RNA–Protein interactions for RNA: ENST00000601941.1

BRD4-210, Transcript of bromodomain containing 4, humanhuman

TSL 5

Gene BRD4, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-210ENST00000601941 CTTNBP2NLQ9P2B4 639 aa13.17□□□□□ -0.3
BRD4-210ENST00000601941 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.17□□□□□ -0.3
BRD4-210ENST00000601941 LCMT1Q9UIC8 334 aa13.17□□□□□ -0.3
BRD4-210ENST00000601941 PCDHGC3Q9UN70 934 aa13.17□□□□□ -0.3
BRD4-210ENST00000601941 GINS2Q9Y248 185 aa13.17□□□□□ -0.3
BRD4-210ENST00000601941 V9GYY5 206 aaPredicted RBP13.17□□□□□ -0.3
BRD4-210ENST00000601941 UMODL1Q5DID0 1318 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 MIF4GDA9UHW6 222 aaKnown RBP13.16□□□□□ -0.3
BRD4-210ENST00000601941 THAP12O43422 761 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 MED7O43513 233 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 BUB1BO60566 1050 aaPredicted RBP13.16□□□□□ -0.3
BRD4-210ENST00000601941 CD4P01730 458 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 ITGB3P05106 788 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 KRT19P08727 400 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 H2AFXP16104 143 aaPredicted RBP13.16□□□□□ -0.3
BRD4-210ENST00000601941 FGFR4P22455 802 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 MCM3P25205 808 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 NSFP46459 744 aaKnown RBP13.16□□□□□ -0.3
BRD4-210ENST00000601941 ZNF200P98182 395 aaPredicted RBP13.16□□□□□ -0.3
BRD4-210ENST00000601941 C1QBPQ07021 282 aaKnown RBP13.16□□□□□ -0.3
BRD4-210ENST00000601941 MYO1EQ12965 1108 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 ZBTB6Q15916 424 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 XKR4Q5GH76 650 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 LIN9Q5TKA1 542 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 CXCL17Q6UXB2 119 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 RNF180Q86T96 592 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 MCOLN2Q8IZK6 566 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 MMGT1Q8N4V1 131 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 BEST2Q8NFU1 509 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 ZNF606Q8WXB4 792 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 RUBCNQ92622 972 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 ZNF653Q96CK0 615 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 HES6Q96HZ4 224 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 HPDLQ96IR7 371 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 MMS19Q96T76 1030 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 TSEN34Q9BSV6 310 aaKnown RBP13.16□□□□□ -0.3
BRD4-210ENST00000601941 ACP6Q9NPH0 428 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 CNTN3Q9P232 1028 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 DDX20Q9UHI6 824 aaKnown RBP13.16□□□□□ -0.3
BRD4-210ENST00000601941 KIAA1257Q9ULG3 409 aa13.16□□□□□ -0.3
BRD4-210ENST00000601941 TARSL2A2RTX5 802 aaKnown RBP13.15□□□□□ -0.3
BRD4-210ENST00000601941 ZNF185O15231 689 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 NCK2O43639 380 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 CAND2O75155 1236 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 TRPA1O75762 1119 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 ASGR1P07306 291 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 KCNE1P15382 129 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 ATF7P17544 494 aaPredicted RBP13.15□□□□□ -0.3
BRD4-210ENST00000601941 CYP3A5P20815 502 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 CCND3P30281 292 aaPredicted RBP13.15□□□□□ -0.3
BRD4-210ENST00000601941 CDH5P33151 784 aaPredicted RBP13.15□□□□□ -0.3
BRD4-210ENST00000601941 NOMO3P69849 1222 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 TRIM32Q13049 653 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 BRD3Q15059 726 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 KCNA10Q16322 511 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 WDR72Q3MJ13 1102 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 GDF6Q6KF10 455 aaPredicted RBP13.15□□□□□ -0.3
BRD4-210ENST00000601941 HACE1Q8IYU2 909 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 LRRC52Q8N7C0 313 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 TMEM35BQ8NCS4 154 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 CD99L2Q8TCZ2 262 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 ACTRT1Q8TDG2 376 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 COG1Q8WTW3 980 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 ELMO3Q96BJ8 720 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 CAPZA3Q96KX2 299 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 MRPL47Q9HD33 250 aaKnown RBP13.15□□□□□ -0.3
BRD4-210ENST00000601941 OSGEPQ9NPF4 335 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 SAGE1Q9NXZ1 904 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 SNTG2Q9NY99 539 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 TTC7AQ9ULT0 858 aaPredicted RBP13.15□□□□□ -0.3
BRD4-210ENST00000601941 UBQLN1Q9UMX0 589 aaKnown RBP13.15□□□□□ -0.3
BRD4-210ENST00000601941 AGAP1Q9UPQ3 857 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 PIN4Q9Y237 131 aaKnown RBP13.15□□□□□ -0.3
BRD4-210ENST00000601941 CEP83Q9Y592 693 aa13.15□□□□□ -0.3
BRD4-210ENST00000601941 PDCD11Q14690 1871 aaKnown RBP13.14□□□□□ -0.31
BRD4-210ENST00000601941 MOXD2PA6NHM9 499 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 PDE2AO00408 941 aaPredicted RBP13.14□□□□□ -0.31
BRD4-210ENST00000601941 TLR3O15455 904 aaKnown RBP13.14□□□□□ -0.31
BRD4-210ENST00000601941 ELNP15502 786 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 POLR2BP30876 1174 aaKnown RBP13.14□□□□□ -0.31
BRD4-210ENST00000601941 TNNC1P63316 161 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 GLE1Q53GS7 698 aaKnown RBP13.14□□□□□ -0.31
BRD4-210ENST00000601941 UBXN11Q5T124 520 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 NAA35Q5VZE5 725 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 MON1BQ7L1V2 547 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 DNAAF5Q86Y56 855 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 SLAIN1Q8ND83 568 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 SPATA4Q8NEY3 305 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 ZNF564Q8TBZ8 553 aaPredicted RBP13.14□□□□□ -0.31
BRD4-210ENST00000601941 RAET1EQ8TD07 263 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 TMEM40Q8WWA1 233 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 CYFIP2Q96F07 1278 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 NUP85Q9BW27 656 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 EIF2AQ9BY44 585 aaKnown RBP13.14□□□□□ -0.31
BRD4-210ENST00000601941 SEZ6LQ9BYH1 1024 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 DNAI2Q9GZS0 605 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 WNT8AQ9H1J5 351 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 LHX5Q9H2C1 402 aa13.14□□□□□ -0.31
BRD4-210ENST00000601941 NXF1Q9UBU9 619 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms