RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 MAIP1Q8WWC4 291 aa15.31■□□□□ 0.04
PTBP1-221ENST00000635647 SHC3Q92529 594 aa15.31■□□□□ 0.04
PTBP1-221ENST00000635647 PITPNM3Q9BZ71 974 aa15.31■□□□□ 0.04
PTBP1-221ENST00000635647 USH1CQ9Y6N9 552 aa15.31■□□□□ 0.04
PTBP1-221ENST00000635647 IGF2BP3O00425 579 aaKnown RBP eCLIP15.3■□□□□ 0.043e-6■■□□□ 12.2
PTBP1-221ENST00000635647 CCND2P30279 289 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 KRT76Q01546 638 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 CXCL9Q07325 125 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 DRP2Q13474 957 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 TNFAIP1Q13829 316 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 EAPPQ56P03 285 aaPredicted RBP15.3■□□□□ 0.04
PTBP1-221ENST00000635647 SLC30A9Q6PML9 568 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 PALM2Q8IXS6 379 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 KCTD17Q8N5Z5 321 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 ATL2Q8NHH9 583 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 BSNDQ8WZ55 320 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 RBM15Q96T37 977 aaKnown RBP eCLIP15.3■□□□□ 0.044e-7■■■□□ 14.9
PTBP1-221ENST00000635647 OSBPL8Q9BZF1 889 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 TRIM4Q9C037 500 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 SAE1Q9UBE0 346 aaPredicted RBP15.3■□□□□ 0.04
PTBP1-221ENST00000635647 CCNE2O96020 404 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 ZSCAN5DPP0CG00 497 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 MMP13P45452 471 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 KCNJ2P63252 427 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 GTF2BQ00403 316 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 PGM5Q15124 567 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 MICALL2Q8IY33 904 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 TMEM161BQ8NDZ6 487 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 NENFQ9UMX5 172 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 hCG_2014768A0A024R1R8 64 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 ITIH2P19823 946 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 YWHAGP61981 247 aaKnown RBP eCLIP15.3■□□□□ 0.04
PTBP1-221ENST00000635647 CYP24A1Q07973 514 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 SETDB1Q15047 1291 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 CNGA2Q16280 664 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 MUM1Q2TAK8 710 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 C1orf220Q5T0J3 134 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 RFX8Q6ZV50 586 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 TRMT10CQ7L0Y3 403 aaKnown RBP15.3■□□□□ 0.04
PTBP1-221ENST00000635647 ZC3H18Q86VM9 953 aaKnown RBP15.3■□□□□ 0.04
PTBP1-221ENST00000635647 LRRN4Q8WUT4 740 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 DEFB129Q9H1M3 183 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 PRM3Q9NNZ6 103 aa15.3■□□□□ 0.04
PTBP1-221ENST00000635647 USP15Q9Y4E8 981 aaPredicted RBP15.3■□□□□ 0.04
PTBP1-221ENST00000635647 A8MUI8 341 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 PSAPP07602 524 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 GRM1Q13255 1194 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 CLEC16AQ2KHT3 1053 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 Q3C1V9 767 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 ANO5Q75V66 913 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 RHPN2Q8IUC4 686 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 ZBED8Q8IZ13 594 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 MORC4Q8TE76 937 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 PDCD2LQ9BRP1 358 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 MRIQ9BWK5 157 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 JPH1Q9HDC5 661 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-221ENST00000635647 SPATA31A6Q5VVP1 1343 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 WNT10BO00744 389 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 CTCFP49711 727 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-221ENST00000635647 C6orf89Q6UWU4 347 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 BZW1Q7L1Q6 419 aaKnown RBP15.29■□□□□ 0.04
PTBP1-221ENST00000635647 MCOLN2Q8IZK6 566 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 HELQQ8TDG4 1101 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 ART4Q93070 314 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 FBXO40Q9UH90 709 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 GNAT1P11488 350 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 ARHGEF18Q6ZSZ5 1173 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 TRIM50Q86XT4 487 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 RHOT1Q8IXI2 618 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 MCEEQ96PE7 176 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 TRAIPQ9BWF2 469 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 MOV10L1Q9BXT6 1211 aaKnown RBP15.29■□□□□ 0.04
PTBP1-221ENST00000635647 GINM1Q9NU53 330 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 C15orf41Q9Y2V0 281 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 TTLL3Q9Y4R7 772 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 RIPK3Q9Y572 518 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 MAD1L1Q9Y6D9 718 aa15.29■□□□□ 0.04
PTBP1-221ENST00000635647 EGFRP00533 1210 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 ETS1P14921 441 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 ARSEP51690 589 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 BPIFB4P59827 614 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 NFIL3Q16649 462 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 SPATA21Q7Z572 469 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 RFX6Q8HWS3 928 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 EPB41L4BQ9H329 900 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 PCDHB2Q9Y5E7 798 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 H7C0C1 242 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 STAM2O75886 525 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 TTC4O95801 387 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 CFHP08603 1231 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 ZBTB48P10074 688 aaPredicted RBP15.28■□□□□ 0.04
PTBP1-221ENST00000635647 MUTP22033 750 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 RXRBP28702 533 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 ATP5OP48047 213 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 DRG2P55039 364 aaKnown RBP15.28■□□□□ 0.04
PTBP1-221ENST00000635647 NOP14P78316 857 aaKnown RBP15.28■□□□□ 0.04
PTBP1-221ENST00000635647 DNAJC3Q13217 504 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 PCNX4Q63HM2 1172 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 RNF149Q8NC42 400 aa15.28■□□□□ 0.04
PTBP1-221ENST00000635647 CCT6BQ92526 530 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms