RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W PRY2P36110 329 aa4.51□□□□□ -1.69
UBP9YER098W TRR2P38816 342 aa4.51□□□□□ -1.69
UBP9YER098W YIP1P53039 248 aa4.51□□□□□ -1.69
UBP9YER098W SSU72P53538 206 aaPredicted RBP4.51□□□□□ -1.69
UBP9YER098W TRM44Q02648 567 aaKnown RBP4.51□□□□□ -1.69
UBP9YER098W GRX8Q05926 109 aa4.51□□□□□ -1.69
UBP9YER098W ATG39Q06159 398 aa4.51□□□□□ -1.69
UBP9YER098W PEX30Q06169 523 aa4.51□□□□□ -1.69
UBP9YER098W YLL053CP0CD98 152 aa4.5□□□□□ -1.69
UBP9YER098W PUT3P25502 979 aaPredicted RBP4.5□□□□□ -1.69
UBP9YER098W STP22P25604 385 aa4.5□□□□□ -1.69
UBP9YER098W SUA7P29055 345 aaPredicted RBP4.5□□□□□ -1.69
UBP9YER098W ALK2P32789 676 aaPredicted RBP4.5□□□□□ -1.69
UBP9YER098W YCR041WP37265 110 aa4.5□□□□□ -1.69
UBP9YER098W YBR220CP38318 560 aa4.5□□□□□ -1.69
UBP9YER098W CUE1P38428 203 aa4.5□□□□□ -1.69
UBP9YER098W MET30P39014 640 aa4.5□□□□□ -1.69
UBP9YER098W YEL073CP39974 107 aa4.5□□□□□ -1.69
UBP9YER098W CIN2P46670 268 aa4.5□□□□□ -1.69
UBP9YER098W TRM9P49957 279 aa4.5□□□□□ -1.69
UBP9YER098W YNL260CP53846 198 aa4.5□□□□□ -1.69
UBP9YER098W INP1Q03694 420 aa4.5□□□□□ -1.69
UBP9YER098W NAT4Q04751 285 aa4.5□□□□□ -1.69
UBP9YER098W YOR385WQ08909 290 aa4.5□□□□□ -1.69
UBP9YER098W YDR262WQ12331 272 aa4.5□□□□□ -1.69
UBP9YER098W ODC2Q99297 307 aa4.5□□□□□ -1.69
UBP9YER098W PAU19P0CE85 124 aa4.49□□□□□ -1.69
UBP9YER098W PAU21P0CE86 164 aa4.49□□□□□ -1.69
UBP9YER098W PAU22P0CE87 164 aa4.49□□□□□ -1.69
UBP9YER098W MRS4P23500 304 aa4.49□□□□□ -1.69
UBP9YER098W LSB5P25369 354 aa4.49□□□□□ -1.69
UBP9YER098W PAU3P25610 124 aa4.49□□□□□ -1.69
UBP9YER098W RAD23P32628 398 aaKnown RBP4.49□□□□□ -1.69
UBP9YER098W KKQ8P36004 724 aa4.49□□□□□ -1.69
UBP9YER098W RPL14AP36105 138 aaKnown RBP4.49□□□□□ -1.69
UBP9YER098W RPL14BP38754 138 aaKnown RBP4.49□□□□□ -1.69
UBP9YER098W FLO5P38894 1075 aa4.49□□□□□ -1.69
UBP9YER098W SUR2P38992 349 aa4.49□□□□□ -1.69
UBP9YER098W LYS12P40495 371 aaKnown RBP4.49□□□□□ -1.69
UBP9YER098W TOS2P50078 622 aa4.49□□□□□ -1.69
UBP9YER098W YGL262WP53054 175 aa4.49□□□□□ -1.69
UBP9YER098W FLC3P53121 802 aa4.49□□□□□ -1.69
UBP9YER098W YGR015CP53208 328 aa4.49□□□□□ -1.69
UBP9YER098W YCT1Q12235 531 aa4.49□□□□□ -1.69
UBP9YER098W YLR118CQ12354 227 aa4.49□□□□□ -1.69
UBP9YER098W ORT1Q12375 292 aa4.49□□□□□ -1.69
UBP9YER098W YPR096CO13587 100 aa4.49□□□□□ -1.69
UBP9YER098W QCR7P00128 127 aa4.49□□□□□ -1.69
UBP9YER098W NOP1P15646 327 aaKnown RBP4.49□□□□□ -1.69
UBP9YER098W BGL2P15703 313 aaKnown RBP4.49□□□□□ -1.69
UBP9YER098W MEK1P24719 497 aaPredicted RBP4.49□□□□□ -1.69
UBP9YER098W PPZ2P33329 710 aa4.49□□□□□ -1.69
UBP9YER098W MRPS9P38120 278 aa4.49□□□□□ -1.69
UBP9YER098W LSM2P38203 95 aaKnown RBP4.49□□□□□ -1.69
UBP9YER098W POP8P38208 133 aa4.49□□□□□ -1.69
UBP9YER098W TRM112P53738 135 aaPredicted RBP4.49□□□□□ -1.69
UBP9YER098W PIN3Q06449 215 aa4.49□□□□□ -1.69
UBP9YER098W ATG10Q07879 167 aa4.49□□□□□ -1.69
UBP9YER098W TPO4Q12256 659 aa4.49□□□□□ -1.69
UBP9YER098W ERV2Q12284 196 aa4.49□□□□□ -1.69
UBP9YER098W SAL1D6W196 494 aa4.48□□□□□ -1.69
UBP9YER098W RPS16AP0CX51 143 aaKnown RBP4.48□□□□□ -1.69
UBP9YER098W RPS16BP0CX52 143 aaKnown RBP4.48□□□□□ -1.69
UBP9YER098W TRX3P25372 127 aa4.48□□□□□ -1.69
UBP9YER098W TCA17P32613 152 aa4.48□□□□□ -1.69
UBP9YER098W LYS1P38998 373 aaRIP-Chip data4.48□□□□□ -1.69not detected
UBP9YER098W AZF1P41696 914 aa4.48□□□□□ -1.69
UBP9YER098W IKS1P47042 667 aa4.48□□□□□ -1.69
UBP9YER098W YGR017WP53210 297 aa4.48□□□□□ -1.69
UBP9YER098W ERP1Q05359 219 aaKnown RBP4.48□□□□□ -1.69
UBP9YER098W LDS2Q08218 356 aa4.48□□□□□ -1.69
UBP9YER098W WIP1Q2V2P8 89 aa4.48□□□□□ -1.69
UBP9YER098W Q0144Q9ZZW2 109 aa4.48□□□□□ -1.69
UBP9YER098W CPR1P14832 162 aaKnown RBP4.48□□□□□ -1.69
UBP9YER098W RPF1P38805 295 aaKnown RBP4.48□□□□□ -1.69
UBP9YER098W IRC22P40006 225 aa4.48□□□□□ -1.69
UBP9YER098W SPC25P40014 221 aa4.48□□□□□ -1.69
UBP9YER098W DLS1P40366 167 aa4.48□□□□□ -1.69
UBP9YER098W PAU5P43575 122 aa4.48□□□□□ -1.69
UBP9YER098W YAR1P46683 200 aa4.48□□□□□ -1.69
UBP9YER098W BAT2P47176 376 aaKnown RBP4.48□□□□□ -1.69
UBP9YER098W MIC26P50087 233 aa4.48□□□□□ -1.69
UBP9YER098W DIG2Q03373 323 aaKnown RBP4.48□□□□□ -1.69
UBP9YER098W IZH1Q03419 316 aa4.48□□□□□ -1.69
UBP9YER098W YMR321CQ04898 105 aa4.48□□□□□ -1.69
UBP9YER098W SNA4Q07549 140 aa4.48□□□□□ -1.69
UBP9YER098W AHC1Q12433 566 aa4.48□□□□□ -1.69
UBP9YER098W SLO1Q3E784 85 aa4.48□□□□□ -1.69
UBP9YER098W YOR338WQ99326 363 aa4.48□□□□□ -1.69
UBP9YER098W YOL162WP0CF19 215 aa4.47□□□□□ -1.69
UBP9YER098W RPL18AP0CX49 186 aaKnown RBP4.47□□□□□ -1.69
UBP9YER098W RPL18BP0CX50 186 aaKnown RBP4.47□□□□□ -1.69
UBP9YER098W ARF1P11076 181 aaKnown RBP4.47□□□□□ -1.69
UBP9YER098W MGM101P32787 269 aaKnown RBP4.47□□□□□ -1.69
UBP9YER098W PRP18P33411 251 aaPredicted RBP4.47□□□□□ -1.69
UBP9YER098W RPA43P46669 326 aa4.47□□□□□ -1.69
UBP9YER098W YDL186WP48568 277 aa4.47□□□□□ -1.69
UBP9YER098W THG1P53215 237 aaKnown RBP4.47□□□□□ -1.69
UBP9YER098W YNL184CP53876 108 aa4.47□□□□□ -1.69
UBP9YER098W RHO3Q00245 231 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms