RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 SMG5Q9UPR3 1016 aaKnown RBP19.48■□□□□ 0.71
CIITA-215ENST00000637439 CEP250Q9BV73 2442 aa19.48■□□□□ 0.71
CIITA-215ENST00000637439 MYH11P35749 1972 aa19.48■□□□□ 0.71
CIITA-215ENST00000637439 MED19A0JLT2 244 aaPredicted RBP19.47■□□□□ 0.71
CIITA-215ENST00000637439 SHISA7A6NL88 538 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 M0QZQ0 153 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 XPOTO43592 962 aaKnown RBP19.47■□□□□ 0.71
CIITA-215ENST00000637439 OAZ2O95190 189 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 CLTAP09496 248 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 MAPTP10636 758 aaKnown RBP19.47■□□□□ 0.71
CIITA-215ENST00000637439 MYL4P12829 197 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 CYP3A5P20815 502 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 LRPAP1P30533 357 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 GDI1P31150 447 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 MATR3P43243 847 aaKnown RBP eCLIP19.47■□□□□ 0.71
CIITA-215ENST00000637439 ZRSR1Q15695 479 aaKnown RBP19.47■□□□□ 0.71
CIITA-215ENST00000637439 RSPO4Q2I0M5 234 aaPredicted RBP19.47■□□□□ 0.71
CIITA-215ENST00000637439 RILPL1Q5EBL4 403 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 RNF19BQ6ZMZ0 732 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 HS6ST3Q8IZP7 471 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 ZNF687Q8N1G0 1237 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 FAM3CQ92520 227 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 TSPAN18Q96SJ8 248 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 LARSQ9P2J5 1176 aaKnown RBP19.47■□□□□ 0.71
CIITA-215ENST00000637439 TUBGCP4Q9UGJ1 667 aa19.47■□□□□ 0.71
CIITA-215ENST00000637439 UBQLN1Q9UMX0 589 aaKnown RBP19.47■□□□□ 0.71
CIITA-215ENST00000637439 ZNF263O14978 683 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 MOSPD3O75425 235 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 CXCL8P10145 99 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 SCP2P22307 547 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 MLLT6P55198 1093 aaPredicted RBP19.46■□□□□ 0.71
CIITA-215ENST00000637439 RAD51AP2Q09MP3 1159 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 SEZ6Q53EL9 994 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 C1orf228Q6PIY5 440 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 TSSK4Q6SA08 328 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 USP37Q86T82 979 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 MFSD6LQ8IWD5 586 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 BEST2Q8NFU1 509 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 ZSCAN18Q8TBC5 510 aaPredicted RBP19.46■□□□□ 0.71
CIITA-215ENST00000637439 BICD1Q96G01 975 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 MSANTD3Q96H12 275 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 CDK5RAP3Q96JB5 506 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 ZSWIM3Q96MP5 696 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 PIAS3Q9Y6X2 628 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 GPR179Q6PRD1 2367 aa19.46■□□□□ 0.71
CIITA-215ENST00000637439 TTC26A0AVF1 554 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 OR6C75A6NL08 312 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 PRR5-ARHGAP8B1AHC4 643 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 CCR3P51677 355 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 EPHB3P54753 998 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 ARHGAP8P85298 464 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 ATP2C1P98194 919 aaPredicted RBP19.45■□□□□ 0.7
CIITA-215ENST00000637439 LMNB2Q03252 620 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 PPP2R3AQ06190 1150 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 YAF2Q8IY57 180 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 KIF12Q96FN5 646 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 SLITRK6Q9H5Y7 841 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 LMAN1LQ9HAT1 526 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 RAB23Q9ULC3 237 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 YIPF1Q9Y548 306 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 COL4A2P08572 1712 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 TICRRQ7Z2Z1 1910 aa19.45■□□□□ 0.7
CIITA-215ENST00000637439 PAX3P23760 479 aa19.44■□□□□ 0.7
CIITA-215ENST00000637439 VIPR2P41587 438 aa19.44■□□□□ 0.7
CIITA-215ENST00000637439 AARSP49588 968 aaKnown RBP eCLIP19.44■□□□□ 0.7
CIITA-215ENST00000637439 SLC12A3P55017 1021 aa19.44■□□□□ 0.7
CIITA-215ENST00000637439 GPR17Q13304 367 aa19.44■□□□□ 0.7
CIITA-215ENST00000637439 TEAD2Q15562 447 aa19.44■□□□□ 0.7
CIITA-215ENST00000637439 ZBTB6Q15916 424 aa19.44■□□□□ 0.7
CIITA-215ENST00000637439 MCTP1Q6DN14 999 aa19.44■□□□□ 0.7
CIITA-215ENST00000637439 DSTYKQ6XUX3 929 aa19.44■□□□□ 0.7
CIITA-215ENST00000637439 CSGALNACT1Q8TDX6 532 aa19.44■□□□□ 0.7
CIITA-215ENST00000637439 KCNN1Q92952 543 aa19.44■□□□□ 0.7
CIITA-215ENST00000637439 PNMA5Q96PV4 448 aa19.44■□□□□ 0.7
CIITA-215ENST00000637439 GMEB2Q9UKD1 530 aa19.44■□□□□ 0.7
CIITA-215ENST00000637439 F5P12259 2224 aa19.44■□□□□ 0.7
CIITA-215ENST00000637439 HEPACAM2A8MVW5 462 aa19.43■□□□□ 0.7
CIITA-215ENST00000637439 NRG2O14511 850 aaPredicted RBP19.43■□□□□ 0.7
CIITA-215ENST00000637439 FGF19O95750 216 aa19.43■□□□□ 0.7
CIITA-215ENST00000637439 PLA2G4BP0C869 781 aa19.43■□□□□ 0.7
CIITA-215ENST00000637439 GJA1P17302 382 aa19.43■□□□□ 0.7
CIITA-215ENST00000637439 ALDH1A3P47895 512 aa19.43■□□□□ 0.7
CIITA-215ENST00000637439 LIG4P49917 911 aa19.43■□□□□ 0.7
CIITA-215ENST00000637439 NCKAP1LP55160 1127 aa19.43■□□□□ 0.7
CIITA-215ENST00000637439 MYBPC2Q14324 1141 aa19.43■□□□□ 0.7
CIITA-215ENST00000637439 ARL6IP4Q66PJ3 421 aaKnown RBP19.43■□□□□ 0.7
CIITA-215ENST00000637439 HAUS6Q7Z4H7 955 aa19.43■□□□□ 0.7
CIITA-215ENST00000637439 CELF5Q8N6W0 485 aaKnown RBP19.43■□□□□ 0.7
CIITA-215ENST00000637439 SHKBP1Q8TBC3 707 aa19.43■□□□□ 0.7
CIITA-215ENST00000637439 ODF2LQ9ULJ1 636 aa19.43■□□□□ 0.7
CIITA-215ENST00000637439 ASB3Q9Y575 518 aa19.43■□□□□ 0.7
CIITA-215ENST00000637439 TIMM13Q9Y5L4 95 aaPredicted RBP19.43■□□□□ 0.7
CIITA-215ENST00000637439 VWA3AA6NCI4 1184 aa19.42■□□□□ 0.7
CIITA-215ENST00000637439 CHADO15335 359 aa19.42■□□□□ 0.7
CIITA-215ENST00000637439 SLC26A4O43511 780 aa19.42■□□□□ 0.7
CIITA-215ENST00000637439 TDGF1P13385 188 aa19.42■□□□□ 0.7
CIITA-215ENST00000637439 TYMPP19971 482 aa19.42■□□□□ 0.7
CIITA-215ENST00000637439 SPAG1Q07617 926 aa19.42■□□□□ 0.7
CIITA-215ENST00000637439 DUSP4Q13115 394 aa19.42■□□□□ 0.7
CIITA-215ENST00000637439 LRRC32Q14392 662 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms