RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 DMGDHQ9UI17 866 aaKnown RBP8.86□□□□□ -0.99
PNKP-231ENST00000640501 PCDHGC3Q9UN70 934 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 COG5Q9UP83 839 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 NUB1Q9Y5A7 615 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 PTPRJQ12913 1337 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 PASKQ96RG2 1323 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 A6NJR5 290 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 RAD51CO43502 376 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 SASH3O75995 380 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 PROSCO94903 275 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 STAU1O95793 577 aaKnown RBP8.85□□□□□ -0.99
PNKP-231ENST00000640501 ZNF286BP0CG31 522 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 SMPD1P17405 629 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 TNFSF9P41273 254 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 FNTAP49354 379 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 ZNF132P52740 706 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 RNASE9P60153 205 aaKnown RBP8.85□□□□□ -0.99
PNKP-231ENST00000640501 MYL6P60660 151 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 NOMO3P69849 1222 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 RBP5P82980 135 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 SLC7A5Q01650 507 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 LMNB2Q03252 620 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 PIGHQ14442 188 aaPredicted RBP8.85□□□□□ -0.99
PNKP-231ENST00000640501 SPDYCQ5MJ68 293 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 NAA35Q5VZE5 725 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 NOTUMQ6P988 496 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 SLC27A1Q6PCB7 646 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 DCUN1D2Q6PH85 259 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 MON1BQ7L1V2 547 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 PALB2Q86YC2 1186 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 HACE1Q8IYU2 909 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 NME8Q8N427 588 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 MREGQ8N565 214 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 ZNF606Q8WXB4 792 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 RBM41Q96IZ5 413 aaKnown RBP8.85□□□□□ -0.99
PNKP-231ENST00000640501 APBA2Q99767 749 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 AP1M1Q9BXS5 423 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 TRIM6Q9C030 488 aaPredicted RBP8.85□□□□□ -0.99
PNKP-231ENST00000640501 PDZD7Q9H5P4 517 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 VRTNQ9H8Y1 702 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 IFT122Q9HBG6 1241 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 SPC25Q9HBM1 224 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 EHD2Q9NZN4 543 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 MTRF1LQ9UGC7 380 aaKnown RBP8.85□□□□□ -0.99
PNKP-231ENST00000640501 HPCAL4Q9UM19 191 aa8.85□□□□□ -0.99
PNKP-231ENST00000640501 MROH7Q68CQ1 1323 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 A0A1B0GUA9 196 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 M0QZ92 97 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 ABLIM1O14639 778 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 TLR3O15455 904 aaKnown RBP8.84□□□□□ -0.99
PNKP-231ENST00000640501 DYNC1LI2O43237 492 aaPredicted RBP8.84□□□□□ -0.99
PNKP-231ENST00000640501 GAS8O95995 478 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 ALDH1A1P00352 501 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 F2P00734 622 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 CXCL8P10145 99 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 CD58P19256 250 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 MMP8P22894 467 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 RRM1P23921 792 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 GRM5P41594 1212 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 CDR1P51861 262 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 DRG2P55039 364 aaKnown RBP8.84□□□□□ -0.99
PNKP-231ENST00000640501 OSTNP61366 133 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 RALGAPA2Q2PPJ7 1873 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 WDR72Q3MJ13 1102 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 SEZ6Q53EL9 994 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 ZBTB41Q5SVQ8 909 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 MORN1Q5T089 497 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 SPOPLQ6IQ16 392 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 RGMBQ6NW40 437 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 DNAJC24Q6P3W2 148 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 CATSPER4Q7RTX7 472 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 RSPH3Q86UC2 560 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 TLK2Q86UE8 772 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 ERICH1Q86X53 443 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 BBOF1Q8ND07 529 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 BEST2Q8NFU1 509 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 FEZF2Q8TBJ5 459 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 CCHCR1Q8TD31 782 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 IPO4Q8TEX9 1081 aaKnown RBP8.84□□□□□ -0.99
PNKP-231ENST00000640501 CPA5Q8WXQ8 436 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 EVPLQ92817 2033 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 EXOC4Q96A65 974 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 CYFIP2Q96F07 1278 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 NCAPGQ9BPX3 1015 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 UBXN6Q9BZV1 441 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 LHX5Q9H2C1 402 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 GOLPH3Q9H4A6 298 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 SYNCQ9H7C4 482 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 APOBEC3GQ9HC16 384 aaKnown RBP8.84□□□□□ -0.99
PNKP-231ENST00000640501 DDX56Q9NY93 547 aaKnown RBP8.84□□□□□ -0.99
PNKP-231ENST00000640501 PSD3Q9NYI0 1048 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 NFU1Q9UMS0 254 aa8.84□□□□□ -0.99
PNKP-231ENST00000640501 ANK1P16157 1881 aa8.83□□□□□ -1
PNKP-231ENST00000640501 LACTBL1A8MY62 500 aa8.83□□□□□ -1
PNKP-231ENST00000640501 TNPO2O14787 897 aaKnown RBP8.83□□□□□ -1
PNKP-231ENST00000640501 POLR3GO15318 223 aaPredicted RBP8.83□□□□□ -1
PNKP-231ENST00000640501 B4GALT5O43286 388 aa8.83□□□□□ -1
PNKP-231ENST00000640501 TSPAN1O60635 241 aa8.83□□□□□ -1
PNKP-231ENST00000640501 ZMYND10O75800 440 aa8.83□□□□□ -1
PNKP-231ENST00000640501 ECEL1O95672 775 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms