RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 DNAJC25Q9H1X3 360 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 TMEM60Q9H2L4 133 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 CRISPLD1Q9H336 500 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 AFF4Q9UHB7 1163 aaKnown RBP17.58■□□□□ 0.4
SSBP4-211ENST00000601614 NUP205Q92621 2012 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 SPEGQ15772 3267 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 ANK1P16157 1881 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 A0A1W2PRU2 124 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 H7C4K7 107 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 CYP11B2P19099 503 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 DGKKQ5KSL6 1271 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 PLA2G2CQ5R387 149 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 PADI6Q6TGC4 694 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 YAF2Q8IY57 180 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 LEMD2Q8NC56 503 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 GAB3Q8WWW8 586 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 C18orf25Q96B23 403 aaPredicted RBP17.57■□□□□ 0.4
SSBP4-211ENST00000601614 CDT1Q9H211 546 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 SLITRK6Q9H5Y7 841 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 ZMIZ1Q9ULJ6 1067 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 YIPF1Q9Y548 306 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 CYP46A1Q9Y6A2 500 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 DENND4CQ5VZ89 1909 aa17.57■□□□□ 0.4
SSBP4-211ENST00000601614 KRT2P35908 639 aa17.56■□□□□ 0.4
SSBP4-211ENST00000601614 GRM5P41594 1212 aa17.56■□□□□ 0.4
SSBP4-211ENST00000601614 TCEAL6Q6IPX3 200 aa17.56■□□□□ 0.4
SSBP4-211ENST00000601614 PSAPL1Q6NUJ1 521 aa17.56■□□□□ 0.4
SSBP4-211ENST00000601614 C1orf228Q6PIY5 440 aa17.56■□□□□ 0.4
SSBP4-211ENST00000601614 RALGPS2Q86X27 583 aaPredicted RBP17.56■□□□□ 0.4
SSBP4-211ENST00000601614 ARID3BQ8IVW6 561 aaPredicted RBP17.56■□□□□ 0.4
SSBP4-211ENST00000601614 TCEAL3Q969E4 200 aa17.56■□□□□ 0.4
SSBP4-211ENST00000601614 LOXL4Q96JB6 756 aa17.56■□□□□ 0.4
SSBP4-211ENST00000601614 SUSD3Q96L08 255 aa17.56■□□□□ 0.4
SSBP4-211ENST00000601614 TMEM121BQ9BXQ6 578 aaPredicted RBP17.56■□□□□ 0.4
SSBP4-211ENST00000601614 TUFT1Q9NNX1 390 aa17.56■□□□□ 0.4
SSBP4-211ENST00000601614 MYO16Q9Y6X6 1858 aa17.56■□□□□ 0.4
SSBP4-211ENST00000601614 LAMA1P25391 3075 aa17.56■□□□□ 0.4
SSBP4-211ENST00000601614 GIPC1O14908 333 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 NEMFO60524 1076 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 RPP40O75818 363 aaKnown RBP17.55■□□□□ 0.4
SSBP4-211ENST00000601614 OR4Q2P0C623 313 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 FDPSP14324 419 aaKnown RBP17.55■□□□□ 0.4
SSBP4-211ENST00000601614 XBP1P17861 261 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 TNK2Q07912 1038 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 ZNF280DQ6N043 979 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 UNQ6494/PRO21346Q6UXR6 183 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 BEST2Q8NFU1 509 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 DDX12PQ92771 950 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 E2F7Q96AV8 911 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 GPR88Q9GZN0 384 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 PTPRHQ9HD43 1115 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 POLR3BQ9NW08 1133 aaPredicted RBP17.55■□□□□ 0.4
SSBP4-211ENST00000601614 WASF3Q9UPY6 502 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 TNFSF13BQ9Y275 285 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 NUB1Q9Y5A7 615 aa17.55■□□□□ 0.4
SSBP4-211ENST00000601614 KIAA1549LQ6ZVL6 1849 aa17.54■□□□□ 0.4
SSBP4-211ENST00000601614 ZNF638Q14966 1978 aaKnown RBP17.54■□□□□ 0.4
SSBP4-211ENST00000601614 CPB1P15086 417 aa17.54■□□□□ 0.4
SSBP4-211ENST00000601614 SPINK2P20155 84 aa17.54■□□□□ 0.4
SSBP4-211ENST00000601614 MPLP40238 635 aa17.54■□□□□ 0.4
SSBP4-211ENST00000601614 CACNB1Q02641 598 aaPredicted RBP17.54■□□□□ 0.4
SSBP4-211ENST00000601614 GAREM2Q75VX8 874 aa17.54■□□□□ 0.4
SSBP4-211ENST00000601614 CACNA2D4Q7Z3S7 1137 aa17.54■□□□□ 0.4
SSBP4-211ENST00000601614 TBC1D32Q96NH3 1257 aa17.54■□□□□ 0.4
SSBP4-211ENST00000601614 PGLYRP2Q96PD5 576 aa17.54■□□□□ 0.4
SSBP4-211ENST00000601614 NACC1Q96RE7 527 aa17.54■□□□□ 0.4
SSBP4-211ENST00000601614 ACO2Q99798 780 aaKnown RBP17.54■□□□□ 0.4
SSBP4-211ENST00000601614 CCDC94Q9BW85 323 aaPredicted RBP17.54■□□□□ 0.4
SSBP4-211ENST00000601614 SLC38A7Q9NVC3 462 aa17.54■□□□□ 0.4
SSBP4-211ENST00000601614 ORC3Q9UBD5 711 aaPredicted RBP17.54■□□□□ 0.4
SSBP4-211ENST00000601614 ABCA7Q8IZY2 2146 aa17.54■□□□□ 0.4
SSBP4-211ENST00000601614 PKD1L2Q7Z442 2459 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 ARHGEF35A5YM69 484 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 BTBD18B2RXH4 712 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 ABLIM1O14639 778 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 CDKL5O76039 1030 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 TOP3BO95985 862 aaKnown RBP17.53■□□□□ 0.4
SSBP4-211ENST00000601614 KCNE1P15382 129 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 MCM4P33991 863 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 YARSP54577 528 aaKnown RBP17.53■□□□□ 0.4
SSBP4-211ENST00000601614 PPP2R5AQ15172 486 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 ZNF568Q3ZCX4 644 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 TAS1R3Q7RTX0 852 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 CHFRQ96EP1 664 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 POLR3CQ9BUI4 534 aaPredicted RBP17.53■□□□□ 0.4
SSBP4-211ENST00000601614 TOPORSQ9NS56 1045 aaPredicted RBP17.53■□□□□ 0.4
SSBP4-211ENST00000601614 CNTN3Q9P232 1028 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 TPCN1Q9ULQ1 816 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 MAFFQ9ULX9 164 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 TSC2P49815 1807 aa17.53■□□□□ 0.4
SSBP4-211ENST00000601614 OBSL1O75147 1896 aa17.52■□□□□ 0.4
SSBP4-211ENST00000601614 PRAMEF12O95522 483 aa17.52■□□□□ 0.4
SSBP4-211ENST00000601614 RPL9P32969 192 aaKnown RBP17.52■□□□□ 0.4
SSBP4-211ENST00000601614 EFNA5P52803 228 aa17.52■□□□□ 0.4
SSBP4-211ENST00000601614 DUSP4Q13115 394 aa17.52■□□□□ 0.4
SSBP4-211ENST00000601614 ECM1Q16610 540 aa17.52■□□□□ 0.4
SSBP4-211ENST00000601614 ARHGAP29Q52LW3 1261 aa17.52■□□□□ 0.4
SSBP4-211ENST00000601614 RNF43Q68DV7 783 aa17.52■□□□□ 0.4
SSBP4-211ENST00000601614 SYNPOQ8N3V7 929 aa17.52■□□□□ 0.4
SSBP4-211ENST00000601614 TTC9BQ8N6N2 239 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms