RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 SLC18A3Q16572 532 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 METTL23Q86XA0 190 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 NPAS4Q8IUM7 802 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 FAM71AQ8IYT1 594 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 TMEM86AQ8N2M4 240 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 C1orf127Q8N9H9 656 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 RNF169Q8NCN4 708 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 HELQQ8TDG4 1101 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 SEMA4DQ92854 862 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 ZNF830Q96NB3 372 aaPredicted RBP10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 MMS19Q96T76 1030 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 MYO1AQ9UBC5 1043 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 NXF1Q9UBU9 619 aaKnown RBP10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 STK39Q9UEW8 545 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 INTUQ9ULD6 942 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 NUB1Q9Y5A7 615 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 ANK1P16157 1881 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 TANC1Q9C0D5 1861 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 ARL5CA6NH57 179 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 KPNA7A9QM74 516 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 C9IYK1 514 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 KIAA0355O15063 1070 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 EPHB6O15197 1021 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 INPPL1O15357 1258 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 ZNF500O60304 480 aaPredicted RBP10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 LRRN2O75325 713 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 VNN1O95497 513 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 TIMP1P01033 207 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 AMHP03971 560 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 EIF4A3P38919 411 aaKnown RBP10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 MLH1P40692 756 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 SLC8A3P57103 927 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 FAM189BP81408 668 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 PPIGQ13427 754 aaKnown RBP eCLIP10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 PTPN14Q15678 1187 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 PTPN21Q16825 1174 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 DNTTIP2Q5QJE6 756 aaKnown RBP10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 C9orf57Q5W0N0 161 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 ZNF662Q6ZS27 426 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 UNC93AQ86WB7 457 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 TMEM192Q8IY95 271 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 TOP6BLQ8N6T0 577 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 APPL2Q8NEU8 664 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 DBF4BQ8NFT6 615 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 TNIP3Q96KP6 325 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 NOX5Q96PH1 765 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 PPP1R12CQ9BZL4 782 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 ZNF518BQ9C0D4 1074 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 SNX25Q9H3E2 840 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 KCNF1Q9H3M0 494 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 PRDM5Q9NQX1 630 aaPredicted RBP10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 SEPT11Q9NVA2 429 aaKnown RBP10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 LCMT1Q9UIC8 334 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 TBX21Q9UL17 535 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 HES2Q9Y543 173 aa10.85□□□□□ -0.67
FOXCUT-201ENST00000628509 ANO9A1A5B4 782 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 SOWAHDA6NJG2 315 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 FOXN3O00409 490 aaPredicted RBP10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 KIF5CO60282 957 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 LCA5LO95447 670 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 CST3P01034 146 aaPredicted RBP10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 GZMAP12544 262 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 DESP17661 470 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 GNA15P30679 374 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 LHX1P48742 406 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 CDR2Q01850 454 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 ELAVL2Q12926 359 aaKnown RBP10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 NOMO2Q5JPE7 1267 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 MFSD5Q6N075 450 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 WDR59Q6PJI9 974 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 TRAF7Q6Q0C0 670 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 TMEM270Q6UE05 265 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 IRF2BP2Q7Z5L9 587 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 TMEM139Q8IV31 216 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 ARHGEF19Q8IW93 802 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 CCAR2Q8N163 923 aaKnown RBP10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 ALS2CR12Q96Q35 445 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 PPP1R10Q96QC0 940 aaKnown RBP10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 GAD1Q99259 594 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 AGPAT1Q99943 283 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 PI4K2AQ9BTU6 479 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 NT5C1AQ9BXI3 368 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 OXCT2Q9BYC2 517 aaPredicted RBP10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 BCO2Q9BYV7 579 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 GDAP2Q9NXN4 497 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 KLK14Q9P0G3 267 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 CNTN6Q9UQ52 1028 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 PPP2R2CQ9Y2T4 447 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 PDCD11Q14690 1871 aaKnown RBP10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 PTPRJQ12913 1337 aa10.84□□□□□ -0.67
FOXCUT-201ENST00000628509 RBAK-RBAKDNI3L0D1 243 aa10.83□□□□□ -0.68
FOXCUT-201ENST00000628509 PIRO00625 290 aa10.83□□□□□ -0.68
FOXCUT-201ENST00000628509 ENPP3O14638 875 aa10.83□□□□□ -0.68
FOXCUT-201ENST00000628509 NBNO60934 754 aa10.83□□□□□ -0.68
FOXCUT-201ENST00000628509 TACC1O75410 805 aa10.83□□□□□ -0.68
FOXCUT-201ENST00000628509 LSM8O95777 96 aaKnown RBP10.83□□□□□ -0.68
FOXCUT-201ENST00000628509 MYBL1P10243 752 aa10.83□□□□□ -0.68
FOXCUT-201ENST00000628509 ODC1P11926 461 aa10.83□□□□□ -0.68
FOXCUT-201ENST00000628509 CYP11B1P15538 503 aa10.83□□□□□ -0.68
FOXCUT-201ENST00000628509 MAGEA1P43355 309 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms