RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 SPIRE2Q8WWL2 714 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 TTC17Q96AE7 1141 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 SPATA17Q96L03 361 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 CAPS2Q9BXY5 557 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 C17orf75Q9HAS0 396 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 MARF1Q9Y4F3 1742 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 SCAMP3O14828 347 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 GAS2O43903 313 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 ITGB5P18084 799 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 ETFBP38117 255 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 ARL4CP56559 192 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 PCSK7Q16549 785 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 Q4G0T1 1027 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 KCNT1Q5JUK3 1230 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 GPR142Q7Z601 462 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 GAD1Q99259 594 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 TRIM56Q9BRZ2 755 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 METTL5Q9NRN9 209 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 BFARQ9NZS9 450 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 KCNN4O15554 427 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 PSEN2P49810 448 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 CLCN6P51797 869 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 CDH8P55286 799 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 ROR1Q01973 937 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 CUL2Q13617 745 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 CTXN3Q4LDR2 81 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 SRRM1Q8IYB3 904 aaKnown RBP10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 EMC1Q8N766 993 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 SOCS4Q8WXH5 440 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 VTA1Q9NP79 307 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 LSM7Q9UK45 103 aaKnown RBP10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 MYPNQ86TC9 1320 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 SGPL1O95470 568 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 ARSEP51690 589 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 GYS2P54840 703 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 BTG3Q14201 252 aaPredicted RBP10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 JADE1Q6IE81 842 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 TTI2Q6NXR4 508 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 ZBED8Q8IZ13 594 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 CACNA2D3Q8IZS8 1091 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 RNF10Q8N5U6 811 aaKnown RBP10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 DEFB118Q96PH6 123 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 PORCNQ9H237 461 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 ENTPD7Q9NQZ7 604 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 HPSEQ9Y251 543 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 FARP1Q9Y4F1 1045 aaPredicted RBP10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 KRT14P02533 472 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 CYBBP04839 570 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 COMTP21964 271 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 EPHB2P29323 1055 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 RAD51Q06609 339 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 PDIA2Q13087 525 aaKnown RBP10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 E4F1Q66K89 784 aaPredicted RBP10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 TAS2R42Q7RTR8 314 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 RIOX2Q8IUF8 465 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 KIAA0895Q8NCT3 520 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 CYFIP2Q96F07 1278 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 RANBP17Q9H2T7 1088 aaKnown RBP10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 SMPD4Q9NXE4 827 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 SH3BP1Q9Y3L3 701 aa10.69□□□□□ -0.7
SMARCA1-205ENST00000617310 CCDC151A5D8V7 595 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 BTBD19C9JJ37 291 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 SLC26A2P50443 739 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 TWF1Q12792 350 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 CASP8Q14790 479 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 PTGISQ16647 500 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 FBXO38Q6PIJ6 1188 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 ANKMY2Q8IV38 441 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 KIAA0319LQ8IZA0 1049 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 ATP11CQ8NB49 1132 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 UPF1Q92900 1129 aaKnown RBP eCLIP10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 MKL1Q969V6 931 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 ADAM2Q99965 735 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 TACO1Q9BSH4 297 aaKnown RBP10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 MRIQ9BWK5 157 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 MUC3BQ9H195 1237 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 BAIAP2L1Q9UHR4 511 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 LRG1P02750 347 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 COG7P83436 770 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 MMEL1Q495T6 779 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 FAM47EQ6ZV65 393 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 NDUFAF2Q8N183 169 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 TATDN2Q93075 761 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 WDR18Q9BV38 432 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 COLEC11Q9BWP8 271 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 RAB6BQ9NRW1 208 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 GPATCH2LQ9NWQ4 482 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 XRN1Q8IZH2 1706 aaKnown RBP10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 TXNDC9O14530 226 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 MMEP08473 750 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 ATICP31939 592 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 NNTQ13423 1086 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 FAXCQ5TGI0 409 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 IZUMO3Q5VZ72 239 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 FAM131BQ86XD5 332 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 LENG1Q96BZ8 264 aaPredicted RBP10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 WNK4Q96J92 1243 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 MED15Q96RN5 788 aa10.68□□□□□ -0.7
SMARCA1-205ENST00000617310 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.68□□□□□ -0.78e-8■□□□□ 10.9
SMARCA1-205ENST00000617310 TRIM51Q9BSJ1 452 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms