RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C PAU1P0CE88 120 aa3.04□□□□□ -1.92
SSM4YIL030C PAU14P0CE89 120 aa3.04□□□□□ -1.92
SSM4YIL030C PAU6P0CE90 120 aa3.04□□□□□ -1.92
SSM4YIL030C PAU18P0CE91 120 aa3.04□□□□□ -1.92
SSM4YIL030C PAU8P0CE92 120 aa3.04□□□□□ -1.92
SSM4YIL030C PAU11P0CE93 120 aa3.04□□□□□ -1.92
SSM4YIL030C DAT1P13483 248 aaKnown RBP3.04□□□□□ -1.92
SSM4YIL030C DAL82P21705 255 aa3.04□□□□□ -1.92
SSM4YIL030C URK1P27515 501 aa3.04□□□□□ -1.92
SSM4YIL030C OCH1P31755 480 aa3.04□□□□□ -1.92
SSM4YIL030C PAU13P38725 120 aa3.04□□□□□ -1.92
SSM4YIL030C RTC3P38804 111 aaPredicted RBP3.04□□□□□ -1.92
SSM4YIL030C RPS26AP39938 119 aaKnown RBP3.04□□□□□ -1.92
SSM4YIL030C YNR066CP53752 436 aa3.04□□□□□ -1.92
SSM4YIL030C SNP1Q00916 300 aaPredicted RBP3.04□□□□□ -1.92
SSM4YIL030C PAU10Q03050 120 aa3.04□□□□□ -1.92
SSM4YIL030C YOL029CQ08187 201 aa3.04□□□□□ -1.92
SSM4YIL030C PAU20Q08322 120 aa3.04□□□□□ -1.92
SSM4YIL030C MPD1Q12404 318 aaKnown RBP3.04□□□□□ -1.92
SSM4YIL030C PAU9Q3E770 120 aa3.04□□□□□ -1.92
SSM4YIL030C YHR214C-EQ8TGK0 99 aa3.04□□□□□ -1.92
SSM4YIL030C HIS5P07172 385 aa3.03□□□□□ -1.92
SSM4YIL030C ERS1P17261 260 aa3.03□□□□□ -1.92
SSM4YIL030C CPT1P17898 393 aa3.03□□□□□ -1.92
SSM4YIL030C YBL059WP34224 193 aa3.03□□□□□ -1.92
SSM4YIL030C SRP102P36057 244 aaPredicted RBP3.03□□□□□ -1.92
SSM4YIL030C CMC1P36064 111 aa3.03□□□□□ -1.92
SSM4YIL030C FRM2P37261 193 aa3.03□□□□□ -1.92
SSM4YIL030C TRM7P38238 310 aaKnown RBP3.03□□□□□ -1.92
SSM4YIL030C PEX7P39108 375 aa3.03□□□□□ -1.92
SSM4YIL030C RTS2P40962 232 aa3.03□□□□□ -1.92
SSM4YIL030C HIT1P46973 164 aa3.03□□□□□ -1.92
SSM4YIL030C DUG3P53871 357 aa3.03□□□□□ -1.92
SSM4YIL030C LRS4Q04087 347 aaKnown RBP3.03□□□□□ -1.92
SSM4YIL030C HMRA1P0CY11 126 aa3.03□□□□□ -1.92
SSM4YIL030C IDH2P28241 369 aaKnown RBP3.03□□□□□ -1.92
SSM4YIL030C YGL015CP33199 130 aa3.03□□□□□ -1.92
SSM4YIL030C SSS1P35179 80 aa3.03□□□□□ -1.92
SSM4YIL030C PRS4P38063 326 aaPredicted RBP3.03□□□□□ -1.92
SSM4YIL030C MIX23P38162 196 aa3.03□□□□□ -1.92
SSM4YIL030C YMR262WP38430 313 aa3.03□□□□□ -1.92
SSM4YIL030C MRPL19P53875 158 aa3.03□□□□□ -1.92
SSM4YIL030C YJR112W-AQ3E743 109 aa3.03□□□□□ -1.92
SSM4YIL030C POR1P04840 283 aaKnown RBP3.03□□□□□ -1.92
SSM4YIL030C NNK1P36003 928 aa3.03□□□□□ -1.92
SSM4YIL030C VPS51P36116 164 aa3.03□□□□□ -1.92
SSM4YIL030C GLE2P40066 365 aa3.03□□□□□ -1.92
SSM4YIL030C FMP10P40098 244 aa3.03□□□□□ -1.92
SSM4YIL030C YNL208WP40159 199 aaKnown RBP3.03□□□□□ -1.92
SSM4YIL030C VPS28Q02767 242 aa3.03□□□□□ -1.92
SSM4YIL030C TRS23Q03784 219 aa3.03□□□□□ -1.92
SSM4YIL030C YDR444WQ04093 687 aa3.03□□□□□ -1.92
SSM4YIL030C HRD1Q08109 551 aa3.03□□□□□ -1.92
SSM4YIL030C YCR024C-BQ3E7Z8 88 aa3.03□□□□□ -1.92
SSM4YIL030C MIA40P36046 403 aa3.02□□□□□ -1.93
SSM4YIL030C YKR073CP36153 106 aa3.02□□□□□ -1.93
SSM4YIL030C QDR3P38227 689 aa3.02□□□□□ -1.93
SSM4YIL030C ECM34P38728 170 aa3.02□□□□□ -1.93
SSM4YIL030C SDP1P40479 209 aa3.02□□□□□ -1.93
SSM4YIL030C YGL230CP53074 147 aa3.02□□□□□ -1.93
SSM4YIL030C CTF19Q02732 369 aa3.02□□□□□ -1.93
SSM4YIL030C YRA1Q12159 226 aaKnown RBP3.02□□□□□ -1.93
SSM4YIL030C POM33Q12164 279 aa3.02□□□□□ -1.93
SSM4YIL030C COX10P21592 462 aa3.02□□□□□ -1.93
SSM4YIL030C TEM1P38987 245 aa3.02□□□□□ -1.93
SSM4YIL030C STD1Q02794 444 aa3.02□□□□□ -1.93
SSM4YIL030C YML096WQ04489 525 aa3.02□□□□□ -1.93
SSM4YIL030C ALK2P32789 676 aaPredicted RBP3.02□□□□□ -1.93
SSM4YIL030C OYE3P41816 400 aaPredicted RBP3.02□□□□□ -1.93
SSM4YIL030C RSM7P47150 247 aa3.02□□□□□ -1.93
SSM4YIL030C NUP42P49686 430 aaKnown RBP3.02□□□□□ -1.93
SSM4YIL030C COG7P53195 279 aa3.02□□□□□ -1.93
SSM4YIL030C RRT7Q07829 113 aa3.02□□□□□ -1.93
SSM4YIL030C FIT3Q08907 204 aa3.02□□□□□ -1.93
SSM4YIL030C YOR114WQ12219 294 aa3.02□□□□□ -1.93
SSM4YIL030C SEC11P15367 167 aa3.02□□□□□ -1.93
SSM4YIL030C PDX1P16451 410 aa3.02□□□□□ -1.93
SSM4YIL030C EHT1P38295 451 aa3.02□□□□□ -1.93
SSM4YIL030C NSA2P40078 261 aaKnown RBP3.02□□□□□ -1.93
SSM4YIL030C YJL016WP47072 561 aa3.02□□□□□ -1.93
SSM4YIL030C MIC27P50945 234 aa3.02□□□□□ -1.93
SSM4YIL030C HRI1Q05905 244 aaKnown RBP3.02□□□□□ -1.93
SSM4YIL030C MRP49P32388 137 aa3.01□□□□□ -1.93
SSM4YIL030C YBR184WP38299 523 aa3.01□□□□□ -1.93
SSM4YIL030C PGU1P47180 361 aa3.01□□□□□ -1.93
SSM4YIL030C MGR2Q02889 113 aa3.01□□□□□ -1.93
SSM4YIL030C ADD37Q03233 198 aa3.01□□□□□ -1.93
SSM4YIL030C IZH3Q07959 543 aa3.01□□□□□ -1.93
SSM4YIL030C THI72Q08579 599 aa3.01□□□□□ -1.93
SSM4YIL030C RAD23P32628 398 aaKnown RBP3.01□□□□□ -1.93
SSM4YIL030C ELO1P39540 310 aa3.01□□□□□ -1.93
SSM4YIL030C UIP3P39547 235 aa3.01□□□□□ -1.93
SSM4YIL030C SEC24P40482 926 aaKnown RBP3.01□□□□□ -1.93
SSM4YIL030C ALG12P53730 551 aa3.01□□□□□ -1.93
SSM4YIL030C BOR1P53838 576 aa3.01□□□□□ -1.93
SSM4YIL030C YDL129WQ07555 291 aa3.01□□□□□ -1.93
SSM4YIL030C COX1P00401 534 aa3.01□□□□□ -1.93
SSM4YIL030C DUT1P33317 147 aa3.01□□□□□ -1.93
SSM4YIL030C YNK1P36010 153 aaKnown RBP3.01□□□□□ -1.93
SSM4YIL030C AQR1P53943 586 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 93.5 ms