RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W COQ10Q08058 207 aa1.14□□□□□ -2.23
MSH5YDL154W SMT3Q12306 101 aaKnown RBP1.14□□□□□ -2.23
MSH5YDL154W RPS28AQ3E7X9 67 aaPredicted RBP1.14□□□□□ -2.23
MSH5YDL154W YBL112CQ3E7Y4 105 aa1.14□□□□□ -2.23
MSH5YDL154W NCB2Q92317 146 aa1.14□□□□□ -2.23
MSH5YDL154W MYO1P08964 1928 aa1.14□□□□□ -2.23
MSH5YDL154W YLR422WQ06409 1932 aa1.14□□□□□ -2.23
MSH5YDL154W HIS3P06633 220 aa1.14□□□□□ -2.23
MSH5YDL154W ADH3P07246 375 aaKnown RBP1.14□□□□□ -2.23
MSH5YDL154W RME1P32338 300 aaKnown RBP1.14□□□□□ -2.23
MSH5YDL154W PRX1P34227 261 aaKnown RBP1.14□□□□□ -2.23
MSH5YDL154W SRP14P38985 146 aa1.14□□□□□ -2.23
MSH5YDL154W FMP32P43557 207 aa1.14□□□□□ -2.23
MSH5YDL154W OST3P48439 350 aa1.14□□□□□ -2.23
MSH5YDL154W TIM11P81449 96 aaPredicted RBP1.14□□□□□ -2.23
MSH5YDL154W MIX17Q03667 156 aa1.14□□□□□ -2.23
MSH5YDL154W RDS3Q06835 107 aaPredicted RBP1.14□□□□□ -2.23
MSH5YDL154W FEX1Q08913 375 aa1.14□□□□□ -2.23
MSH5YDL154W FEX2Q08991 375 aa1.14□□□□□ -2.23
MSH5YDL154W DAS2Q12084 232 aa1.14□□□□□ -2.23
MSH5YDL154W RTR2Q12378 196 aa1.14□□□□□ -2.23
MSH5YDL154W GEP5Q12393 293 aa1.14□□□□□ -2.23
MSH5YDL154W RHO1P06780 209 aaKnown RBP1.13□□□□□ -2.23
MSH5YDL154W COQ1P18900 473 aa1.13□□□□□ -2.23
MSH5YDL154W SEC22P22214 214 aa1.13□□□□□ -2.23
MSH5YDL154W BUD23P25627 275 aaPredicted RBP1.13□□□□□ -2.23
MSH5YDL154W YBR096WP38256 230 aa1.13□□□□□ -2.23
MSH5YDL154W YAR068WP39564 161 aa1.13□□□□□ -2.23
MSH5YDL154W YER189WP40104 122 aa1.13□□□□□ -2.23
MSH5YDL154W APS3P47064 194 aa1.13□□□□□ -2.23
MSH5YDL154W DSK2P48510 373 aa1.13□□□□□ -2.23
MSH5YDL154W TIM13P53299 105 aa1.13□□□□□ -2.23
MSH5YDL154W YLR283WQ05867 314 aa1.13□□□□□ -2.23
MSH5YDL154W YPD1Q07688 167 aa1.13□□□□□ -2.23
MSH5YDL154W ADF1Q2V2Q1 113 aa1.13□□□□□ -2.23
MSH5YDL154W SLO1Q3E784 85 aa1.13□□□□□ -2.23
MSH5YDL154W THP2O13539 261 aaKnown RBP1.13□□□□□ -2.23
MSH5YDL154W QCR7P00128 127 aa1.13□□□□□ -2.23
MSH5YDL154W ERG24P32462 438 aaKnown RBP1.13□□□□□ -2.23
MSH5YDL154W YBL010CP32788 280 aa1.13□□□□□ -2.23
MSH5YDL154W UBC6P33296 250 aaPredicted RBP1.13□□□□□ -2.23
MSH5YDL154W VPS21P36017 210 aaKnown RBP1.13□□□□□ -2.23
MSH5YDL154W YJL144WP47009 104 aa1.13□□□□□ -2.23
MSH5YDL154W LSM1P47017 172 aaKnown RBP1.13□□□□□ -2.23
MSH5YDL154W MDM34P53083 459 aa1.13□□□□□ -2.23
MSH5YDL154W YGL159WP53110 370 aa1.13□□□□□ -2.23
MSH5YDL154W GRH1Q04410 372 aaKnown RBP1.13□□□□□ -2.23
MSH5YDL154W SML1Q04964 104 aa1.13□□□□□ -2.23
MSH5YDL154W YPL257WQ08974 193 aa1.13□□□□□ -2.23
MSH5YDL154W YLR053CQ12026 108 aa1.13□□□□□ -2.23
MSH5YDL154W YPL247CQ12523 523 aa1.13□□□□□ -2.23
MSH5YDL154W YIR021W-AQ3E739 70 aa1.13□□□□□ -2.23
MSH5YDL154W CDC36P06100 191 aaPredicted RBP1.12□□□□□ -2.23
MSH5YDL154W COS2P0CX12 379 aa1.12□□□□□ -2.23
MSH5YDL154W COS3P0CX13 379 aa1.12□□□□□ -2.23
MSH5YDL154W CBF1P17106 351 aa1.12□□□□□ -2.23
MSH5YDL154W STE18P18852 110 aa1.12□□□□□ -2.23
MSH5YDL154W PPH21P23594 369 aa1.12□□□□□ -2.23
MSH5YDL154W ECM13P38195 257 aa1.12□□□□□ -2.23
MSH5YDL154W COS8P38723 381 aa1.12□□□□□ -2.23
MSH5YDL154W TIF34P40217 347 aaKnown RBP1.12□□□□□ -2.23
MSH5YDL154W RFC4P40339 323 aaKnown RBP1.12□□□□□ -2.23
MSH5YDL154W TRM9P49957 279 aa1.12□□□□□ -2.23
MSH5YDL154W YMD8Q03697 442 aa1.12□□□□□ -2.23
MSH5YDL154W SDH7Q04401 133 aa1.12□□□□□ -2.23
MSH5YDL154W YMR114CQ04471 368 aaKnown RBP1.12□□□□□ -2.23
MSH5YDL154W DCR2Q05924 578 aa1.12□□□□□ -2.23
MSH5YDL154W GIS3Q12418 502 aa1.12□□□□□ -2.23
MSH5YDL154W SAS5Q99314 248 aa1.12□□□□□ -2.23
MSH5YDL154W HTL1Q9URQ5 78 aa1.12□□□□□ -2.23
MSH5YDL154W JIP3O13555 125 aa1.12□□□□□ -2.23
MSH5YDL154W COX5AP00424 153 aa1.12□□□□□ -2.23
MSH5YDL154W CDC28P00546 298 aaKnown RBP1.12□□□□□ -2.23
MSH5YDL154W HAP2P06774 265 aa1.12□□□□□ -2.23
MSH5YDL154W YBR121C-AP0C5L4 52 aa1.12□□□□□ -2.23
MSH5YDL154W SNF6P18888 332 aa1.12□□□□□ -2.23
MSH5YDL154W YMR31P19955 123 aa1.12□□□□□ -2.23
MSH5YDL154W DBF2P22204 572 aa1.12□□□□□ -2.23
MSH5YDL154W YCR102CP25608 368 aa1.12□□□□□ -2.23
MSH5YDL154W TFC1P32367 649 aa1.12□□□□□ -2.23
MSH5YDL154W MGM101P32787 269 aaKnown RBP1.12□□□□□ -2.23
MSH5YDL154W RIB1P38066 345 aa1.12□□□□□ -2.23
MSH5YDL154W RGI1P40043 161 aaPredicted RBP1.12□□□□□ -2.23
MSH5YDL154W RSM25P40496 264 aa1.12□□□□□ -2.23
MSH5YDL154W PRM10P42946 383 aa1.12□□□□□ -2.23
MSH5YDL154W OTU1P43558 301 aa1.12□□□□□ -2.23
MSH5YDL154W OST2P46964 130 aa1.12□□□□□ -2.23
MSH5YDL154W PIR5P46999 287 aa1.12□□□□□ -2.23
MSH5YDL154W LSM8P47093 109 aaKnown RBP1.12□□□□□ -2.23
MSH5YDL154W RMR1P53060 241 aa1.12□□□□□ -2.23
MSH5YDL154W MPC1P53157 130 aaKnown RBP1.12□□□□□ -2.23
MSH5YDL154W HHO1P53551 258 aa1.12□□□□□ -2.23
MSH5YDL154W MRPS17Q03246 237 aaPredicted RBP1.12□□□□□ -2.23
MSH5YDL154W FCF1Q05498 189 aaPredicted RBP1.12□□□□□ -2.23
MSH5YDL154W SEI1Q06058 285 aa1.12□□□□□ -2.23
MSH5YDL154W YPR127WQ06494 345 aa1.12□□□□□ -2.23
MSH5YDL154W SUE1Q06524 206 aa1.12□□□□□ -2.23
MSH5YDL154W YOR186WQ08560 144 aa1.12□□□□□ -2.23
MSH5YDL154W GPM2Q12008 311 aa1.12□□□□□ -2.23
MSH5YDL154W GET4Q12125 312 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms