RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 WDR11Q9BZH6 1224 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 IFT122Q9HBG6 1241 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 TRPC6Q9Y210 931 aa11.37□□□□□ -0.59
PCDHGC3-202ENST00000611950 GOLGA6L10A0A0M3HER8 536 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 GTPBP10A4D1E9 387 aaKnown RBP11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 SLC16A4O15374 487 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 TMEM253P0C7T8 217 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 PYGMP11217 842 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 HOXD12P35452 270 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 ZNF131P52739 623 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 PMS2P54278 862 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 SH3BGRP55822 239 aaPredicted RBP11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 PPATQ06203 517 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 MAP7D1Q3KQU3 841 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 LMBRD2Q68DH5 695 aaPredicted RBP11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 SAMD14Q8IZD0 417 aaPredicted RBP11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 PLEKHO2Q8TD55 490 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 ATG4AQ8WYN0 398 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 HVCN1Q96D96 273 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 PCDHB18PQ96TA0 734 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 TCHPQ9BT92 498 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 SLITRK6Q9H5Y7 841 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 GMEB1Q9Y692 573 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 KDM1AO60341 852 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 CREB1P16220 341 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 ENDOUP21128 410 aaKnown RBP11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 PTENP60484 403 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 DENND2CQ68D51 928 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 PLA2G4FQ68DD2 849 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 CCDC137Q6PK04 289 aaKnown RBP11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 PADI6Q6TGC4 694 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 PAGR1Q9BTK6 254 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 PI4K2AQ9BTU6 479 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 ADAM33Q9BZ11 813 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 ZNF304Q9HCX3 659 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 TMED5Q9Y3A6 229 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 RASSF9O75901 435 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 EGFRP00533 1210 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 CYP1A2P05177 515 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 VIMP08670 466 aaKnown RBP11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 CCT8P50990 548 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 PSMD7P51665 324 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 NPEPPSP55786 919 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 LONRF1Q17RB8 773 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 B3GNT9Q6UX72 402 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 LRIG3Q6UXM1 1119 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 PRUNE1Q86TP1 453 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 CACNA2D3Q8IZS8 1091 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 PRELID2Q8N945 189 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 PRMT1Q99873 361 aaKnown RBP11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 DDX23Q9BUQ8 820 aaKnown RBP11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 RAB17Q9H0T7 212 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 EPB41L4BQ9H329 900 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 SLC40A1Q9NP59 571 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 FAM114A2Q9NRY5 505 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 CTNNAL1Q9UBT7 734 aa11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 ZNF70Q9UC06 446 aaPredicted RBP11.36□□□□□ -0.59
PCDHGC3-202ENST00000611950 SMTNP53814 917 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 PEX3P56589 373 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 MAPK7Q13164 816 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 MTMR3Q13615 1198 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 BYSLQ13895 437 aaKnown RBP11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 CNGA3Q16281 694 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 NFIL3Q16649 462 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 FAM133BQ5BKY9 247 aaKnown RBP11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 ZDHHC24Q6UX98 284 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 NOP9Q86U38 636 aaKnown RBP11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 LCA5Q86VQ0 697 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 BPHLQ86WA6 291 aaPredicted RBP11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 CBWD2Q8IUF1 395 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 PREBQ9HCU5 417 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 DMAC2Q9NW81 257 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 TBK1Q9UHD2 729 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 CCDC169A6NNP5 214 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 ADM5C9JUS6 153 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 NFIBO00712 420 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 CES2O00748 559 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 KIAA0391O15091 583 aaKnown RBP11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 RGS16O15492 202 aaPredicted RBP11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 CLDN3O15551 220 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 PDGFRBP09619 1106 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 ITGB5P18084 799 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 VAMP7P51809 220 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 NUGGCQ68CJ6 796 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 DUPD1Q68J44 220 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 RGMBQ6NW40 437 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 MIER3Q7Z3K6 550 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 C2orf69Q8N8R5 385 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 ANKRD42Q8N9B4 389 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 DCPSQ96C86 337 aaKnown RBP11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 CEP295NLQ96MC4 621 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 NACC1Q96RE7 527 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 ELAC2Q9BQ52 826 aaKnown RBP11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 SYT11Q9BT88 431 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 TMEM39BQ9GZU3 492 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 VCPKMTQ9H867 229 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 GBA2Q9HCG7 927 aaPredicted RBP11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 ZDHHC18Q9NUE0 388 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 TMOD2Q9NZR1 351 aa11.35□□□□□ -0.59
PCDHGC3-202ENST00000611950 TTLL3Q9Y4R7 772 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms