RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W TCD1P38756 429 aa1.69□□□□□ -2.14
SSF2YDR312W YER188WP40103 239 aa1.69□□□□□ -2.14
SSF2YDR312W YMR144WP40214 342 aaKnown RBP1.69□□□□□ -2.14
SSF2YDR312W MRPL49P40858 161 aaPredicted RBP1.69□□□□□ -2.14
SSF2YDR312W MCM22P47167 239 aa1.69□□□□□ -2.14
SSF2YDR312W DID2P69771 204 aa1.69□□□□□ -2.14
SSF2YDR312W YMR166CQ03829 368 aa1.69□□□□□ -2.14
SSF2YDR312W PEX12Q04370 399 aa1.69□□□□□ -2.14
SSF2YDR312W YMR114CQ04471 368 aaKnown RBP1.69□□□□□ -2.14
SSF2YDR312W SEI1Q06058 285 aa1.69□□□□□ -2.14
SSF2YDR312W YOR268CQ08734 132 aa1.69□□□□□ -2.14
SSF2YDR312W GTT2Q12390 233 aa1.69□□□□□ -2.14
SSF2YDR312W SGA1P08019 549 aa1.68□□□□□ -2.14
SSF2YDR312W RPS5P26783 225 aaKnown RBP1.68□□□□□ -2.14
SSF2YDR312W EHD3P28817 500 aa1.68□□□□□ -2.14
SSF2YDR312W MEI4P29467 408 aa1.68□□□□□ -2.14
SSF2YDR312W MSN4P33749 630 aa1.68□□□□□ -2.14
SSF2YDR312W PRX1P34227 261 aaKnown RBP1.68□□□□□ -2.14
SSF2YDR312W LDB7P38210 180 aa1.68□□□□□ -2.14
SSF2YDR312W ICE2P40499 491 aa1.68□□□□□ -2.14
SSF2YDR312W YRB1P41920 201 aaKnown RBP1.68□□□□□ -2.14
SSF2YDR312W YGR026WP53217 278 aa1.68□□□□□ -2.14
SSF2YDR312W CDC36P06100 191 aaPredicted RBP1.67□□□□□ -2.14
SSF2YDR312W RAD10P06838 210 aa1.67□□□□□ -2.14
SSF2YDR312W ERD2P18414 219 aa1.67□□□□□ -2.14
SSF2YDR312W VMA6P32366 345 aaKnown RBP1.67□□□□□ -2.14
SSF2YDR312W RCN1P36054 211 aa1.67□□□□□ -2.14
SSF2YDR312W YBR096WP38256 230 aa1.67□□□□□ -2.14
SSF2YDR312W GRE3P38715 327 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
SSF2YDR312W ARC15P40518 154 aaRIP-Chip data1.67□□□□□ -2.14not detected
SSF2YDR312W OTU1P43558 301 aa1.67□□□□□ -2.14
SSF2YDR312W BLM10P43583 2143 aa1.67□□□□□ -2.14
SSF2YDR312W PIR5P46999 287 aa1.67□□□□□ -2.14
SSF2YDR312W MDM34P53083 459 aa1.67□□□□□ -2.14
SSF2YDR312W NSA1P53136 463 aaPredicted RBP1.67□□□□□ -2.14
SSF2YDR312W YNL247WP53852 767 aaKnown RBP1.67□□□□□ -2.14
SSF2YDR312W ABF2Q02486 183 aa1.67□□□□□ -2.14
SSF2YDR312W CGI121Q03705 181 aaKnown RBP1.67□□□□□ -2.14
SSF2YDR312W YOR283WQ12040 230 aaKnown RBP1.67□□□□□ -2.14
SSF2YDR312W LSO2Q3E772 92 aaKnown RBP1.67□□□□□ -2.14
SSF2YDR312W SAS5Q99314 248 aa1.67□□□□□ -2.14
SSF2YDR312W Q0144Q9ZZW2 109 aa1.67□□□□□ -2.14
SSF2YDR312W CYR1P08678 2026 aaKnown RBP1.66□□□□□ -2.14
SSF2YDR312W FAS1P07149 2051 aaKnown RBP1.66□□□□□ -2.14
SSF2YDR312W SEC22P22214 214 aa1.66□□□□□ -2.14
SSF2YDR312W STP22P25604 385 aa1.66□□□□□ -2.14
SSF2YDR312W TAH1P25638 111 aaPredicted RBP1.66□□□□□ -2.14
SSF2YDR312W ADE1P27616 306 aa1.66□□□□□ -2.14
SSF2YDR312W NTG1P31378 399 aa1.66□□□□□ -2.14
