RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	TPH2	Q8IWU9	490 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	PIGK	Q92643	395 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	DYDC2	Q96IM9	177 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	NFKBIZ	Q9BYH8	718 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	PDZD7	Q9H5P4	517 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	USP20	Q9Y2K6	914 aa		12.91	□□□□□ -0.34
PAX6-238	ENST00000638755	CCDC194	A0A1B0GVG4	234 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	FAM221B	A6H8Z2	402 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	N4BP3	O15049	544 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	APBB3	O95704	486 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	PRB1	P04280	392 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	CPB1	P15086	417 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	LIG1	P18858	919 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	PLCB2	Q00722	1185 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	C19orf57	Q0VDD7	668 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	NECTIN1	Q15223	517 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	PTPA	Q15257	358 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	NCAPH2	Q6IBW4	605 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	RNF19B	Q6ZMZ0	732 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	BPIFB1	Q8TDL5	484 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	UROC1	Q96N76	676 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	PPP1R10	Q96QC0	940 aa	Known RBP	12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	TPSD1	Q9BZJ3	242 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	POLR3F	Q9H1D9	316 aa	Predicted RBP	12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	CCDC86	Q9H6F5	360 aa	Known RBP	12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	ZSWIM4	Q9H7M6	989 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	PRMT7	Q9NVM4	692 aa	Predicted RBP	12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	AFF4	Q9UHB7	1163 aa	Known RBP	12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	APC2	O95996	2303 aa		12.9	□□□□□ -0.34
PAX6-238	ENST00000638755	PRAMEF12	O95522	483 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	FAM193A	P78312	1265 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	LMAN2	Q12907	356 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	PRPF4B	Q13523	1007 aa	Known RBP	12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	DMC1	Q14565	340 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	EPHA7	Q15375	998 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	USP39	Q53GS9	565 aa	Known RBP	12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	TRIM61	Q5EBN2	209 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	GPR158	Q5T848	1215 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	PPP4R3CP	Q6ZMV5	832 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	MAEA	Q7L5Y9	396 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	DHX32	Q7L7V1	743 aa	Known RBP	12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	TMC8	Q8IU68	726 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	RPLP0P6	Q8NHW5	317 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	PRIMPOL	Q96LW4	560 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	CCDC43	Q96MW1	224 aa	Known RBP	12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	ADPGK	Q9BRR6	497 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	NUSAP1	Q9BXS6	441 aa	Known RBP	12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	SLC26A6	Q9BXS9	759 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	LRRC3	Q9BY71	257 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	C22orf23	Q9BZE7	217 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	ATXN3L	Q9H3M9	355 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	THG1L	Q9NWX6	298 aa	Known RBP	12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	EBF1	Q9UH73	591 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	RAX	Q9Y2V3	346 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	YIPF1	Q9Y548	306 aa		12.89	□□□□□ -0.35
PAX6-238	ENST00000638755	TRDMT1	O14717	391 aa	Known RBP	12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	SYN3	O14994	580 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	MARCH6	O60337	910 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	DGAT1	O75907	488 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	BCKDHB	P21953	392 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	U2AF2	P26368	475 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	RCAN1	P53805	252 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	SOX4	Q06945	474 aa	Predicted RBP	12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	MRPL58	Q14197	206 aa	Known RBP	12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	INF2	Q27J81	1249 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	PPP4R3A	Q6IN85	833 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	MOXD1	Q6UVY6	613 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	PIP4P1	Q86T03	277 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	MDM1	Q8TC05	714 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	FAM20A	Q96MK3	541 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	SMG9	Q9H0W8	520 aa	Known RBP	12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	FBRSL1	Q9HCM7	1045 aa	Known RBP	12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	GPRC5C	Q9NQ84	441 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	GKN1	Q9NS71	199 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	CACNA2D2	Q9NY47	1150 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	OBP2A	Q9NY56	170 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	NUB1	Q9Y5A7	615 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	GON4L	Q3T8J9	2241 aa		12.88	□□□□□ -0.35
PAX6-238	ENST00000638755	TRIP11	Q15643	1979 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	OTOL1	A6NHN0	477 aa	Predicted RBP	12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	PODXL	O00592	558 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	ENG	P17813	658 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	MCM2	P49736	904 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	EPHB3	P54753	998 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	PSMD2	Q13200	908 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	SEMA3B	Q13214	749 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	ARHGAP15	Q53QZ3	475 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	EEF1DP3	Q658K8	133 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	NAIF1	Q69YI7	327 aa	Predicted RBP	12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	TRIM68	Q6AZZ1	485 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	ZNF280D	Q6N043	979 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	GAREM2	Q75VX8	874 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	SYT13	Q7L8C5	426 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	RAB44	Q7Z6P3	723 aa	Predicted RBP	12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	C11orf74	Q86VG3	221 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	ZBTB8OS	Q8IWT0	167 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	TSTD1	Q8NFU3	115 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	CHFR	Q96EP1	664 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	PGLYRP2	Q96PD5	576 aa		12.87	□□□□□ -0.35
PAX6-238	ENST00000638755	DNAJC25	Q9H1X3	360 aa		12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms