RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C SEC14P24280 304 aaKnown RBP0.94□□□□□ -2.26
RPL40BYKR094C YCR090CP25654 182 aaKnown RBP0.94□□□□□ -2.26
RPL40BYKR094C YET1P35723 206 aa0.94□□□□□ -2.26
RPL40BYKR094C YOR062CP36025 268 aa0.94□□□□□ -2.26
RPL40BYKR094C UTP30P36144 274 aaKnown RBP0.94□□□□□ -2.26
RPL40BYKR094C MRPL17P36528 281 aa0.94□□□□□ -2.26
RPL40BYKR094C PHO88P38264 188 aaPredicted RBP0.94□□□□□ -2.26
RPL40BYKR094C SRP14P38985 146 aa0.94□□□□□ -2.26
RPL40BYKR094C AVT2P39981 480 aa0.94□□□□□ -2.26
RPL40BYKR094C GVP36P40531 326 aaKnown RBP0.94□□□□□ -2.26
RPL40BYKR094C YKE4P40544 346 aa0.94□□□□□ -2.26
RPL40BYKR094C NRK1P53915 240 aa0.94□□□□□ -2.26
RPL40BYKR094C DAD3P69850 94 aa0.94□□□□□ -2.26
RPL40BYKR094C PET191Q02772 108 aa0.94□□□□□ -2.26
RPL40BYKR094C SNO1Q03144 224 aa0.94□□□□□ -2.26
RPL40BYKR094C YDR249CQ03787 373 aa0.94□□□□□ -2.26
RPL40BYKR094C MRPS8Q03799 155 aa0.94□□□□□ -2.26
RPL40BYKR094C TRM12Q04235 462 aa0.94□□□□□ -2.26
RPL40BYKR094C HNT1Q04344 158 aaKnown RBP0.94□□□□□ -2.26
RPL40BYKR094C GRX8Q05926 109 aa0.94□□□□□ -2.26
RPL40BYKR094C ARR2Q06597 130 aa0.94□□□□□ -2.26
RPL40BYKR094C MEU1Q07938 337 aaKnown RBP RIP-Chip data0.94□□□□□ -2.26not detected
RPL40BYKR094C DGA1Q08650 418 aa0.94□□□□□ -2.26
RPL40BYKR094C YOR283WQ12040 230 aaKnown RBP0.94□□□□□ -2.26
RPL40BYKR094C USB1Q12208 290 aaKnown RBP0.94□□□□□ -2.26
RPL40BYKR094C MET5P47169 1442 aa0.94□□□□□ -2.26
RPL40BYKR094C CPA1P07258 411 aaKnown RBP0.93□□□□□ -2.26
RPL40BYKR094C GCY1P14065 312 aaKnown RBP RIP-Chip data0.93□□□□□ -2.26not detected
RPL40BYKR094C MEI4P29467 408 aa0.93□□□□□ -2.26
RPL40BYKR094C SEC17P32602 292 aa0.93□□□□□ -2.26
RPL40BYKR094C UMP1P38293 148 aa0.93□□□□□ -2.26
RPL40BYKR094C YBR285WP38354 144 aa0.93□□□□□ -2.26
RPL40BYKR094C CTR2P38865 189 aa0.93□□□□□ -2.26
RPL40BYKR094C YHR180WP38868 163 aa0.93□□□□□ -2.26
RPL40BYKR094C TVP23P38962 199 aa0.93□□□□□ -2.26
RPL40BYKR094C POG1P40473 351 aa0.93□□□□□ -2.26
RPL40BYKR094C ICE2P40499 491 aa0.93□□□□□ -2.26
RPL40BYKR094C TIR3P40552 269 aa0.93□□□□□ -2.26
RPL40BYKR094C PRM10P42946 383 aa0.93□□□□□ -2.26
RPL40BYKR094C SMD3P43321 101 aaKnown RBP0.93□□□□□ -2.26
RPL40BYKR094C JAC1P53193 184 aa0.93□□□□□ -2.26
RPL40BYKR094C YNL184CP53876 108 aa0.93□□□□□ -2.26
RPL40BYKR094C YDR274CP87283 123 aa0.93□□□□□ -2.26
RPL40BYKR094C AIM34Q03673 198 aa0.93□□□□□ -2.26
RPL40BYKR094C PLP1Q04004 230 aa0.93□□□□□ -2.26
RPL40BYKR094C GIM5Q04493 163 aa0.93□□□□□ -2.26
RPL40BYKR094C MCP1Q12106 302 aa0.93□□□□□ -2.26
RPL40BYKR094C PEX11Q12462 236 aa0.93□□□□□ -2.26
RPL40BYKR094C PET9P18239 318 aaKnown RBP0.92□□□□□ -2.26
RPL40BYKR094C CNB1P25296 175 aa0.92□□□□□ -2.26
RPL40BYKR094C MGT1P26188 188 aa0.92□□□□□ -2.26
RPL40BYKR094C ECM4P36156 370 aa0.92□□□□□ -2.26
RPL40BYKR094C YHR022CP38763 256 aa0.92□□□□□ -2.26
RPL40BYKR094C LSM4P40070 187 aaKnown RBP0.92□□□□□ -2.26
RPL40BYKR094C YER134CP40081 178 aa0.92□□□□□ -2.26
RPL40BYKR094C YNL217WP40152 326 aa0.92□□□□□ -2.26
RPL40BYKR094C FMP32P43557 207 aa0.92□□□□□ -2.26
RPL40BYKR094C SAY1P53324 424 aa0.92□□□□□ -2.26
RPL40BYKR094C YNR062CP53748 327 aa0.92□□□□□ -2.26
RPL40BYKR094C CYT2Q00873 224 aa0.92□□□□□ -2.26
RPL40BYKR094C NUP49Q02199 472 aa0.92□□□□□ -2.26
RPL40BYKR094C YMR295CQ03559 197 aa0.92□□□□□ -2.26
RPL40BYKR094C CGI121Q03705 181 aaKnown RBP0.92□□□□□ -2.26
RPL40BYKR094C SPG3Q04398 127 aaPredicted RBP0.92□□□□□ -2.26
RPL40BYKR094C DYN3Q04949 312 aa0.92□□□□□ -2.26
RPL40BYKR094C SHH4Q06236 168 aa0.92□□□□□ -2.26
RPL40BYKR094C BRX1Q08235 291 aaKnown RBP0.92□□□□□ -2.26
RPL40BYKR094C GRE1Q08969 168 aa0.92□□□□□ -2.26
RPL40BYKR094C QCR2P07257 368 aa0.91□□□□□ -2.26
RPL40BYKR094C NSP1P14907 823 aaKnown RBP0.91□□□□□ -2.26
RPL40BYKR094C SCL1P21243 252 aaKnown RBP0.91□□□□□ -2.26
RPL40BYKR094C ATP15P21306 62 aa0.91□□□□□ -2.26
RPL40BYKR094C PAN3P36102 679 aaPredicted RBP0.91□□□□□ -2.26
RPL40BYKR094C YBR209WP38311 105 aa0.91□□□□□ -2.26
RPL40BYKR094C DSE2P38844 325 aa0.91□□□□□ -2.26
RPL40BYKR094C YEA4P40004 342 aa0.91□□□□□ -2.26
RPL40BYKR094C FCY21P40039 528 aa0.91□□□□□ -2.26
RPL40BYKR094C AGE2P40529 298 aa0.91□□□□□ -2.26
RPL40BYKR094C ERG10P41338 398 aaKnown RBP0.91□□□□□ -2.26
RPL40BYKR094C SKI6P46948 246 aaPredicted RBP0.91□□□□□ -2.26
RPL40BYKR094C ARP3P47117 449 aaKnown RBP0.91□□□□□ -2.26
RPL40BYKR094C DAN1P47178 298 aa0.91□□□□□ -2.26
RPL40BYKR094C ARO8P53090 500 aaKnown RBP0.91□□□□□ -2.26
RPL40BYKR094C YIP3P53633 176 aa0.91□□□□□ -2.26
RPL40BYKR094C YLR460CP54007 376 aa0.91□□□□□ -2.26
RPL40BYKR094C GRX5Q02784 150 aa0.91□□□□□ -2.26
RPL40BYKR094C MAK3Q03503 176 aa0.91□□□□□ -2.26
RPL40BYKR094C ARO80Q04052 950 aa0.91□□□□□ -2.26
RPL40BYKR094C YOL014WQ08110 124 aa0.91□□□□□ -2.26
RPL40BYKR094C YOR342CQ12182 319 aa0.91□□□□□ -2.26
RPL40BYKR094C BOL1Q3E793 110 aa0.91□□□□□ -2.26
RPL40BYKR094C YML100W-AQ8TGT0 57 aa0.91□□□□□ -2.26
RPL40BYKR094C ODC2Q99297 307 aa0.91□□□□□ -2.26
RPL40BYKR094C CMD1P06787 147 aaKnown RBP0.9□□□□□ -2.27
RPL40BYKR094C MDH2P22133 377 aa0.9□□□□□ -2.27
RPL40BYKR094C RAD51P25454 400 aa0.9□□□□□ -2.27
RPL40BYKR094C AHC2P25649 128 aa0.9□□□□□ -2.27
RPL40BYKR094C OCH1P31755 480 aa0.9□□□□□ -2.27
RPL40BYKR094C TFC1P32367 649 aa0.9□□□□□ -2.27
RPL40BYKR094C FZF1P32805 299 aa0.9□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 110.9 ms