SSF2YDR312W YPT52P36018 234 aaKnown RBP1.66□□□□□ -2.14
SSF2YDR312W MNN5P46982 586 aa1.66□□□□□ -2.14
SSF2YDR312W YJR056CP47115 236 aa1.66□□□□□ -2.14
SSF2YDR312W RAD17P48581 401 aa1.66□□□□□ -2.14
SSF2YDR312W MIC26P50087 233 aa1.66□□□□□ -2.14
SSF2YDR312W GTR2P53290 341 aa1.66□□□□□ -2.14
SSF2YDR312W YNL046WP53956 172 aa1.66□□□□□ -2.14
SSF2YDR312W GRH1Q04410 372 aaKnown RBP1.66□□□□□ -2.14
SSF2YDR312W YPR172WQ06608 200 aa1.66□□□□□ -2.14
SSF2YDR312W YPL257WQ08974 193 aa1.66□□□□□ -2.14
SSF2YDR312W HTL1Q9URQ5 78 aa1.66□□□□□ -2.14
SSF2YDR312W FLO9P39712 1322 aa1.66□□□□□ -2.14
SSF2YDR312W CDC39P25655 2108 aaKnown RBP1.66□□□□□ -2.14
SSF2YDR312W RPL22AP05749 121 aaKnown RBP1.65□□□□□ -2.15
SSF2YDR312W YFR010W-AP0C5N0 62 aa1.65□□□□□ -2.15
SSF2YDR312W PPA2P28239 310 aa1.65□□□□□ -2.15
SSF2YDR312W PRS3P38689 320 aaKnown RBP1.65□□□□□ -2.15
SSF2YDR312W YHL037CP38733 133 aa1.65□□□□□ -2.15
SSF2YDR312W GON7P46984 123 aa1.65□□□□□ -2.15
SSF2YDR312W COS6P53344 381 aa1.65□□□□□ -2.15
SSF2YDR312W SSU72P53538 206 aaPredicted RBP1.65□□□□□ -2.15
SSF2YDR312W DAD3P69850 94 aa1.65□□□□□ -2.15
SSF2YDR312W PRM15Q03262 622 aa1.65□□□□□ -2.15
SSF2YDR312W MIX14Q04341 121 aa1.65□□□□□ -2.15
SSF2YDR312W YPR174CQ06616 221 aaPredicted RBP1.65□□□□□ -2.15
SSF2YDR312W EMC6Q12431 108 aa1.65□□□□□ -2.15
SSF2YDR312W YOR020W-AQ3E824 90 aa1.65□□□□□ -2.15
SSF2YDR312W Q0255P03881 472 aa1.64□□□□□ -2.15
SSF2YDR312W ERG24P32462 438 aaKnown RBP1.64□□□□□ -2.15
SSF2YDR312W SUI1P32911 108 aaKnown RBP1.64□□□□□ -2.15
SSF2YDR312W MAK5P38112 773 aaPredicted RBP1.64□□□□□ -2.15
SSF2YDR312W FYV6P53913 173 aa1.64□□□□□ -2.15
SSF2YDR312W RGM1Q00453 211 aa1.64□□□□□ -2.15
SSF2YDR312W SSQ1Q05931 657 aaPredicted RBP1.64□□□□□ -2.15
SSF2YDR312W YPR011CQ12251 326 aa1.64□□□□□ -2.15
SSF2YDR312W UBR1P19812 1950 aa1.64□□□□□ -2.15
SSF2YDR312W PUT1P09368 476 aa1.63□□□□□ -2.15
SSF2YDR312W NHP6BP11633 99 aaKnown RBP1.63□□□□□ -2.15
SSF2YDR312W RPB4P20433 221 aaPredicted RBP1.63□□□□□ -2.15
SSF2YDR312W SCO1P23833 295 aa1.63□□□□□ -2.15
SSF2YDR312W YCR099CP25657 155 aa1.63□□□□□ -2.15
SSF2YDR312W YKT6P36015 200 aaKnown RBP1.63□□□□□ -2.15
SSF2YDR312W DOG1P38774 246 aa1.63□□□□□ -2.15
SSF2YDR312W RPF1P38805 295 aaKnown RBP1.63□□□□□ -2.15
SSF2YDR312W MSS2P40990 351 aa1.63□□□□□ -2.15
SSF2YDR312W YFL051CP43552 160 aa1.63□□□□□ -2.15
SSF2YDR312W YJR149WP47177 404 aa1.63□□□□□ -2.15
SSF2YDR312W YGL159WP53110 370 aa1.63□□□□□ -2.15
SSF2YDR312W YGL034CP53186 121 aa1.63□□□□□ -2.15
SSF2YDR312W TIM11P81449 96 aaPredicted RBP1.63□□□□□ -2.15
SSF2YDR312W GAS3Q03655 524 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms