RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT1	YKL145W	CUP1-2	P0CX81	61 aa		4.7	□□□□□ -1.66
RPT1	YKL145W	BUD23	P25627	275 aa	Predicted RBP	4.7	□□□□□ -1.66
RPT1	YKL145W	POP5	P28005	173 aa		4.7	□□□□□ -1.66
RPT1	YKL145W	YBL010C	P32788	280 aa		4.7	□□□□□ -1.66
RPT1	YKL145W	YBR096W	P38256	230 aa		4.7	□□□□□ -1.66
RPT1	YKL145W	YER084W	P40057	128 aa		4.7	□□□□□ -1.66
RPT1	YKL145W	AIM24	P47127	394 aa		4.7	□□□□□ -1.66
RPT1	YKL145W	AIM25	P47140	327 aa		4.7	□□□□□ -1.66
RPT1	YKL145W	AVT4	P50944	713 aa		4.7	□□□□□ -1.66
RPT1	YKL145W	ATP23	P53722	227 aa		4.7	□□□□□ -1.66
RPT1	YKL145W	GAT3	Q07928	141 aa		4.7	□□□□□ -1.66
RPT1	YKL145W	YLR031W	Q07978	186 aa		4.7	□□□□□ -1.66
RPT1	YKL145W	FIT3	Q08907	204 aa		4.7	□□□□□ -1.66
RPT1	YKL145W	TPT1	Q12272	230 aa	Known RBP	4.7	□□□□□ -1.66
RPT1	YKL145W	SPS2	P08459	502 aa		4.69	□□□□□ -1.66
RPT1	YKL145W	GRX2	P17695	143 aa	Known RBP	4.69	□□□□□ -1.66
RPT1	YKL145W	YCP4	P25349	247 aa	Known RBP	4.69	□□□□□ -1.66
RPT1	YKL145W	ATG22	P25568	528 aa		4.69	□□□□□ -1.66
RPT1	YKL145W	ACB1	P31787	87 aa		4.69	□□□□□ -1.66
RPT1	YKL145W	CLG1	P35190	452 aa		4.69	□□□□□ -1.66
RPT1	YKL145W	AIM29	P36154	155 aa		4.69	□□□□□ -1.66
RPT1	YKL145W	UMP1	P38293	148 aa		4.69	□□□□□ -1.66
RPT1	YKL145W	YBR242W	P38331	238 aa		4.69	□□□□□ -1.66
RPT1	YKL145W	YND1	P40009	630 aa		4.69	□□□□□ -1.66
RPT1	YKL145W	SYS1	P41544	203 aa		4.69	□□□□□ -1.66
RPT1	YKL145W	YCH1	P42937	148 aa		4.69	□□□□□ -1.66
RPT1	YKL145W	QRI1	P43123	477 aa	Known RBP	4.69	□□□□□ -1.66
RPT1	YKL145W	GWT1	P47026	490 aa		4.69	□□□□□ -1.66
RPT1	YKL145W	SIP18	P50263	79 aa		4.69	□□□□□ -1.66
RPT1	YKL145W	BER1	Q06688	274 aa	Known RBP	4.69	□□□□□ -1.66
RPT1	YKL145W	PAM18	Q07914	168 aa		4.69	□□□□□ -1.66
RPT1	YKL145W	RPL35A	P0CX84	120 aa	Known RBP	4.68	□□□□□ -1.66
RPT1	YKL145W	RPL35B	P0CX85	120 aa	Known RBP	4.68	□□□□□ -1.66
RPT1	YKL145W	RPL30	P14120	105 aa	Known RBP	4.68	□□□□□ -1.66
RPT1	YKL145W	GCN3	P14741	305 aa		4.68	□□□□□ -1.66
RPT1	YKL145W	URA6	P15700	204 aa		4.68	□□□□□ -1.66
RPT1	YKL145W	FUS3	P16892	353 aa	Known RBP	4.68	□□□□□ -1.66
RPT1	YKL145W	PPZ2	P33329	710 aa		4.68	□□□□□ -1.66
RPT1	YKL145W	YNK1	P36010	153 aa	Known RBP	4.68	□□□□□ -1.66
RPT1	YKL145W	MCH2	P36032	473 aa		4.68	□□□□□ -1.66
RPT1	YKL145W	PRS4	P38063	326 aa	Predicted RBP	4.68	□□□□□ -1.66
RPT1	YKL145W	FLX1	P40464	311 aa		4.68	□□□□□ -1.66
RPT1	YKL145W	AVT7	P40501	490 aa		4.68	□□□□□ -1.66
RPT1	YKL145W	YPL077C	Q02831	240 aa		4.68	□□□□□ -1.66
RPT1	YKL145W	HNT1	Q04344	158 aa	Known RBP	4.68	□□□□□ -1.66
RPT1	YKL145W	SDO1	Q07953	250 aa	Known RBP	4.68	□□□□□ -1.66
RPT1	YKL145W	TIM18	Q08749	192 aa		4.68	□□□□□ -1.66
RPT1	YKL145W	RDI1	Q12434	202 aa		4.68	□□□□□ -1.66
RPT1	YKL145W	REP2	P03872	296 aa		4.67	□□□□□ -1.66
RPT1	YKL145W	RNA14	P25298	677 aa	Known RBP	4.67	□□□□□ -1.66
RPT1	YKL145W	YKL063C	P35725	167 aa		4.67	□□□□□ -1.66
RPT1	YKL145W	MRPL3	P36516	390 aa		4.67	□□□□□ -1.66
RPT1	YKL145W	FIG1	P38224	298 aa		4.67	□□□□□ -1.66
RPT1	YKL145W	SEN34	P39707	275 aa		4.67	□□□□□ -1.66
RPT1	YKL145W	YFL051C	P43552	160 aa		4.67	□□□□□ -1.66
RPT1	YKL145W	KEG1	P43614	200 aa		4.67	□□□□□ -1.66
RPT1	YKL145W	HHT1	P61830	136 aa		4.67	□□□□□ -1.66
RPT1	YKL145W	HUT1	Q12520	339 aa		4.67	□□□□□ -1.66
RPT1	YKL145W	TOR1	P35169	2470 aa		4.67	□□□□□ -1.66
RPT1	YKL145W	MSI1	P13712	422 aa		4.66	□□□□□ -1.66
RPT1	YKL145W	GLC7	P32598	312 aa	Known RBP	4.66	□□□□□ -1.66
RPT1	YKL145W	AGA2	P32781	87 aa		4.66	□□□□□ -1.66
RPT1	YKL145W	CLB6	P32943	380 aa		4.66	□□□□□ -1.66
RPT1	YKL145W	OST1	P41543	476 aa	Known RBP	4.66	□□□□□ -1.66
RPT1	YKL145W	YGR210C	P42942	411 aa		4.66	□□□□□ -1.66
RPT1	YKL145W	NSA1	P53136	463 aa	Predicted RBP	4.66	□□□□□ -1.66
RPT1	YKL145W	RSM27	P53305	110 aa		4.66	□□□□□ -1.66
RPT1	YKL145W	YPL080C	Q02826	108 aa		4.66	□□□□□ -1.66
RPT1	YKL145W	YDR391C	Q04170	232 aa		4.66	□□□□□ -1.66
RPT1	YKL145W	API2	Q04413	109 aa		4.66	□□□□□ -1.66
RPT1	YKL145W	MRX9	Q07349	420 aa	Known RBP	4.66	□□□□□ -1.66
RPT1	YKL145W	PBP4	Q07362	185 aa	Known RBP	4.66	□□□□□ -1.66
RPT1	YKL145W	RFU1	Q08003	200 aa		4.66	□□□□□ -1.66
RPT1	YKL145W	USB1	Q12208	290 aa	Known RBP	4.66	□□□□□ -1.66
RPT1	YKL145W	SWD2	P36104	329 aa	Predicted RBP	4.65	□□□□□ -1.66
RPT1	YKL145W	ARC40	P38328	384 aa	Known RBP	4.65	□□□□□ -1.66
RPT1	YKL145W	GEP4	P38812	185 aa		4.65	□□□□□ -1.66
RPT1	YKL145W	MST28	P39552	234 aa		4.65	□□□□□ -1.66
RPT1	YKL145W	HAM1	P47119	197 aa	Known RBP	4.65	□□□□□ -1.66
RPT1	YKL145W	UBC13	P52490	153 aa		4.65	□□□□□ -1.66
RPT1	YKL145W	UFD1	P53044	361 aa		4.65	□□□□□ -1.66
RPT1	YKL145W	MRPS16	Q02608	121 aa		4.65	□□□□□ -1.66
RPT1	YKL145W	VBA1	Q04301	562 aa		4.65	□□□□□ -1.66
RPT1	YKL145W	ADH6	Q04894	360 aa	Known RBP	4.65	□□□□□ -1.66
RPT1	YKL145W	RTT103	Q05543	409 aa		4.65	□□□□□ -1.66
RPT1	YKL145W	BLM10	P43583	2143 aa		4.65	□□□□□ -1.67
RPT1	YKL145W	TRA1	P38811	3744 aa		4.65	□□□□□ -1.67
RPT1	YKL145W	NHP6B	P11633	99 aa	Known RBP	4.64	□□□□□ -1.67
RPT1	YKL145W	FMT1	P32785	401 aa		4.64	□□□□□ -1.67
RPT1	YKL145W	TIR2	P33890	251 aa		4.64	□□□□□ -1.67
RPT1	YKL145W	PAN3	P36102	679 aa	Predicted RBP	4.64	□□□□□ -1.67
RPT1	YKL145W	SRL3	P36167	246 aa		4.64	□□□□□ -1.67
RPT1	YKL145W	MRPL27	P36526	146 aa	Predicted RBP	4.64	□□□□□ -1.67
RPT1	YKL145W	YIL029C	P40538	142 aa		4.64	□□□□□ -1.67
RPT1	YKL145W	RRS1	Q08746	203 aa	Known RBP	4.64	□□□□□ -1.67
RPT1	YKL145W	YLR108C	Q12259	485 aa		4.64	□□□□□ -1.67
RPT1	YKL145W	EAF3	Q12432	401 aa		4.64	□□□□□ -1.67
RPT1	YKL145W	SEC16	P48415	2195 aa	Known RBP	4.64	□□□□□ -1.67
RPT1	YKL145W	GCN1	P33892	2672 aa	Known RBP	4.64	□□□□□ -1.67
RPT1	YKL145W	CDC28	P00546	298 aa	Known RBP	4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms