RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROT2	YBR229C	TNA1	P53322	534 aa		4.23	□□□□□ -1.73
ROT2	YBR229C	THI72	Q08579	599 aa		4.23	□□□□□ -1.73
ROT2	YBR229C	RPL25	P04456	142 aa	Known RBP	4.22	□□□□□ -1.73
ROT2	YBR229C	PAU19	P0CE85	124 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	PAU21	P0CE86	164 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	PAU22	P0CE87	164 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	PAU1	P0CE88	120 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	PAU14	P0CE89	120 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	PAU6	P0CE90	120 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	PAU18	P0CE91	120 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	PAU8	P0CE92	120 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	PAU11	P0CE93	120 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	PAU3	P25610	124 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	PAU13	P38725	120 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	LSM4	P40070	187 aa	Known RBP	4.22	□□□□□ -1.73
ROT2	YBR229C	ERV14	P53173	138 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	ALG12	P53730	551 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	PAU10	Q03050	120 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	TSA2	Q04120	196 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	COQ11	Q05892	277 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	PAU20	Q08322	120 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	ALG6	Q12001	544 aa	Known RBP	4.22	□□□□□ -1.73
ROT2	YBR229C	AKR2	Q12013	749 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	PAU9	Q3E770	120 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	SAG1	P20840	650 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	HSP10	P38910	106 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	YIL029C	P40538	142 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	PDR17	P53844	350 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	YDR391C	Q04170	232 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	CUE4	Q04201	117 aa	Predicted RBP	4.22	□□□□□ -1.73
ROT2	YBR229C	YMR254C	Q04838	102 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	YOR292C	Q08743	309 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	SME1	Q12330	94 aa	Predicted RBP	4.22	□□□□□ -1.73
ROT2	YBR229C	YOP1	Q12402	180 aa		4.22	□□□□□ -1.73
ROT2	YBR229C	RPL17A	P05740	184 aa	Known RBP	4.21	□□□□□ -1.73
ROT2	YBR229C	ALK2	P32789	676 aa	Predicted RBP	4.21	□□□□□ -1.73
ROT2	YBR229C	NTC20	P38302	140 aa	Predicted RBP	4.21	□□□□□ -1.73
ROT2	YBR229C	RPL17B	P46990	184 aa	Known RBP	4.21	□□□□□ -1.73
ROT2	YBR229C	MRPL19	P53875	158 aa		4.21	□□□□□ -1.73
ROT2	YBR229C	OCA2	P53949	197 aa		4.21	□□□□□ -1.73
ROT2	YBR229C	MIX14	Q04341	121 aa		4.21	□□□□□ -1.73
ROT2	YBR229C	PRP11	Q07350	266 aa	Predicted RBP	4.21	□□□□□ -1.73
ROT2	YBR229C	MPD1	Q12404	318 aa	Known RBP	4.21	□□□□□ -1.73
ROT2	YBR229C	RAX2	Q12465	1220 aa		4.21	□□□□□ -1.73
ROT2	YBR229C	ELO2	P25358	347 aa		4.21	□□□□□ -1.74
ROT2	YBR229C	SHB17	P36136	271 aa	Known RBP	4.21	□□□□□ -1.74
ROT2	YBR229C	MRPL28	P36527	147 aa		4.21	□□□□□ -1.74
ROT2	YBR229C	PAU5	P43575	122 aa		4.21	□□□□□ -1.74
ROT2	YBR229C	YBR255C-A	Q3E776	120 aa		4.21	□□□□□ -1.74
ROT2	YBR229C	BEM2	P39960	2167 aa	Known RBP	4.21	□□□□□ -1.74
ROT2	YBR229C	YPT1	P01123	206 aa	Known RBP	4.2	□□□□□ -1.74
ROT2	YBR229C	NHP6A	P11632	93 aa	Known RBP	4.2	□□□□□ -1.74
ROT2	YBR229C	DAL3	P32459	195 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	MGE1	P38523	228 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	COX15	P40086	486 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	PRY1	P47032	299 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	NRM1	P53718	249 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	CYT2	Q00873	224 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	DPB4	Q04603	196 aa	Known RBP	4.2	□□□□□ -1.74
ROT2	YBR229C	ERV2	Q12284	196 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	ATG5	Q12380	294 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	ATG40	Q99325	256 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	GLT1	Q12680	2145 aa	Known RBP	4.2	□□□□□ -1.74
ROT2	YBR229C	QCR9	P22289	66 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	SPO13	P23624	291 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	CDC50	P25656	391 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	MCH2	P36032	473 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	YER079W	P40052	210 aa	Known RBP	4.2	□□□□□ -1.74
ROT2	YBR229C	YIL169C	P40442	995 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	RIB4	P50861	169 aa	Predicted RBP	4.2	□□□□□ -1.74
ROT2	YBR229C	YAP1802	P53309	568 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	MRP51	Q02950	344 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	PIN3	Q06449	215 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	COA6	Q3E846	104 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	BRR2	P32639	2163 aa	Known RBP	4.2	□□□□□ -1.74
ROT2	YBR229C	PRE9	P23638	258 aa	Known RBP	4.2	□□□□□ -1.74
ROT2	YBR229C	YGR269W	P40326	108 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	RTS2	P40962	232 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	OST1	P41543	476 aa	Known RBP	4.2	□□□□□ -1.74
ROT2	YBR229C	ECO1	P43605	281 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	ATG27	P46989	271 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	TTI2	P47168	421 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	UPS1	Q05776	175 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	YPR098C	Q06089	161 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	HRD1	Q08109	551 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	YOL118C	Q08259	102 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	YOR192C-C	Q3E736	78 aa		4.2	□□□□□ -1.74
ROT2	YBR229C	BGL2	P15703	313 aa	Known RBP	4.19	□□□□□ -1.74
ROT2	YBR229C	IMP1	P28627	190 aa		4.19	□□□□□ -1.74
ROT2	YBR229C	ACP1	P32463	125 aa		4.19	□□□□□ -1.74
ROT2	YBR229C	SCM4	P32564	187 aa		4.19	□□□□□ -1.74
ROT2	YBR229C	UBS1	P38290	277 aa		4.19	□□□□□ -1.74
ROT2	YBR229C	YVH1	Q02256	364 aa	Known RBP	4.19	□□□□□ -1.74
ROT2	YBR229C	YAP6	Q03935	383 aa		4.19	□□□□□ -1.74
ROT2	YBR229C	DCN1	Q12395	269 aa		4.19	□□□□□ -1.74
ROT2	YBR229C	PTC7	P38797	343 aa		4.19	□□□□□ -1.74
ROT2	YBR229C	NOP16	P40007	231 aa	Known RBP	4.19	□□□□□ -1.74
ROT2	YBR229C	YGR050C	P53231	118 aa		4.19	□□□□□ -1.74
ROT2	YBR229C	ACS1	Q01574	713 aa		4.19	□□□□□ -1.74
ROT2	YBR229C	NCE102	Q12207	173 aa	RIP-Chip data	4.19	□□□□□ -1.74	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms