RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C ERG10P41338 398 aaKnown RBP1.06□□□□□ -2.24
UFD2YDL190C IRC18P47056 224 aa1.06□□□□□ -2.24
UFD2YDL190C BXI1P48558 297 aa1.06□□□□□ -2.24
UFD2YDL190C SYF2P53277 215 aaPredicted RBP1.06□□□□□ -2.24
UFD2YDL190C ERV29P53337 310 aa1.06□□□□□ -2.24
UFD2YDL190C INM2Q05533 292 aa1.06□□□□□ -2.24
UFD2YDL190C YLR030WQ07967 263 aa1.06□□□□□ -2.24
UFD2YDL190C IES4Q08561 116 aa1.06□□□□□ -2.24
UFD2YDL190C HIS3P06633 220 aa1.05□□□□□ -2.24
UFD2YDL190C MET2P08465 486 aa1.05□□□□□ -2.24
UFD2YDL190C KDX1P36005 433 aa1.05□□□□□ -2.24
UFD2YDL190C BUD13P46947 266 aaPredicted RBP1.05□□□□□ -2.24
UFD2YDL190C PDR17P53844 350 aa1.05□□□□□ -2.24
UFD2YDL190C YDR248CQ03786 193 aa1.05□□□□□ -2.24
UFD2YDL190C BBP1Q12365 385 aa1.05□□□□□ -2.24
UFD2YDL190C HTL1Q9URQ5 78 aa1.05□□□□□ -2.24
UFD2YDL190C SGA1P08019 549 aa1.05□□□□□ -2.24
UFD2YDL190C AGA2P32781 87 aa1.05□□□□□ -2.24
UFD2YDL190C YCR087C-AP37263 153 aa1.05□□□□□ -2.24
UFD2YDL190C GRE3P38715 327 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
UFD2YDL190C SRP14P38985 146 aa1.05□□□□□ -2.24
UFD2YDL190C POG1P40473 351 aa1.05□□□□□ -2.24
UFD2YDL190C MMS2P53152 137 aa1.05□□□□□ -2.24
UFD2YDL190C YML096WQ04489 525 aa1.05□□□□□ -2.24
UFD2YDL190C YDR114CQ04597 100 aa1.05□□□□□ -2.24
UFD2YDL190C YET3Q07451 203 aa1.05□□□□□ -2.24
UFD2YDL190C YPL257WQ08974 193 aa1.05□□□□□ -2.24
UFD2YDL190C YDL012CQ12489 107 aa1.05□□□□□ -2.24
UFD2YDL190C QCR2P07257 368 aa1.04□□□□□ -2.24
UFD2YDL190C GCN3P14741 305 aa1.04□□□□□ -2.24
UFD2YDL190C UBC6P33296 250 aaPredicted RBP1.04□□□□□ -2.24
UFD2YDL190C APS1P35181 156 aa1.04□□□□□ -2.24
UFD2YDL190C CAF4P36130 643 aa1.04□□□□□ -2.24
UFD2YDL190C YGP1P38616 354 aaKnown RBP1.04□□□□□ -2.24
UFD2YDL190C COS8P38723 381 aa1.04□□□□□ -2.24
UFD2YDL190C FAR7P43592 221 aa1.04□□□□□ -2.24
UFD2YDL190C GON7P46984 123 aa1.04□□□□□ -2.24
UFD2YDL190C YJR141WP47172 347 aaPredicted RBP1.04□□□□□ -2.24
UFD2YDL190C GTR2P53290 341 aa1.04□□□□□ -2.24
UFD2YDL190C YIP3P53633 176 aa1.04□□□□□ -2.24
UFD2YDL190C RTC4P53850 401 aa1.04□□□□□ -2.24
UFD2YDL190C APJ1P53940 528 aa1.04□□□□□ -2.24
UFD2YDL190C NIP7Q08962 181 aaKnown RBP1.04□□□□□ -2.24
UFD2YDL190C AGC1Q12482 902 aa1.04□□□□□ -2.24
UFD2YDL190C LSO2Q3E772 92 aaKnown RBP1.04□□□□□ -2.24
UFD2YDL190C ACC1Q00955 2233 aaKnown RBP1.04□□□□□ -2.24
UFD2YDL190C MDN1Q12019 4910 aaKnown RBP1.04□□□□□ -2.24
UFD2YDL190C PUT1P09368 476 aa1.04□□□□□ -2.24
UFD2YDL190C DSF1P0CX08 502 aa1.04□□□□□ -2.24
UFD2YDL190C YNR073CP0CX09 502 aa1.04□□□□□ -2.24
UFD2YDL190C TRR1P29509 319 aaKnown RBP1.04□□□□□ -2.24
UFD2YDL190C ACP1P32463 125 aa1.04□□□□□ -2.24
UFD2YDL190C FMT1P32785 401 aa1.04□□□□□ -2.24
UFD2YDL190C YPT52P36018 234 aaKnown RBP1.04□□□□□ -2.24
UFD2YDL190C FES1P38260 290 aa1.04□□□□□ -2.24
UFD2YDL190C SHG1P38337 142 aa1.04□□□□□ -2.24
UFD2YDL190C RPF1P38805 295 aaKnown RBP1.04□□□□□ -2.24
UFD2YDL190C TMA22P47089 198 aaPredicted RBP1.04□□□□□ -2.24
UFD2YDL190C YPR195CQ06594 109 aa1.04□□□□□ -2.24
UFD2YDL190C YOR268CQ08734 132 aa1.04□□□□□ -2.24
UFD2YDL190C YOR020W-AQ3E824 90 aa1.04□□□□□ -2.24
UFD2YDL190C GCY1P14065 312 aaKnown RBP RIP-Chip data1.03□□□□□ -2.24not detected
UFD2YDL190C FCY2P17064 533 aa1.03□□□□□ -2.24
UFD2YDL190C MAK5P38112 773 aaPredicted RBP1.03□□□□□ -2.24
UFD2YDL190C AME1P38313 324 aa1.03□□□□□ -2.24
UFD2YDL190C YAR068WP39564 161 aa1.03□□□□□ -2.24
UFD2YDL190C FIS1P40515 155 aa1.03□□□□□ -2.24
UFD2YDL190C OST2P46964 130 aa1.03□□□□□ -2.24
UFD2YDL190C PIR5P46999 287 aa1.03□□□□□ -2.24
UFD2YDL190C YJL016WP47072 561 aa1.03□□□□□ -2.24
UFD2YDL190C PRM8P53174 237 aa1.03□□□□□ -2.24
UFD2YDL190C ABF2Q02486 183 aa1.03□□□□□ -2.24
UFD2YDL190C YMR279CQ03263 540 aa1.03□□□□□ -2.24
UFD2YDL190C YMD8Q03697 442 aa1.03□□□□□ -2.24
UFD2YDL190C YML108WQ03759 105 aa1.03□□□□□ -2.24
UFD2YDL190C GRH1Q04410 372 aaKnown RBP1.03□□□□□ -2.24
UFD2YDL190C YBR063CP38083 404 aa1.03□□□□□ -2.24
UFD2YDL190C FIG1P38224 298 aa1.03□□□□□ -2.24
UFD2YDL190C DOG2P38773 246 aa1.03□□□□□ -2.24
UFD2YDL190C DOG1P38774 246 aa1.03□□□□□ -2.24
UFD2YDL190C YER084WP40057 128 aa1.03□□□□□ -2.24
UFD2YDL190C YER121WP40076 114 aa1.03□□□□□ -2.24
UFD2YDL190C YKE4P40544 346 aa1.03□□□□□ -2.24
UFD2YDL190C RPA43P46669 326 aa1.03□□□□□ -2.24
UFD2YDL190C YLR460CP54007 376 aa1.03□□□□□ -2.24
UFD2YDL190C SNO1Q03144 224 aa1.03□□□□□ -2.24
UFD2YDL190C PEX12Q04370 399 aa1.03□□□□□ -2.24
UFD2YDL190C ARR2Q06597 130 aa1.03□□□□□ -2.24
UFD2YDL190C BRX1Q08235 291 aaKnown RBP1.03□□□□□ -2.24
UFD2YDL190C YNG1Q08465 219 aa1.03□□□□□ -2.24
UFD2YDL190C FEX1Q08913 375 aa1.03□□□□□ -2.24
UFD2YDL190C FEX2Q08991 375 aa1.03□□□□□ -2.24
UFD2YDL190C ADH3P07246 375 aaKnown RBP1.02□□□□□ -2.25
UFD2YDL190C SEC4P07560 215 aaKnown RBP1.02□□□□□ -2.25
UFD2YDL190C YPR170W-BP0C5R9 85 aa1.02□□□□□ -2.25
UFD2YDL190C KRE1P17260 313 aa1.02□□□□□ -2.25
UFD2YDL190C MEI4P29467 408 aa1.02□□□□□ -2.25
UFD2YDL190C MRPL28P36527 147 aa1.02□□□□□ -2.25
UFD2YDL190C YHR125WP38831 101 aa1.02□□□□□ -2.25
UFD2YDL190C ARC15P40518 154 aaRIP-Chip data1.02□□□□□ -2.25not detected
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms