RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W FRE7Q12333 620 aa6.27□□□□□ -1.41
TOD6YBL054W YPR071WQ12346 211 aa6.27□□□□□ -1.41
TOD6YBL054W PAU17Q12370 124 aa6.27□□□□□ -1.41
TOD6YBL054W YOR343CQ12484 108 aa6.27□□□□□ -1.41
TOD6YBL054W FMP49A0A023PZB3 126 aa6.27□□□□□ -1.41
TOD6YBL054W YMR084WA2P2R3 262 aa6.27□□□□□ -1.41
TOD6YBL054W VMA3P25515 160 aa6.27□□□□□ -1.41
TOD6YBL054W DAL3P32459 195 aa6.27□□□□□ -1.41
TOD6YBL054W DAD2P36162 133 aa6.27□□□□□ -1.41
TOD6YBL054W PIC2P40035 300 aa6.27□□□□□ -1.41
TOD6YBL054W CIN5P40917 295 aa6.27□□□□□ -1.41
TOD6YBL054W YFR054CP43622 192 aa6.27□□□□□ -1.41
TOD6YBL054W DAL4Q04895 635 aa6.27□□□□□ -1.41
TOD6YBL054W CTS2Q06350 511 aa6.27□□□□□ -1.41
TOD6YBL054W ERV1P27882 189 aa6.26□□□□□ -1.41
TOD6YBL054W RPB11P38902 120 aa6.26□□□□□ -1.41
TOD6YBL054W POP2P39008 433 aa6.26□□□□□ -1.41
TOD6YBL054W ZIM17P42844 174 aa6.26□□□□□ -1.41
TOD6YBL054W MIM1Q08176 113 aa6.26□□□□□ -1.41
TOD6YBL054W COX2P00410 251 aa6.25□□□□□ -1.41
TOD6YBL054W SPO7P18410 259 aa6.25□□□□□ -1.41
TOD6YBL054W UTR5P32630 166 aa6.25□□□□□ -1.41
TOD6YBL054W DOG1P38774 246 aa6.25□□□□□ -1.41
TOD6YBL054W YER188WP40103 239 aa6.25□□□□□ -1.41
TOD6YBL054W PDR17P53844 350 aa6.25□□□□□ -1.41
TOD6YBL054W YPL039WQ03080 316 aa6.25□□□□□ -1.41
TOD6YBL054W TSA2Q04120 196 aa6.25□□□□□ -1.41
TOD6YBL054W NAT3Q06504 195 aa6.25□□□□□ -1.41
TOD6YBL054W YFT2Q06676 274 aa6.25□□□□□ -1.41
TOD6YBL054W TPT1Q12272 230 aaKnown RBP6.25□□□□□ -1.41
TOD6YBL054W TOM1Q03280 3268 aa6.25□□□□□ -1.41
TOD6YBL054W OCH1P31755 480 aa6.24□□□□□ -1.41
TOD6YBL054W YKL187CP34231 750 aa6.24□□□□□ -1.41
TOD6YBL054W YKL102CP34249 101 aa6.24□□□□□ -1.41
TOD6YBL054W PAU16P35994 123 aa6.24□□□□□ -1.41
TOD6YBL054W SHB17P36136 271 aaKnown RBP6.24□□□□□ -1.41
TOD6YBL054W AME1P38313 324 aa6.24□□□□□ -1.41
TOD6YBL054W WSC4P38739 605 aa6.24□□□□□ -1.41
TOD6YBL054W MED6P38782 295 aa6.24□□□□□ -1.41
TOD6YBL054W LYS1P38998 373 aaRIP-Chip data6.24□□□□□ -1.41 RIP-Chip
TOD6YBL054W OSW5P40219 148 aa6.24□□□□□ -1.41
TOD6YBL054W MID1P41821 548 aa6.24□□□□□ -1.41
TOD6YBL054W SNO3P43544 222 aa6.24□□□□□ -1.41
TOD6YBL054W LOC1P43586 204 aaPredicted RBP6.24□□□□□ -1.41
TOD6YBL054W HSV2P50079 448 aaPredicted RBP6.24□□□□□ -1.41
TOD6YBL054W LEE1Q02799 301 aaKnown RBP6.24□□□□□ -1.41
TOD6YBL054W COQ11Q05892 277 aa6.24□□□□□ -1.41
TOD6YBL054W IRC19Q07843 230 aa6.24□□□□□ -1.41
TOD6YBL054W MCH4Q08268 501 aa6.24□□□□□ -1.41
TOD6YBL054W YPL264CQ08980 353 aa6.24□□□□□ -1.41
TOD6YBL054W YLR365WQ7LIF2 110 aa6.24□□□□□ -1.41
TOD6YBL054W DAT1P13483 248 aaKnown RBP6.23□□□□□ -1.41
TOD6YBL054W AIM17P23180 465 aaKnown RBP6.23□□□□□ -1.41
TOD6YBL054W SPS18P32572 300 aa6.23□□□□□ -1.41
TOD6YBL054W YNR014WP53719 212 aa6.23□□□□□ -1.41
TOD6YBL054W IZH1Q03419 316 aa6.23□□□□□ -1.41
TOD6YBL054W HED1Q03937 162 aa6.23□□□□□ -1.41
TOD6YBL054W UPS3Q04006 179 aa6.23□□□□□ -1.41
TOD6YBL054W YDR286CQ05530 114 aa6.23□□□□□ -1.41
TOD6YBL054W HRI1Q05905 244 aaKnown RBP6.23□□□□□ -1.41
TOD6YBL054W YPR174CQ06616 221 aaPredicted RBP6.23□□□□□ -1.41
TOD6YBL054W IZH3Q07959 543 aa6.23□□□□□ -1.41
TOD6YBL054W YOL024WQ08172 172 aa6.23□□□□□ -1.41
TOD6YBL054W YOL029CQ08187 201 aa6.23□□□□□ -1.41
TOD6YBL054W OPI10Q08202 246 aa6.23□□□□□ -1.41
TOD6YBL054W TGS1Q12052 315 aa6.23□□□□□ -1.41
TOD6YBL054W YDL157CQ12082 118 aa6.23□□□□□ -1.41
TOD6YBL054W NAG1Q8TGN9 163 aa6.23□□□□□ -1.41
TOD6YBL054W MES1P00958 751 aaKnown RBP6.23□□□□□ -1.41
TOD6YBL054W RPS22AP0C0W1 130 aaKnown RBP6.23□□□□□ -1.41
TOD6YBL054W QCR9P22289 66 aa6.23□□□□□ -1.41
TOD6YBL054W SUA7P29055 345 aaPredicted RBP6.23□□□□□ -1.41
TOD6YBL054W ALG14P38242 237 aa6.23□□□□□ -1.41
TOD6YBL054W PAC2P39937 518 aa6.23□□□□□ -1.41
TOD6YBL054W YER134CP40081 178 aa6.23□□□□□ -1.41
TOD6YBL054W ATF1P40353 525 aa6.23□□□□□ -1.41
TOD6YBL054W MIC26P50087 233 aa6.23□□□□□ -1.41
TOD6YBL054W PEX21P50091 288 aa6.23□□□□□ -1.41
TOD6YBL054W THG1P53215 237 aaKnown RBP6.23□□□□□ -1.41
TOD6YBL054W DUG3P53871 357 aa6.23□□□□□ -1.41
TOD6YBL054W RPL21AQ02753 160 aaKnown RBP6.23□□□□□ -1.41
TOD6YBL054W IRC13Q08630 104 aa6.23□□□□□ -1.41
TOD6YBL054W HUT1Q12520 339 aa6.23□□□□□ -1.41
TOD6YBL054W RPL21BQ12672 160 aaKnown RBP6.23□□□□□ -1.41
TOD6YBL054W YPR170W-BP0C5R9 85 aa6.22□□□□□ -1.41
TOD6YBL054W PCL1P24867 279 aa6.22□□□□□ -1.41
TOD6YBL054W QDR3P38227 689 aa6.22□□□□□ -1.41
TOD6YBL054W YJL193WP39542 402 aa6.22□□□□□ -1.41
TOD6YBL054W YND1P40009 630 aa6.22□□□□□ -1.41
TOD6YBL054W GPI2P46961 280 aa6.22□□□□□ -1.41
TOD6YBL054W YNR040WP53736 256 aa6.22□□□□□ -1.41
TOD6YBL054W YPL077CQ02831 240 aa6.22□□□□□ -1.41
TOD6YBL054W TRI1Q05024 226 aa6.22□□□□□ -1.41
TOD6YBL054W FRE8Q12209 686 aa6.22□□□□□ -1.41
TOD6YBL054W HUG1Q6Q5K6 68 aa6.22□□□□□ -1.41
TOD6YBL054W YSF3P0C074 85 aaPredicted RBP6.21□□□□□ -1.42
TOD6YBL054W FPR1P20081 114 aaKnown RBP6.21□□□□□ -1.42
TOD6YBL054W CWP1P28319 239 aa6.21□□□□□ -1.42
TOD6YBL054W PMU1P36069 295 aa6.21□□□□□ -1.42
TOD6YBL054W CUP9P41817 306 aa6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms