RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 ZNF200P98182 395 aaPredicted RBP6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 KCNA10Q16322 511 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 PTGISQ16647 500 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 WDR72Q3MJ13 1102 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 C11orf63Q6NUN7 778 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 SCARA5Q6ZMJ2 495 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 RSRC2Q7L4I2 434 aaKnown RBP6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 TMEM192Q8IY95 271 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 LRRC52Q8N7C0 313 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 C1orf127Q8N9H9 656 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 TMEM35BQ8NCS4 154 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 ARRDC4Q8NCT1 418 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 KLHDC9Q8NEP7 349 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 ZNF564Q8TBZ8 553 aaPredicted RBP6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 DDX1Q92499 740 aaKnown RBP6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 ANKRD7Q92527 254 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 VCPIP1Q96JH7 1222 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 SNX27Q96L92 541 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 GLT1D1Q96MS3 346 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 NAP1L3Q99457 506 aaPredicted RBP6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 ARID3AQ99856 593 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 BEGAINQ9BUH8 593 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 APOL6Q9BWW8 343 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 PLVAPQ9BX97 442 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 ZNF518BQ9C0D4 1074 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 VRTNQ9H8Y1 702 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 HMX1Q9NP08 348 aaPredicted RBP6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 AVENQ9NQS1 362 aaPredicted RBP6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 CHST12Q9NRB3 414 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 SAGE1Q9NXZ1 904 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 CNOT8Q9UFF9 292 aaKnown RBP6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 PARP2Q9UGN5 583 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 SALL4Q9UJQ4 1053 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 KIAA1257Q9ULG3 409 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 UBQLN1Q9UMX0 589 aaKnown RBP6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 CDY2AQ9Y6F7 541 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 CITO14578 2027 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 DOCK3Q8IZD9 2030 aa6.72□□□□□ -1.33
CACNA1D-227ENST00000637844 PDCD11Q14690 1871 aaKnown RBP6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 TMEM110-MUSTN1A8MSY1 372 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 SPOPO43791 374 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 SRGAP2O75044 1071 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 CAND2O75155 1236 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 RECQL4O94761 1208 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 MTA2O94776 668 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 CYP1A1P04798 512 aaPredicted RBP6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 CYP1A2P05177 515 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 WEE2P0C1S8 567 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 SKIP12755 728 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 UNGP13051 313 aaPredicted RBP6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 CD19P15391 556 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 YY1P25490 414 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 HOXA11P31270 313 aaPredicted RBP6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 THPOP40225 353 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 ASPAP45381 313 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 RAB27AP51159 221 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 DNA2P51530 1060 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 ZNF132P52740 706 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 ACLYP53396 1101 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 SNX16P57768 344 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 IRX5P78411 483 aaPredicted RBP6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 CENPCQ03188 943 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 TAP1Q03518 808 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 ITIH3Q06033 890 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 C1QBPQ07021 282 aaKnown RBP6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 TRIM32Q13049 653 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 PAK2Q13177 524 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 PTK7Q13308 1070 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 HIC1Q14526 733 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 STILQ15468 1287 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 SV2CQ496J9 727 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 NAA35Q5VZE5 725 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 GDF6Q6KF10 455 aaPredicted RBP6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 TMCO3Q6UWJ1 677 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 ZNF572Q7Z3I7 529 aaPredicted RBP6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 SLFN11Q7Z7L1 901 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 RPAINQ86UA6 219 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 SERINC5Q86VE9 423 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 UBR7Q8N806 425 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 LRRC57Q8N9N7 239 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 USP38Q8NB14 1042 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 PPP1R13LQ8WUF5 828 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 ZNF606Q8WXB4 792 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 RUBCNQ92622 972 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 ELMO3Q96BJ8 720 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 ARHGEF26Q96DR7 871 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 FAM84AQ96KN4 292 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 RPS6KC1Q96S38 1066 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 MMS19Q96T76 1030 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 PCDHB18PQ96TA0 734 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 PSMB7Q99436 277 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 TSEN34Q9BSV6 310 aaKnown RBP6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 NUP85Q9BW27 656 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 TLR10Q9BXR5 811 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 EIF2AQ9BY44 585 aaKnown RBP6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 SEZ6LQ9BYH1 1024 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 BCO2Q9BYV7 579 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 MIS12Q9H081 205 aa6.71□□□□□ -1.34
CACNA1D-227ENST00000637844 XYLT2Q9H1B5 865 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms