RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 UBXN1Q04323 297 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 LRMPQ12912 555 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 SYCP1Q15431 976 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 RAB30Q15771 203 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 EXOC3L4Q17RC7 722 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 SV2CQ496J9 727 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 FILIP1LQ4L180 1135 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 FKBP15Q5T1M5 1219 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 PPP2R2DQ66LE6 453 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 GJB7Q6PEY0 223 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 TRIM65Q6PJ69 517 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 DCLRE1AQ6PJP8 1040 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 SARM1Q6SZW1 724 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 GBP6Q6ZN66 633 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 ARHGEF19Q8IW93 802 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 SLC39A11Q8N1S5 342 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 LMO3Q8TAP4 145 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 DDX27Q96GQ7 796 aaKnown RBP8.26□□□□□ -1.09
MSH6-211ENST00000606499 IGSF21Q96ID5 467 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 B3GALT6Q96L58 329 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 ARID3AQ99856 593 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 VN1R3Q9BXE9 311 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 CERS4Q9HA82 394 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 APOBEC3GQ9HC16 384 aaKnown RBP8.26□□□□□ -1.09
MSH6-211ENST00000606499 SIX2Q9NPC8 291 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 SPG21Q9NZD8 308 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 NXF1Q9UBU9 619 aaKnown RBP8.26□□□□□ -1.09
MSH6-211ENST00000606499 MSRAQ9UJ68 235 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 AJAP1Q9UKB5 411 aaPredicted RBP8.26□□□□□ -1.09
MSH6-211ENST00000606499 POLIQ9UNA4 740 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 SIK3Q9Y2K2 1263 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 R3HCC1Q9Y3T6 440 aaKnown RBP8.26□□□□□ -1.09
MSH6-211ENST00000606499 NUB1Q9Y5A7 615 aa8.26□□□□□ -1.09
MSH6-211ENST00000606499 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.26□□□□□ -1.09
MSH6-211ENST00000606499 SF3B1O75533 1304 aaKnown RBP eCLIP8.26□□□□□ -1.09
MSH6-211ENST00000606499 A0A1W2PPC1 479 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 FSD2A1L4K1 749 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 GTPBP10A4D1E9 387 aaKnown RBP8.25□□□□□ -1.09
MSH6-211ENST00000606499 GOLGA6L3A6NEY3 463 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 EPHB6O15197 1021 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 TADA2AO75478 443 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 FGF18O76093 207 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 CSPG5O95196 566 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 STAU1O95793 577 aaKnown RBP8.25□□□□□ -1.09
MSH6-211ENST00000606499 PON1P27169 355 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 ATICP31939 592 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 PPM1AP35813 382 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 BMPR1AP36894 532 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 PNPLA4P41247 253 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 ASPAP45381 313 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 RAP1GAPP47736 663 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 AARSP49588 968 aaKnown RBP eCLIP8.25□□□□□ -1.09
MSH6-211ENST00000606499 TNNC1P63316 161 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 KCNMA1Q12791 1236 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 CETN1Q12798 172 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 MYO1EQ12965 1108 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 NR1I3Q14994 352 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 SGSM1Q2NKQ1 1148 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 WDR72Q3MJ13 1102 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 LRIT3Q3SXY7 679 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 TIGD5Q53EQ6 642 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 ZNF667Q5HYK9 610 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 DPY19L2P1Q6NXN4 242 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 FUT10Q6P4F1 479 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 DSTYKQ6XUX3 929 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 TAS1R1Q7RTX1 841 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 KLHL23Q8NBE8 558 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 EHBP1Q8NDI1 1231 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 TAF4BQ92750 862 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 KAT5Q92993 513 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 TATDN2Q93075 761 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 TIFAQ96CG3 184 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 TMEM169Q96HH4 297 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 SENP8Q96LD8 212 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 TGS1Q96RS0 853 aaKnown RBP8.25□□□□□ -1.09
MSH6-211ENST00000606499 COLEC11Q9BWP8 271 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 LSM14BQ9BX40 385 aaKnown RBP8.25□□□□□ -1.09
MSH6-211ENST00000606499 GPR62Q9BZJ7 368 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 IMPG2Q9BZV3 1241 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 NIF3L1Q9GZT8 377 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 SDCBP2Q9H190 292 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 SMYD3Q9H7B4 428 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 SLC28A3Q9HAS3 691 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 AAASQ9NRG9 546 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 FAM207AQ9NSI2 230 aaPredicted RBP8.25□□□□□ -1.09
MSH6-211ENST00000606499 L1RE1Q9UN81 338 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 PCDHB12Q9Y5F1 795 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 SNX9Q9Y5X1 595 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 TRIOBPQ9H2D6 2365 aa8.25□□□□□ -1.09
MSH6-211ENST00000606499 PLXNA3P51805 1871 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 EPOPA6NHQ4 379 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 M0QZQ0 153 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 SOX1O00570 391 aaPredicted RBP8.24□□□□□ -1.09
MSH6-211ENST00000606499 CYB561D2O14569 222 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 CBFA2T2O43439 604 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 EFEMP2O95967 443 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 ODC1P11926 461 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 DNAJB1P25685 340 aa8.24□□□□□ -1.09
MSH6-211ENST00000606499 TKTP29401 623 aaKnown RBP8.24□□□□□ -1.09
MSH6-211ENST00000606499 PBX1P40424 430 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms