RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 GOLGA8RI6L899 631 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 ZBED1O96006 694 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 CPP00450 1065 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 PRKCBP05771 671 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 AP3M2P53677 418 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 FMO1Q01740 532 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 SLC20A2Q08357 652 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 SMTNL2Q2TAL5 461 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 CCDC14Q49A88 953 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 SLFN11Q7Z7L1 901 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 ZC3H18Q86VM9 953 aaKnown RBP9.18□□□□□ -0.94
LIG4-204ENST00000611712 SIAH1Q8IUQ4 282 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 KIF2BQ8N4N8 673 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 ATP11CQ8NB49 1132 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 ATP2A3Q93084 1043 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 GRAMD1AQ96CP6 724 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 PCDHB18PQ96TA0 734 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 APOL6Q9BWW8 343 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 KIAA1683Q9H0B3 1180 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 ZNF408Q9H9D4 720 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 NOP53Q9NZM5 478 aaKnown RBP9.18□□□□□ -0.94
LIG4-204ENST00000611712 COX16Q9P0S2 106 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 MYH15Q9Y2K3 1946 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 IQANK1A0A1B0GTG1 560 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 M0QYV0 167 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 ZBTB7AO95365 584 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 DRG2P55039 364 aaKnown RBP9.18□□□□□ -0.94
LIG4-204ENST00000611712 GCNT1Q02742 428 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 PLCB4Q15147 1175 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 MUM1Q2TAK8 710 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 SYCP2LQ5T4T6 812 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 SESTD1Q86VW0 696 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 TRIM50Q86XT4 487 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 TMEM161BQ8NDZ6 487 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 FAM149B1Q96BN6 582 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 DCPSQ96C86 337 aaKnown RBP9.18□□□□□ -0.94
LIG4-204ENST00000611712 PCYOX1Q9UHG3 505 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 UBIAD1Q9Y5Z9 338 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 CHD4Q14839 1912 aa9.18□□□□□ -0.94
LIG4-204ENST00000611712 ITGB4P16144 1822 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 OATP04181 439 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 NOVP48745 357 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 TAP1Q03518 808 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 TFDP2Q14188 446 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 PIGHQ14442 188 aaPredicted RBP9.17□□□□□ -0.94
LIG4-204ENST00000611712 NFIL3Q16649 462 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 UGCGQ16739 394 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 SGSM1Q2NKQ1 1148 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 FAM102AQ5T9C2 384 aaPredicted RBP9.17□□□□□ -0.94
LIG4-204ENST00000611712 CYP4A22Q5TCH4 519 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 CDR2LQ86X02 465 aaPredicted RBP9.17□□□□□ -0.94
LIG4-204ENST00000611712 SPIRE2Q8WWL2 714 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 ALG13Q9NP73 1137 aaKnown RBP9.17□□□□□ -0.94
LIG4-204ENST00000611712 DMAC2Q9NW81 257 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 CLEC11AQ9Y240 323 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 DCDC2CA8MYV0 355 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 PSTPIP1O43586 416 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 BACE1P56817 501 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 RNASELQ05823 741 aaKnown RBP9.17□□□□□ -0.94
LIG4-204ENST00000611712 RCN2Q14257 317 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 KLHL38Q2WGJ6 581 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 ANKRD20A8PQ5CZ79 823 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 LRRC71Q8N4P6 559 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 NLRP7Q8WX94 980 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 SEPT1Q8WYJ6 367 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 SEMA4DQ92854 862 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 KREMEN1Q96MU8 473 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 FOXP3Q9BZS1 431 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 DCLK3Q9C098 648 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 C2orf40Q9H1Z8 148 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 ASNSD1Q9NWL6 643 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 SEPT10Q9P0V9 454 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 WRAP73Q9P2S5 460 aaPredicted RBP9.17□□□□□ -0.94
LIG4-204ENST00000611712 C19orf81C9J6K1 198 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 H0Y3Z8 333 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 CST8O60676 142 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 FSBPO95073 299 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 GMPSP49915 693 aaPredicted RBP9.17□□□□□ -0.94
LIG4-204ENST00000611712 MMP14P50281 582 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 CDH6P55285 790 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 EIF3EP60228 445 aaKnown RBP9.17□□□□□ -0.94
LIG4-204ENST00000611712 PPATQ06203 517 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 DNAJC3Q13217 504 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 CCNG2Q16589 344 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 TRIM55Q9BYV6 548 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 NIF3L1Q9GZT8 377 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 SLC38A10Q9HBR0 1119 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 SENP1Q9P0U3 644 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 HACL1Q9UJ83 578 aa9.17□□□□□ -0.94
LIG4-204ENST00000611712 PIK3R2O00459 728 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 VWA5AO00534 786 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 GJB6O95452 261 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 SUPT20HL2P0C7V6 817 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 NLRP11P59045 1033 aaKnown RBP9.16□□□□□ -0.94
LIG4-204ENST00000611712 JAG1P78504 1218 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 DGKZQ13574 1117 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 SPDYCQ5MJ68 293 aa9.16□□□□□ -0.94
LIG4-204ENST00000611712 NBPF12Q5TAG4 269 aaPredicted RBP9.16□□□□□ -0.94
LIG4-204ENST00000611712 ANGEL2Q5VTE6 544 aaKnown RBP9.16□□□□□ -0.94
LIG4-204ENST00000611712 ABRAQ8N0Z2 381 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms