RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 GAS8O95995 478 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 EDN1P05305 212 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 CYP2C8P10632 490 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 UBA1P22314 1058 aaKnown RBP12.71□□□□□ -0.37
TUBD1-216ENST00000613721 PTK6Q13882 451 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 TRMT10CQ7L0Y3 403 aaKnown RBP12.71□□□□□ -0.37
TUBD1-216ENST00000613721 PACS2Q86VP3 889 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 CCDC50Q8IVM0 306 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.71□□□□□ -0.37
TUBD1-216ENST00000613721 UHMK1Q8TAS1 419 aaKnown RBP12.71□□□□□ -0.37
TUBD1-216ENST00000613721 ATG4AQ8WYN0 398 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 SNF8Q96H20 258 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 VCPIP1Q96JH7 1222 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 SELENOSQ9BQE4 189 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 STMN4Q9H169 189 aaPredicted RBP12.71□□□□□ -0.37
TUBD1-216ENST00000613721 TMEM134Q9H6X4 195 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 SCINQ9Y6U3 715 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 ADGRA2Q96PE1 1338 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 THAP12O43422 761 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 CFHP08603 1231 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 HARSP12081 509 aaKnown RBP12.71□□□□□ -0.37
TUBD1-216ENST00000613721 MMP13P45452 471 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 MKRN4PQ13434 485 aaPredicted RBP12.71□□□□□ -0.37
TUBD1-216ENST00000613721 CAPSQ13938 189 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 WDR78Q5VTH9 848 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 DAB2IPQ5VWQ8 1189 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 PPP1R2P3Q6NXS1 205 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 ERO1BQ86YB8 467 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 RHOT1Q8IXI2 618 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 ANKRD13AQ8IZ07 590 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 OR5B17Q8NGF7 314 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 MDM1Q8TC05 714 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 EPS8L3Q8TE67 593 aaKnown RBP12.71□□□□□ -0.37
TUBD1-216ENST00000613721 CENPTQ96BT3 561 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 L3MBTL3Q96JM7 780 aaPredicted RBP12.71□□□□□ -0.37
TUBD1-216ENST00000613721 XPO6Q96QU8 1125 aaKnown RBP12.71□□□□□ -0.37
TUBD1-216ENST00000613721 HERPUD2Q9BSE4 406 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 IMPG2Q9BZV3 1241 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 DCLK3Q9C098 648 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 CDC42EP4Q9H3Q1 356 aaKnown RBP12.71□□□□□ -0.37
TUBD1-216ENST00000613721 TMEM51Q9NW97 253 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 NUB1Q9Y5A7 615 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 CNTNAP2Q9UHC6 1331 aa12.71□□□□□ -0.37
TUBD1-216ENST00000613721 C5orf60A6NFR6 353 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 GLTPD2A6NH11 291 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 SPDYE5A6NIY4 337 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 SOCS7O14512 581 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 RASGRF2O14827 1237 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 FARP2O94887 1054 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-216ENST00000613721 CHN1P15882 459 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 ITIH2P19823 946 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 NCOA4Q13772 614 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 ERMARDQ5T6L9 678 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 MMS22LQ6ZRQ5 1243 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 USP50Q70EL3 339 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-216ENST00000613721 PHF13Q86YI8 300 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-216ENST00000613721 CCDC114Q96M63 670 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 NRBP2Q9NSY0 501 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 DDX20Q9UHI6 824 aaKnown RBP12.7□□□□□ -0.38
TUBD1-216ENST00000613721 CNTN6Q9UQ52 1028 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 MCM3APO60318 1980 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 LRRC37A2A6NM11 1700 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 GSTTP1A0A1W2PQM5 241 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 TP73O15350 636 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 ADCY3O60266 1144 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 RALAP11233 206 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 SSTR3P32745 418 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-216ENST00000613721 SLCO1A2P46721 670 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 IFI35P80217 286 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-216ENST00000613721 IFT88Q13099 833 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 KLF1Q13351 362 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-216ENST00000613721 MAMLD1Q13495 774 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 TARBP2Q15633 366 aaKnown RBP12.7□□□□□ -0.38
TUBD1-216ENST00000613721 QPCTQ16769 361 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 SEZ6Q53EL9 994 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 FAM160B1Q5W0V3 765 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 PLEKHA7Q6IQ23 1121 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 RHBDF2Q6PJF5 856 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 C6orf89Q6UWU4 347 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.7□□□□□ -0.38
TUBD1-216ENST00000613721 KATNAL2Q8IYT4 538 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 PCYT2Q99447 389 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 ROPN1BQ9BZX4 212 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-216ENST00000613721 ROPN1Q9HAT0 212 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-216ENST00000613721 HOMER3Q9NSC5 361 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 RBPJLQ9UBG7 517 aa12.7□□□□□ -0.38
TUBD1-216ENST00000613721 O00370 1275 aa12.69□□□□□ -0.38
TUBD1-216ENST00000613721 TLR3O15455 904 aaKnown RBP12.69□□□□□ -0.38
TUBD1-216ENST00000613721 ATF2P15336 505 aa12.69□□□□□ -0.38
TUBD1-216ENST00000613721 STAT5BP51692 787 aa12.69□□□□□ -0.38
TUBD1-216ENST00000613721 TAS2R40P59535 323 aa12.69□□□□□ -0.38
TUBD1-216ENST00000613721 CAV1Q03135 178 aa12.69□□□□□ -0.38
TUBD1-216ENST00000613721 AUHQ13825 339 aaKnown RBP12.69□□□□□ -0.38
TUBD1-216ENST00000613721 ZNF568Q3ZCX4 644 aa12.69□□□□□ -0.38
TUBD1-216ENST00000613721 RNF187Q5TA31 235 aaPredicted RBP12.69□□□□□ -0.38
TUBD1-216ENST00000613721 GPAT2Q6NUI2 795 aa12.69□□□□□ -0.38
TUBD1-216ENST00000613721 ZPBP2Q6X784 338 aa12.69□□□□□ -0.38
TUBD1-216ENST00000613721 CPLX4Q7Z7G2 160 aa12.69□□□□□ -0.38
TUBD1-216ENST00000613721 BRSK2Q8IWQ3 736 aa12.69□□□□□ -0.38
TUBD1-216ENST00000613721 ATL2Q8NHH9 583 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms