RNA–Protein interactions for RNA: YBR065C

ECM2, Transcript of Pre-mRNA splicing factor, yeast

Gene ECM2, Length 1,095 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM2	YBR065C	YRF1-5	P0CX21	1796 aa		4.1	□□□□□ -1.75
ECM2	YBR065C	YRF1-8	P0CX22	1796 aa		4.1	□□□□□ -1.75
ECM2	YBR065C	FKS1	P38631	1876 aa	Known RBP	4.1	□□□□□ -1.75
ECM2	YBR065C	YLR156W	P0CE96	114 aa		4.1	□□□□□ -1.75
ECM2	YBR065C	YLR159W	P0CE97	114 aa		4.1	□□□□□ -1.75
ECM2	YBR065C	YLR161W	P0CE98	114 aa		4.1	□□□□□ -1.75
ECM2	YBR065C	GRX2	P17695	143 aa	Known RBP	4.1	□□□□□ -1.75
ECM2	YBR065C	SRP102	P36057	244 aa	Predicted RBP	4.1	□□□□□ -1.75
ECM2	YBR065C	UTP30	P36144	274 aa	Known RBP	4.1	□□□□□ -1.75
ECM2	YBR065C	ARC15	P40518	154 aa	RIP-Chip data	4.1	□□□□□ -1.75	not detected
ECM2	YBR065C	YNL010W	P53981	241 aa	Known RBP	4.1	□□□□□ -1.75
ECM2	YBR065C	NUP49	Q02199	472 aa		4.1	□□□□□ -1.75
ECM2	YBR065C	SOD1	P00445	154 aa	Known RBP	4.09	□□□□□ -1.75
ECM2	YBR065C	HIS3	P06633	220 aa		4.09	□□□□□ -1.75
ECM2	YBR065C	CMD1	P06787	147 aa	Known RBP	4.09	□□□□□ -1.75
ECM2	YBR065C	AHC2	P25649	128 aa		4.09	□□□□□ -1.75
ECM2	YBR065C	YIL059C	P40520	121 aa		4.09	□□□□□ -1.75
ECM2	YBR065C	YIR035C	P40579	254 aa		4.09	□□□□□ -1.75
ECM2	YBR065C	FMP32	P43557	207 aa		4.09	□□□□□ -1.75
ECM2	YBR065C	ARO8	P53090	500 aa	Known RBP	4.09	□□□□□ -1.75
ECM2	YBR065C	RSM10	Q03201	203 aa		4.09	□□□□□ -1.75
ECM2	YBR065C	MAK3	Q03503	176 aa		4.09	□□□□□ -1.75
ECM2	YBR065C	PLP1	Q04004	230 aa		4.09	□□□□□ -1.75
ECM2	YBR065C	SHH4	Q06236	168 aa		4.09	□□□□□ -1.75
ECM2	YBR065C	YLR053C	Q12026	108 aa		4.09	□□□□□ -1.75
ECM2	YBR065C	RIO1	Q12196	484 aa	Known RBP	4.09	□□□□□ -1.75
ECM2	YBR065C	DGA1	Q08650	418 aa		4.08	□□□□□ -1.76
ECM2	YBR065C	SAS5	Q99314	248 aa		4.08	□□□□□ -1.76
ECM2	YBR065C	TY1B-BR	Q12193	1756 aa		4.07	□□□□□ -1.76
ECM2	YBR065C	TY1B-GR3	Q12316	1755 aa		4.07	□□□□□ -1.76
ECM2	YBR065C	TY1B-OR	Q92393	1755 aa		4.07	□□□□□ -1.76
ECM2	YBR065C	YHR032W-A	P0C5N6	59 aa		4.07	□□□□□ -1.76
ECM2	YBR065C	CKS1	P20486	150 aa	Known RBP	4.07	□□□□□ -1.76
ECM2	YBR065C	BET1	P22804	142 aa		4.07	□□□□□ -1.76
ECM2	YBR065C	YKR032W	P36127	104 aa		4.07	□□□□□ -1.76
ECM2	YBR065C	EDC3	P39998	551 aa	Known RBP	4.07	□□□□□ -1.76
ECM2	YBR065C	YER188W	P40103	239 aa		4.07	□□□□□ -1.76
ECM2	YBR065C	ESP1	Q03018	1630 aa		4.06	□□□□□ -1.76
ECM2	YBR065C	CNB1	P25296	175 aa		4.06	□□□□□ -1.76
ECM2	YBR065C	ARO7	P32178	256 aa		4.06	□□□□□ -1.76
ECM2	YBR065C	YAP3	P38749	330 aa		4.06	□□□□□ -1.76
ECM2	YBR065C	AIM2	P39721	246 aa		4.06	□□□□□ -1.76
ECM2	YBR065C	TIF34	P40217	347 aa	Known RBP	4.06	□□□□□ -1.76
ECM2	YBR065C	SOK1	P40317	901 aa		4.06	□□□□□ -1.76
ECM2	YBR065C	BUD13	P46947	266 aa	Predicted RBP	4.06	□□□□□ -1.76
ECM2	YBR065C	ARP3	P47117	449 aa	Known RBP	4.06	□□□□□ -1.76
ECM2	YBR065C	YLR031W	Q07978	186 aa		4.06	□□□□□ -1.76
ECM2	YBR065C	RDI1	Q12434	202 aa		4.06	□□□□□ -1.76
ECM2	YBR065C	Q0255	P03881	472 aa		4.05	□□□□□ -1.76
ECM2	YBR065C	MID2	P36027	376 aa		4.05	□□□□□ -1.76
ECM2	YBR065C	PRM10	P42946	383 aa		4.05	□□□□□ -1.76
ECM2	YBR065C	YJR111C	P47148	283 aa	Known RBP	4.05	□□□□□ -1.76
ECM2	YBR065C	YDR476C	Q03362	224 aa		4.05	□□□□□ -1.76
ECM2	YBR065C	YDR114C	Q04597	100 aa		4.05	□□□□□ -1.76
ECM2	YBR065C	DYN3	Q04949	312 aa		4.05	□□□□□ -1.76
ECM2	YBR065C	NSL1	Q12143	216 aa		4.05	□□□□□ -1.76
ECM2	YBR065C	YPR014C	Q6B0W2	109 aa		4.05	□□□□□ -1.76
ECM2	YBR065C	CDC8	P00572	216 aa		4.04	□□□□□ -1.76
ECM2	YBR065C	RPL9A	P05738	191 aa	Known RBP	4.04	□□□□□ -1.76
ECM2	YBR065C	URA5	P13298	226 aa	Known RBP	4.04	□□□□□ -1.76
ECM2	YBR065C	SEC17	P32602	292 aa		4.04	□□□□□ -1.76
ECM2	YBR065C	ICE2	P40499	491 aa		4.04	□□□□□ -1.76
ECM2	YBR065C	LSM1	P47017	172 aa	Known RBP	4.04	□□□□□ -1.76
ECM2	YBR065C	RPL9B	P51401	191 aa	Known RBP	4.04	□□□□□ -1.76
ECM2	YBR065C	YDR249C	Q03787	373 aa		4.04	□□□□□ -1.76
ECM2	YBR065C	PSF1	Q12488	208 aa		4.04	□□□□□ -1.76
ECM2	YBR065C	MHT1	Q12525	324 aa		4.04	□□□□□ -1.76
ECM2	YBR065C	SCC2	Q04002	1493 aa		4.04	□□□□□ -1.76
ECM2	YBR065C	RPB3	P16370	318 aa	Known RBP	4.03	□□□□□ -1.76
ECM2	YBR065C	ACP1	P32463	125 aa		4.03	□□□□□ -1.76
ECM2	YBR065C	YKL102C	P34249	101 aa		4.03	□□□□□ -1.76
ECM2	YBR065C	YGR026W	P53217	278 aa		4.03	□□□□□ -1.76
ECM2	YBR065C	NQM1	P53228	333 aa	Predicted RBP	4.03	□□□□□ -1.76
ECM2	YBR065C	HNT1	Q04344	158 aa	Known RBP	4.03	□□□□□ -1.76
ECM2	YBR065C	YPR127W	Q06494	345 aa		4.03	□□□□□ -1.76
ECM2	YBR065C	MCP1	Q12106	302 aa		4.03	□□□□□ -1.76
ECM2	YBR065C	SIN3	P22579	1536 aa		4.02	□□□□□ -1.77
ECM2	YBR065C	PET9	P18239	318 aa	Known RBP	4.02	□□□□□ -1.77
ECM2	YBR065C	AVT2	P39981	480 aa		4.02	□□□□□ -1.77
ECM2	YBR065C	PIR5	P46999	287 aa		4.02	□□□□□ -1.77
ECM2	YBR065C	GPI17	Q04080	534 aa		4.02	□□□□□ -1.77
ECM2	YBR065C	HPT1	Q04178	221 aa	Known RBP	4.02	□□□□□ -1.77
ECM2	YBR065C	MPD1	Q12404	318 aa	Known RBP	4.02	□□□□□ -1.77
ECM2	YBR065C	DOP1	Q03921	1698 aa		4.01	□□□□□ -1.77
ECM2	YBR065C	REP2	P03872	296 aa		4.01	□□□□□ -1.77
ECM2	YBR065C	RPS23A	P0CX29	145 aa	Known RBP	4.01	□□□□□ -1.77
ECM2	YBR065C	RPS23B	P0CX30	145 aa		4.01	□□□□□ -1.77
ECM2	YBR065C	PET54	P10834	293 aa		4.01	□□□□□ -1.77
ECM2	YBR065C	BUB2	P26448	306 aa	Predicted RBP	4.01	□□□□□ -1.77
ECM2	YBR065C	KDX1	P36005	433 aa		4.01	□□□□□ -1.77
ECM2	YBR065C	RSM25	P40496	264 aa		4.01	□□□□□ -1.77
ECM2	YBR065C	DSK2	P48510	373 aa		4.01	□□□□□ -1.77
ECM2	YBR065C	TRM12	Q04235	462 aa		4.01	□□□□□ -1.77
ECM2	YBR065C	YOR268C	Q08734	132 aa		4.01	□□□□□ -1.77
ECM2	YBR065C	TRM732	Q03496	1420 aa		4.01	□□□□□ -1.77
ECM2	YBR065C	NUP170	P38181	1502 aa		4	□□□□□ -1.77
ECM2	YBR065C	NOP1	P15646	327 aa	Known RBP	4	□□□□□ -1.77
ECM2	YBR065C	YCR023C	P25351	611 aa		4	□□□□□ -1.77
ECM2	YBR065C	MPA43	P53583	542 aa	Predicted RBP	4	□□□□□ -1.77
ECM2	YBR065C	APJ1	P53940	528 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 27 ms