RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 WDR44Q5JSH3 913 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 HABP4Q5JVS0 413 aaKnown RBP13.4□□□□□ -0.26
LINC00963-216ENST00000623185 SMYD5Q6GMV2 418 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 PDE12Q6L8Q7 609 aaKnown RBP13.4□□□□□ -0.26
LINC00963-216ENST00000623185 FUT10Q6P4F1 479 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 GBP6Q6ZN66 633 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 LIMS2Q7Z4I7 341 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 TMEM173Q86WV6 379 aaPredicted RBP13.4□□□□□ -0.26
LINC00963-216ENST00000623185 TMEM130Q8N3G9 435 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 FBXO22Q8NEZ5 403 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 SEMA4DQ92854 862 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 FAM84AQ96KN4 292 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 SENP8Q96LD8 212 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 IMPG2Q9BZV3 1241 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 RBSNQ9H1K0 784 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 VPS16Q9H269 839 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 MMRN2Q9H8L6 949 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 SSX2IPQ9Y2D8 614 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 PTPRSQ13332 1948 aa13.4□□□□□ -0.26
LINC00963-216ENST00000623185 SF3B1O75533 1304 aaKnown RBP eCLIP13.39□□□□□ -0.278e-6■■■■■ 107
LINC00963-216ENST00000623185 CITO14578 2027 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 F8W810 466 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 CYB561D2O14569 222 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 SOD2P04179 222 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 CYP11A1P05108 521 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 P4HA1P13674 534 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 TYMPP19971 482 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 FGFR3P22607 806 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 BRCC3P46736 316 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 MYL7Q01449 175 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 GPM6BQ13491 265 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 MRPL58Q14197 206 aaKnown RBP13.39□□□□□ -0.27
LINC00963-216ENST00000623185 NR1I3Q14994 352 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 UVSSAQ2YD98 709 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 ZNF667Q5HYK9 610 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 TOP6BLQ8N6T0 577 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 RNF214Q8ND24 703 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 APPL2Q8NEU8 664 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 SPATA18Q8TC71 538 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 BCL7CQ8WUZ0 217 aaPredicted RBP13.39□□□□□ -0.27
LINC00963-216ENST00000623185 OXCT2Q9BYC2 517 aaPredicted RBP13.39□□□□□ -0.27
LINC00963-216ENST00000623185 LMAN2LQ9H0V9 348 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 FAM124BQ9H5Z6 455 aaPredicted RBP13.39□□□□□ -0.27
LINC00963-216ENST00000623185 RTN4Q9NQC3 1192 aaKnown RBP13.39□□□□□ -0.27
LINC00963-216ENST00000623185 TAB2Q9NYJ8 693 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 DSEQ9UL01 958 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 PCDHB8Q9UN66 801 aa13.39□□□□□ -0.27
LINC00963-216ENST00000623185 A0A1B0GTH6 734 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 SOX1O00570 391 aaPredicted RBP13.38□□□□□ -0.27
LINC00963-216ENST00000623185 HUS1O60921 280 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 OAZ2O95190 189 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 SERPINC1P01008 464 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 PON1P27169 355 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 PIK3CAP42336 1068 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 FANCCQ00597 558 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 KCNMA1Q12791 1236 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 EXOC3L4Q17RC7 722 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 ZNF699Q32M78 642 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 FKBP15Q5T1M5 1219 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 FAM171A1Q5VUB5 890 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 KIAA0319Q5VV43 1072 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 PDXDC1Q6P996 788 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.38□□□□□ -0.27
LINC00963-216ENST00000623185 TAS1R1Q7RTX1 841 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 SPRED2Q7Z698 418 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 VPS52Q8N1B4 723 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 TMEM86AQ8N2M4 240 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 HASPINQ8TF76 798 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 POF1BQ8WVV4 589 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 ARNTL2Q8WYA1 636 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 FAM81BQ96LP2 452 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 NAP1L5Q96NT1 182 aaPredicted RBP13.38□□□□□ -0.27
LINC00963-216ENST00000623185 TTPALQ9BTX7 342 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 CYP3A43Q9HB55 503 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 ALG13Q9NP73 1137 aaKnown RBP13.38□□□□□ -0.27
LINC00963-216ENST00000623185 NGRNQ9NPE2 291 aaKnown RBP13.38□□□□□ -0.27
LINC00963-216ENST00000623185 LMCD1Q9NZU5 365 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 MTUS1Q9ULD2 1270 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 SNX9Q9Y5X1 595 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 IRAK3Q9Y616 596 aa13.38□□□□□ -0.27
LINC00963-216ENST00000623185 LGALS16A8MUM7 142 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 PES1O00541 588 aaKnown RBP13.37□□□□□ -0.27
LINC00963-216ENST00000623185 GABRDO14764 452 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 GRM6O15303 877 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 LILRB3O75022 631 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 LRRN2O75325 713 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 TACC1O75410 805 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 CTSAP10619 480 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 ODC1P11926 461 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 SLC9A1P19634 815 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 LHX1P48742 406 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 UBASH3AP57075 661 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 TNNC1P63316 161 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 DSG1Q02413 1049 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 UBXN1Q04323 297 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 CAMK1Q14012 370 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 SOWAHAQ2M3V2 549 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 KIAA1841Q6NSI8 718 aa13.37□□□□□ -0.27
LINC00963-216ENST00000623185 ANKS3Q6ZW76 656 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms