RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BFR2	YDR299W	MPA43	P53583	542 aa	Predicted RBP	0.48	□□□□□ -2.33
BFR2	YDR299W	PDR17	P53844	350 aa		0.48	□□□□□ -2.33
BFR2	YDR299W	PGA2	P53903	129 aa		0.48	□□□□□ -2.33
BFR2	YDR299W	LSM7	P53905	115 aa	Known RBP	0.48	□□□□□ -2.33
BFR2	YDR299W	COG5	P53951	403 aa		0.48	□□□□□ -2.33
BFR2	YDR299W	UBC7	Q02159	165 aa		0.48	□□□□□ -2.33
BFR2	YDR299W	CWC27	Q02770	301 aa		0.48	□□□□□ -2.33
BFR2	YDR299W	MRPS17	Q03246	237 aa	Predicted RBP	0.48	□□□□□ -2.33
BFR2	YDR299W	GAS3	Q03655	524 aa		0.48	□□□□□ -2.33
BFR2	YDR299W	YDR249C	Q03787	373 aa		0.48	□□□□□ -2.33
BFR2	YDR299W	BNA7	Q04066	261 aa		0.48	□□□□□ -2.33
BFR2	YDR299W	MCP1	Q12106	302 aa		0.48	□□□□□ -2.33
BFR2	YDR299W	TDA8	Q6B2U8	126 aa		0.48	□□□□□ -2.33
BFR2	YDR299W	ODC2	Q99297	307 aa		0.48	□□□□□ -2.33
BFR2	YDR299W	YPL229W	Q99395	206 aa		0.48	□□□□□ -2.33
BFR2	YDR299W	YLR236C	A0A023PZG4	107 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	YHR139C-A	O13536	103 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	QCR8	P08525	94 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	RPS24A	P0CX31	135 aa	Known RBP	0.47	□□□□□ -2.33
BFR2	YDR299W	RPS24B	P0CX32	135 aa	Known RBP	0.47	□□□□□ -2.33
BFR2	YDR299W	MATALPHA1	P0CY06	175 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	HMLALPHA1	P0CY07	175 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	SEC11	P15367	167 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	RPB4	P20433	221 aa	Predicted RBP	0.47	□□□□□ -2.33
BFR2	YDR299W	NTG1	P31378	399 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	PRP18	P33411	251 aa	Predicted RBP	0.47	□□□□□ -2.33
BFR2	YDR299W	SRY1	P36007	326 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	MIC12	P38341	106 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	YHL042W	P38729	150 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	YER134C	P40081	178 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	SOK1	P40317	901 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	FLX1	P40464	311 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	YRB2	P40517	327 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	MSS2	P40990	351 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	ADO1	P47143	340 aa	Known RBP	0.47	□□□□□ -2.33
BFR2	YDR299W	KNH1	P50112	268 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	MGA1	P53050	456 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	ARO8	P53090	500 aa	Known RBP	0.47	□□□□□ -2.33
BFR2	YDR299W	YGR050C	P53231	118 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	HNT1	Q04344	158 aa	Known RBP	0.47	□□□□□ -2.33
BFR2	YDR299W	YPR174C	Q06616	221 aa	Predicted RBP	0.47	□□□□□ -2.33
BFR2	YDR299W	YLR031W	Q07978	186 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	YLR036C	Q07986	203 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	YNL146C-A	Q3E7Z1	64 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	YIL177C	P40434	1758 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	YJL225C	P40889	1758 aa		0.47	□□□□□ -2.33
BFR2	YDR299W	YCR087C-A	P37263	153 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	IKI1	P38874	309 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	ERG28	P40030	148 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	GLE2	P40066	365 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	SKI6	P46948	246 aa	Predicted RBP	0.46	□□□□□ -2.34
BFR2	YDR299W	RAD17	P48581	401 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	CGR1	P53188	120 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	NOP19	P53317	196 aa	Predicted RBP	0.46	□□□□□ -2.34
BFR2	YDR299W	RTC4	P53850	401 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	CWC21	Q03375	135 aa	Known RBP	0.46	□□□□□ -2.34
BFR2	YDR299W	SPG3	Q04398	127 aa	Predicted RBP	0.46	□□□□□ -2.34
BFR2	YDR299W	YKL183C-A	Q3E765	70 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	PDR18	P53756	1333 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	MDM35	O60200	86 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	SNF4	P12904	322 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	CNB1	P25296	175 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	OCH1	P31755	480 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	ASF2	P32448	525 aa	Predicted RBP	0.46	□□□□□ -2.34
BFR2	YDR299W	PAN3	P36102	679 aa	Predicted RBP	0.46	□□□□□ -2.34
BFR2	YDR299W	UTP30	P36144	274 aa	Known RBP	0.46	□□□□□ -2.34
BFR2	YDR299W	RTC3	P38804	111 aa	Predicted RBP	0.46	□□□□□ -2.34
BFR2	YDR299W	EAF6	P47128	113 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	ALG13	P53178	202 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	GET1	P53192	235 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	YNR077C	P53758	84 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	DAD4	P69851	72 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	YMR295C	Q03559	197 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	YMR315W	Q04869	349 aa	Known RBP	0.46	□□□□□ -2.34
BFR2	YDR299W	YNG1	Q08465	219 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	RAD28	Q12021	506 aa		0.46	□□□□□ -2.34
BFR2	YDR299W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.46	□□□□□ -2.34
BFR2	YDR299W	MSB2	P32334	1306 aa		0.45	□□□□□ -2.34
BFR2	YDR299W	CDC33	P07260	213 aa	Known RBP	0.45	□□□□□ -2.34
BFR2	YDR299W	RPL27A	P0C2H6	136 aa	Known RBP	0.45	□□□□□ -2.34
BFR2	YDR299W	MER1	P16523	270 aa		0.45	□□□□□ -2.34
BFR2	YDR299W	ATP15	P21306	62 aa		0.45	□□□□□ -2.34
BFR2	YDR299W	SFK1	P35735	353 aa		0.45	□□□□□ -2.34
BFR2	YDR299W	MTW1	P39731	289 aa		0.45	□□□□□ -2.34
BFR2	YDR299W	HPA3	P39979	161 aa		0.45	□□□□□ -2.34
BFR2	YDR299W	ARP3	P47117	449 aa	Known RBP	0.45	□□□□□ -2.34
BFR2	YDR299W	CWC23	P52868	283 aa	Predicted RBP	0.45	□□□□□ -2.34
BFR2	YDR299W	YNL247W	P53852	767 aa	Known RBP	0.45	□□□□□ -2.34
BFR2	YDR299W	YDR274C	P87283	123 aa		0.45	□□□□□ -2.34
BFR2	YDR299W	SHH3	Q04487	196 aa		0.45	□□□□□ -2.34
BFR2	YDR299W	ABP140	Q08641	628 aa	Known RBP	0.45	□□□□□ -2.34
BFR2	YDR299W	DGA1	Q08650	418 aa		0.45	□□□□□ -2.34
BFR2	YDR299W	YAR023C	D6VPM8	179 aa		0.44	□□□□□ -2.34
BFR2	YDR299W	MBF1	O14467	151 aa	Known RBP	0.44	□□□□□ -2.34
BFR2	YDR299W	HTB1	P02293	131 aa	Known RBP	0.44	□□□□□ -2.34
BFR2	YDR299W	HTB2	P02294	131 aa		0.44	□□□□□ -2.34
BFR2	YDR299W	PHO85	P17157	305 aa		0.44	□□□□□ -2.34
BFR2	YDR299W	SPO13	P23624	291 aa		0.44	□□□□□ -2.34
BFR2	YDR299W	CBT1	P36038	271 aa	Predicted RBP	0.44	□□□□□ -2.34
BFR2	YDR299W	YNL194C	P40169	301 aa		0.44	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 84.9 ms