredicted RBP2.36□□□□□ -2.03
SDO1YLR022C SEC72P39742 193 aaKnown RBP2.36□□□□□ -2.03
SDO1YLR022C RMD6P39975 231 aa2.36□□□□□ -2.03
SDO1YLR022C YFR035CP43608 114 aa2.36□□□□□ -2.03
SDO1YLR022C YNR062CP53748 327 aa2.36□□□□□ -2.03
SDO1YLR022C GPI17Q04080 534 aa2.36□□□□□ -2.03
SDO1YLR022C HOR7Q05827 59 aa2.36□□□□□ -2.03
SDO1YLR022C SFH1Q06168 426 aa2.36□□□□□ -2.03
SDO1YLR022C HRT1Q08273 121 aa2.36□□□□□ -2.03
SDO1YLR022C YGK3Q12222 375 aaPredicted RBP2.36□□□□□ -2.03
SDO1YLR022C SME1Q12330 94 aaPredicted RBP2.36□□□□□ -2.03
SDO1YLR022C MSW1P04803 379 aa2.35□□□□□ -2.03
SDO1YLR022C RPL23AP0CX41 137 aaKnown RBP2.35□□□□□ -2.03
SDO1YLR022C RPL23BP0CX42 137 aaKnown RBP2.35□□□□□ -2.03
SDO1YLR022C YMR31P19955 123 aa2.35□□□□□ -2.03
SDO1YLR022C POF1P25576 258 aa2.35□□□□□ -2.03
SDO1YLR022C IDH1P28834 360 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
SDO1YLR022C LDS1P31379 325 aa2.35□□□□□ -2.03
SDO1YLR022C UTR5P32630 166 aa2.35□□□□□ -2.03
SDO1YLR022C PDC2P32896 925 aa2.35□□□□□ -2.03
SDO1YLR022C SPT4P32914 102 aaPredicted RBP2.35□□□□□ -2.03
SDO1YLR022C LHP1P33399 275 aaKnown RBP2.35□□□□□ -2.03
SDO1YLR022C CBT1P36038 271 aaPredicted RBP2.35□□□□□ -2.03
SDO1YLR022C FZO1P38297 855 aa2.35□□□□□ -2.03
SDO1YLR022C CIN2P46670 268 aa2.35□□□□□ -2.03
SDO1YLR022C LCB3P47013 409 aa2.35□□□□□ -2.03
SDO1YLR022C VPS55P47111 140 aa2.35□□□□□ -2.03
SDO1YLR022C USE1P53146 245 aa2.35□□□□□ -2.03
SDO1YLR022C RCF2P53721 224 aa2.35□□□□□ -2.03
SDO1YLR022C RNH201P53942 307 aa2.35□□□□□ -2.03
SDO1YLR022C GIM5Q04493 163 aa2.35□□□□□ -2.03
SDO1YLR022C YHC1Q05900 231 aaKnown RBP2.35□□□□□ -2.03
SDO1YLR022C YPR098CQ06089 161 aa2.35□□□□□ -2.03
SDO1YLR022C YPR127WQ06494 345 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 639.7 ms