RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 NCK2O43639 380 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 COBLO75128 1261 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 ATP5HO75947 161 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 DEXIO95424 95 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 RPN1P04843 607 aaKnown RBP6.32□□□□□ -1.4
CASC19-260ENST00000641828 IGKV5-2P06315 115 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 IFIT1P09914 478 aaKnown RBP6.32□□□□□ -1.4
CASC19-260ENST00000641828 CCNB1P14635 433 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 LIFRP42702 1097 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 PLS1Q14651 629 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 MYBPC3Q14896 1274 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 TRADDQ15628 312 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 NKG7Q16617 165 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 PARP6Q2NL67 630 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 CCDC152Q4G0S7 254 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 PABPC1LQ4VXU2 614 aaKnown RBP6.32□□□□□ -1.4
CASC19-260ENST00000641828 CCDC178Q5BJE1 867 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 EXOSC6Q5RKV6 272 aaKnown RBP6.32□□□□□ -1.4
CASC19-260ENST00000641828 HEATR6Q6AI08 1181 aaKnown RBP6.32□□□□□ -1.4
CASC19-260ENST00000641828 OR52E8Q6IFG1 317 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 MICU3Q86XE3 530 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 DDX42Q86XP3 938 aaKnown RBP eCLIP6.32□□□□□ -1.4
CASC19-260ENST00000641828 DMRTC2Q8IXT2 367 aaPredicted RBP6.32□□□□□ -1.4
CASC19-260ENST00000641828 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.32□□□□□ -1.4
CASC19-260ENST00000641828 UBR7Q8N806 425 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 MDM1Q8TC05 714 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 DYDC1Q8WWB3 177 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 PPP1R14AQ96A00 147 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 PGM2Q96G03 612 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 RBM17Q96I25 401 aaKnown RBP6.32□□□□□ -1.4
CASC19-260ENST00000641828 NEUROD6Q96NK8 337 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 INPP4AQ96PE3 977 aaPredicted RBP6.32□□□□□ -1.4
CASC19-260ENST00000641828 UBAC1Q9BSL1 405 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 RXFP1Q9HBX9 757 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 CABP5Q9NP86 173 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 ABCF3Q9NUQ8 709 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 INTS9Q9NV88 658 aaKnown RBP6.32□□□□□ -1.4
CASC19-260ENST00000641828 KCNK4Q9NYG8 393 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 CRIM1Q9NZV1 1036 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 ARHGAP20Q9P2F6 1191 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 STK38LQ9Y2H1 464 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 USP15Q9Y4E8 981 aaPredicted RBP6.32□□□□□ -1.4
CASC19-260ENST00000641828 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.32□□□□□ -1.4
CASC19-260ENST00000641828 SLC4A7Q9Y6M7 1214 aa6.32□□□□□ -1.4
CASC19-260ENST00000641828 XDHP47989 1333 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 AFDNP55196 1824 aaKnown RBP6.31□□□□□ -1.4
CASC19-260ENST00000641828 SSU72P8A0A1W2PR75 194 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 CCDC169A6NNP5 214 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 F8VZ95 297 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 CCDC188H7C350 402 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 PSMA7O14818 248 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 FOXP2O15409 715 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 CLEC3AO75596 197 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 OAS1P00973 400 aaKnown RBP6.31□□□□□ -1.4
CASC19-260ENST00000641828 MYL1P05976 194 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 RXRAP19793 462 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 NFKB2Q00653 900 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 AKAP4Q5JQC9 854 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 RNFT1Q5M7Z0 435 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 RNF220Q5VTB9 566 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 TMC3Q7Z5M5 1100 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 LDHDQ86WU2 507 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 C2CD5Q86YS7 1000 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 ENDOVQ8N8Q3 282 aaKnown RBP6.31□□□□□ -1.4
CASC19-260ENST00000641828 IGDCC4Q8TDY8 1250 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 SCFD2Q8WU76 684 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 DNAJC9Q8WXX5 260 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 CAPNS2Q96L46 248 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 GPR101Q96P66 508 aaPredicted RBP6.31□□□□□ -1.4
CASC19-260ENST00000641828 RPS6KC1Q96S38 1066 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 BLZF1Q9H2G9 400 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 PRDM6Q9NQX0 595 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 DDX21Q9NR30 783 aaKnown RBP eCLIP6.31□□□□□ -1.4
CASC19-260ENST00000641828 FAM114A2Q9NRY5 505 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 DLGAP2Q9P1A6 1054 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 APEX2Q9UBZ4 518 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 RPL26L1Q9UNX3 145 aaKnown RBP6.31□□□□□ -1.4
CASC19-260ENST00000641828 LTBP1Q14766 1721 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 NID2Q14112 1375 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 HEG1Q9ULI3 1381 aa6.31□□□□□ -1.4
CASC19-260ENST00000641828 THSD7BQ9C0I4 1608 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 A8MUI8 341 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 RBAK-RBAKDNI3L0D1 243 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 CA12O43570 354 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 LMNAP02545 664 aaKnown RBP6.3□□□□□ -1.4
CASC19-260ENST00000641828 ITGAVP06756 1048 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 PDHA1P08559 390 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 PLEKP08567 350 aaPredicted RBP6.3□□□□□ -1.4
CASC19-260ENST00000641828 NUDT17P0C025 328 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 TPBGLP0DKB5 382 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 XBP1P17861 261 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 STAT6P42226 847 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 TUBP50607 506 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 RAD23BP54727 409 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 PROSER3Q2NL68 480 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 BRDTQ58F21 947 aaPredicted RBP6.3□□□□□ -1.4
CASC19-260ENST00000641828 SH2D4BQ5SQS7 431 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 CYB5R4Q7L1T6 521 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 SCUBE1Q8IWY4 988 aa6.3□□□□□ -1.4
CASC19-260ENST00000641828 BAHD1Q8TBE0 780 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms