RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 VEGFBP49765 207 aa13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 BPIFB4P59827 614 aa13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 KCNA10Q16322 511 aa13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 KCTD19Q17RG1 926 aaPredicted RBP13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 BEND6Q5SZJ8 279 aaPredicted RBP13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 MAP3K21Q5TCX8 1036 aa13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 CCDC181Q5TID7 509 aa13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 GDF6Q6KF10 455 aaPredicted RBP13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 DAAM2Q86T65 1068 aa13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 KIF12Q96FN5 646 aa13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 XYLT2Q9H1B5 865 aa13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 ISCUQ9H1K1 167 aa13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 GTF2IRD1Q9UHL9 959 aa13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 SIX4Q9UIU6 781 aa13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 POLIQ9UNA4 740 aa13.59□□□□□ -0.23
TNFAIP3-209ENST00000619035 CTSHP09668 335 aa13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 TCP1P17987 556 aaKnown RBP13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 SLC7A5Q01650 507 aa13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 WDR72Q3MJ13 1102 aa13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 MEI1Q5TIA1 1274 aa13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 SESTD1Q86VW0 696 aa13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 PASD1Q8IV76 773 aa13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 PCSK9Q8NBP7 692 aaKnown RBP13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 SPATA4Q8NEY3 305 aa13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 GDAP1L1Q96MZ0 367 aa13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 NXF3Q9H4D5 531 aaKnown RBP13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 CISHQ9NSE2 258 aa13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 RNF19AQ9NV58 838 aa13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 CTTNBP2NLQ9P2B4 639 aa13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 NCANO14594 1321 aa13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 BRCA2P51587 3418 aa13.58□□□□□ -0.24
TNFAIP3-209ENST00000619035 M0QZ92 97 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 THAP12O43422 761 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 PRLRP16471 622 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 ASPAP45381 313 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 RAP1GAPP47736 663 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 CRYBB1P53674 252 aaPredicted RBP13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 YARSP54577 528 aaKnown RBP13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 NT5DC4Q86YG4 428 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 CD302Q8IX05 232 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 KLHDC9Q8NEP7 349 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 FAXDC2Q96IV6 333 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 LRRC1Q9BTT6 524 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 CXCL16Q9H2A7 254 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 CABYRO75952 493 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 MYBL2P10244 700 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 GZMAP12544 262 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 AKAP5P24588 427 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 POLR2BP30876 1174 aaKnown RBP13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 GPC5P78333 572 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 CLEC16AQ2KHT3 1053 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 ZNF667Q5HYK9 610 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 LRRC57Q8N9N7 239 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 CPA5Q8WXQ8 436 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 ZNF653Q96CK0 615 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 CELF4Q9BZC1 486 aaKnown RBP13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 RBM12Q9NTZ6 932 aaKnown RBP13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 TSKSQ9UJT2 592 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 COG5Q9UP83 839 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 AGAP1Q9UPQ3 857 aa13.57□□□□□ -0.24
TNFAIP3-209ENST00000619035 BUB1BO60566 1050 aaPredicted RBP13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 CFHP08603 1231 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 MRPS6P82932 125 aaKnown RBP13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 GLRA4Q5JXX5 417 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 NAA35Q5VZE5 725 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 PEX26Q7Z412 305 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 RPAINQ86UA6 219 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 RSPH3Q86UC2 560 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 ZNF677Q86XU0 584 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 WNT8BQ93098 351 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 DPP3Q9NY33 737 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 CDY2AQ9Y6F7 541 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 KCNK3O14649 394 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 FKTNO75072 461 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 RPS6KA1Q15418 735 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 ACAD10Q6JQN1 1059 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 RHOT2Q8IXI1 618 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 TAF4BQ92750 862 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 CYFIP2Q96F07 1278 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 DMGDHQ9UI17 866 aaKnown RBP13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 C2CD2Q9Y426 696 aa13.56□□□□□ -0.24
TNFAIP3-209ENST00000619035 TMEM110-MUSTN1A8MSY1 372 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 RECQL4O94761 1208 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 CDH8P55286 799 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 TUBB4BP68371 445 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 C2CD6Q53TS8 623 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 TWF2Q6IBS0 349 aaKnown RBP13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 CCSAPQ6IQ19 270 aaPredicted RBP13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 PHLDB2Q86SQ0 1253 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 SYCE1Q8N0S2 351 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 UBR7Q8N806 425 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 SLAIN1Q8ND83 568 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 HPDLQ96IR7 371 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 RPGRIP1Q96KN7 1286 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 SNX27Q96L92 541 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 TSPAN18Q96SJ8 248 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 SMYD3Q9H7B4 428 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 PLEKHA5Q9HAU0 1116 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 KLK14Q9P0G3 267 aa13.55□□□□□ -0.24
TNFAIP3-209ENST00000619035 PARP2Q9UGN5 583 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms