RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 NME8Q8N427 588 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 RASGEF1CQ8N431 466 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 MS4A14Q96JA4 679 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 VCPIP1Q96JH7 1222 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 CCDC94Q9BW85 323 aaPredicted RBP15.2■□□□□ 0.02
LIMS4-204ENST00000632897 GOLPH3Q9H4A6 298 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 FAM124BQ9H5Z6 455 aaPredicted RBP15.2■□□□□ 0.02
LIMS4-204ENST00000632897 VRTNQ9H8Y1 702 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 PLEKHA5Q9HAU0 1116 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 ZNF446Q9NWS9 450 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 SRRDQ9UH36 339 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 SIX4Q9UIU6 781 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 TTC7AQ9ULT0 858 aaPredicted RBP15.2■□□□□ 0.02
LIMS4-204ENST00000632897 DERAQ9Y315 318 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 C17orf102A2RUQ5 167 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 PGRMC1O00264 195 aaKnown RBP15.2■□□□□ 0.02
LIMS4-204ENST00000632897 STAU1O95793 577 aaKnown RBP15.2■□□□□ 0.02
LIMS4-204ENST00000632897 CYBAP13498 195 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 ASPAP45381 313 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 NSFP46459 744 aaKnown RBP15.2■□□□□ 0.02
LIMS4-204ENST00000632897 PURAQ00577 322 aaKnown RBP15.2■□□□□ 0.02
LIMS4-204ENST00000632897 TMEM132DQ14C87 1099 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 SLC10A6Q3KNW5 377 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 ZNF667Q5HYK9 610 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 NOTUMQ6P988 496 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 SLC27A1Q6PCB7 646 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 RUFY4Q6ZNE9 571 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 CATSPER4Q7RTX7 472 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 MCOLN2Q8IZK6 566 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 C1orf127Q8N9H9 656 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 USP38Q8NB14 1042 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 ZNF564Q8TBZ8 553 aaPredicted RBP15.2■□□□□ 0.02
LIMS4-204ENST00000632897 NUP85Q9BW27 656 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 UPF3AQ9H1J1 476 aaKnown RBP15.2■□□□□ 0.02
LIMS4-204ENST00000632897 CARD9Q9H257 536 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 CISHQ9NSE2 258 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 CNOT8Q9UFF9 292 aaKnown RBP15.2■□□□□ 0.02
LIMS4-204ENST00000632897 ITGA11Q9UKX5 1188 aa15.2■□□□□ 0.02
LIMS4-204ENST00000632897 RALGAPA2Q2PPJ7 1873 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 DDX3YO15523 660 aaKnown RBP15.19■□□□□ 0.02
LIMS4-204ENST00000632897 MEFVO15553 781 aaPredicted RBP15.19■□□□□ 0.02
LIMS4-204ENST00000632897 THAP12O43422 761 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 CEP104O60308 925 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 LSM8O95777 96 aaKnown RBP15.19■□□□□ 0.02
LIMS4-204ENST00000632897 P4HA1P13674 534 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 CAPN2P17655 700 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 GJA9P57773 515 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 VSNL1P62760 191 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 TNNC1P63316 161 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 NOMO3P69849 1222 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 NKX3-2P78367 333 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 BEX3Q00994 111 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 MAP9Q49MG5 647 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 LIN9Q5TKA1 542 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 NAA35Q5VZE5 725 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 PHF13Q86YI8 300 aaPredicted RBP15.19■□□□□ 0.02
LIMS4-204ENST00000632897 UBL4BQ8N7F7 174 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 TRPV1Q8NER1 839 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.19■□□□□ 0.02
LIMS4-204ENST00000632897 BCO2Q9BYV7 579 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 ARHGAP39Q9C0H5 1083 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 CYP3A43Q9HB55 503 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 EHD2Q9NZN4 543 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 TMEM59LQ9UK28 342 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 ALG6Q9Y672 507 aa15.19■□□□□ 0.02
LIMS4-204ENST00000632897 NPTXRO95502 500 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 KRT19P08727 400 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 EIF4BP23588 611 aaKnown RBP15.18■□□□□ 0.02
LIMS4-204ENST00000632897 HOXA11P31270 313 aaPredicted RBP15.18■□□□□ 0.02
LIMS4-204ENST00000632897 GRK4P32298 578 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 RBP5P82980 135 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 C1QBPQ07021 282 aaKnown RBP15.18■□□□□ 0.02
LIMS4-204ENST00000632897 TAF2Q6P1X5 1199 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 MON1BQ7L1V2 547 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 TTC39CQ8N584 583 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 C7orf31Q8N865 590 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 CXorf38Q8TB03 319 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 TSPAN18Q96SJ8 248 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 NAP1L3Q99457 506 aaPredicted RBP15.18■□□□□ 0.02
LIMS4-204ENST00000632897 OSMRQ99650 979 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 MTG1Q9BT17 334 aaPredicted RBP15.18■□□□□ 0.02
LIMS4-204ENST00000632897 ZNF518BQ9C0D4 1074 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 WNT8AQ9H1J5 351 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 SPC25Q9HBM1 224 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 RBM12Q9NTZ6 932 aaKnown RBP15.18■□□□□ 0.02
LIMS4-204ENST00000632897 SMARCAL1Q9NZC9 954 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 PCDH10Q9P2E7 1040 aa15.18■□□□□ 0.02
LIMS4-204ENST00000632897 CCDC188H7C350 402 aa15.17■□□□□ 0.02
LIMS4-204ENST00000632897 TREHO43280 583 aa15.17■□□□□ 0.02
LIMS4-204ENST00000632897 ATMINO43313 823 aaPredicted RBP15.17■□□□□ 0.02
LIMS4-204ENST00000632897 CALCAP01258 141 aa15.17■□□□□ 0.02
LIMS4-204ENST00000632897 PAEPP09466 180 aa15.17■□□□□ 0.02
LIMS4-204ENST00000632897 EN2P19622 333 aaPredicted RBP15.17■□□□□ 0.02
LIMS4-204ENST00000632897 CTNNA2P26232 953 aa15.17■□□□□ 0.02
LIMS4-204ENST00000632897 CRYBB1P53674 252 aaPredicted RBP15.17■□□□□ 0.02
LIMS4-204ENST00000632897 CAP1Q01518 475 aa15.17■□□□□ 0.02
LIMS4-204ENST00000632897 HIC1Q14526 733 aa15.17■□□□□ 0.02
LIMS4-204ENST00000632897 SCARA3Q6AZY7 606 aa15.17■□□□□ 0.02
LIMS4-204ENST00000632897 SLAIN1Q8ND83 568 aa15.17■□□□□ 0.02
LIMS4-204ENST00000632897 SH3TC2Q8TF17 1288 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms