RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 SEC31AO94979 1220 aaKnown RBP14.16□□□□□ -0.14
VRK3-205ENST00000593919 ATP1A1P05023 1023 aaKnown RBP14.16□□□□□ -0.14
VRK3-205ENST00000593919 FAM228BP0C875 321 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 TBXAS1P24557 533 aaPredicted RBP14.16□□□□□ -0.14
VRK3-205ENST00000593919 ATN1P54259 1190 aaPredicted RBP14.16□□□□□ -0.14
VRK3-205ENST00000593919 OLIG1Q8TAK6 271 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 SPOCK2Q92563 424 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 PARD6BQ9BYG5 372 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 TSGA10Q9BZW7 698 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 DPP3Q9NY33 737 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 ITGA11Q9UKX5 1188 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 DERAQ9Y315 318 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 PCDHA13Q9Y5I0 950 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 MEIS3P2A8K0S8 358 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 CYP26A1O43174 497 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 PQBP1O60828 265 aaKnown RBP14.16□□□□□ -0.14
VRK3-205ENST00000593919 POLR2BP30876 1174 aaKnown RBP14.16□□□□□ -0.14
VRK3-205ENST00000593919 CTCFP49711 727 aaPredicted RBP14.16□□□□□ -0.14
VRK3-205ENST00000593919 ZBTB6Q15916 424 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 PKN2Q16513 984 aaKnown RBP14.16□□□□□ -0.14
VRK3-205ENST00000593919 XKR4Q5GH76 650 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 EPS8L1Q8TE68 723 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 SECISBP2LQ93073 1101 aaKnown RBP14.16□□□□□ -0.14
VRK3-205ENST00000593919 SYT11Q9BT88 431 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 NIF3L1Q9GZT8 377 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 ACP6Q9NPH0 428 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 TUBGCP4Q9UGJ1 667 aa14.16□□□□□ -0.14
VRK3-205ENST00000593919 SMIM28A0A1B0GU29 152 aa14.15□□□□□ -0.14
VRK3-205ENST00000593919 CTAGE15A4D2H0 777 aa14.15□□□□□ -0.14
VRK3-205ENST00000593919 CTAGE8P0CG41 777 aa14.15□□□□□ -0.14
VRK3-205ENST00000593919 KRT5P13647 590 aa14.15□□□□□ -0.14
VRK3-205ENST00000593919 ACO1P21399 889 aaKnown RBP14.15□□□□□ -0.14
VRK3-205ENST00000593919 BRD2P25440 801 aaKnown RBP14.15□□□□□ -0.14
VRK3-205ENST00000593919 DSC3Q14574 896 aa14.15□□□□□ -0.14
VRK3-205ENST00000593919 BMS1Q14692 1282 aaKnown RBP14.15□□□□□ -0.14
VRK3-205ENST00000593919 LRRC8DQ7L1W4 858 aa14.15□□□□□ -0.14
VRK3-205ENST00000593919 CTAGE6Q86UF2 777 aa14.15□□□□□ -0.14
VRK3-205ENST00000593919 SLC47A2Q86VL8 602 aa14.15□□□□□ -0.14
VRK3-205ENST00000593919 CTAGE4Q8IX94 777 aa14.15□□□□□ -0.14
VRK3-205ENST00000593919 DIS3LQ8TF46 1054 aaKnown RBP14.15□□□□□ -0.14
VRK3-205ENST00000593919 C18orf25Q96B23 403 aaPredicted RBP14.15□□□□□ -0.14
VRK3-205ENST00000593919 PRDM10Q9NQV6 1147 aa14.15□□□□□ -0.14
VRK3-205ENST00000593919 SELPP16109 830 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 ANXA13P27216 316 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 ASPAP45381 313 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 WDR72Q3MJ13 1102 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 SLC39A5Q6ZMH5 540 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 SCARA5Q6ZMJ2 495 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 VPS36Q86VN1 386 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 GLYCTKQ8IVS8 523 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 LNX1Q8TBB1 728 aaPredicted RBP14.14□□□□□ -0.15
VRK3-205ENST00000593919 SLC20A1Q8WUM9 679 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 TAF4BQ92750 862 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 LPPQ93052 612 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 ZFP42Q96MM3 310 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 ADAM2Q99965 735 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 TRAIPQ9BWF2 469 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 AGAP1Q9UPQ3 857 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 DDX3XO00571 662 aaKnown RBP eCLIP14.14□□□□□ -0.153e-12■■□□□ 11.9
VRK3-205ENST00000593919 SRGAP2O75044 1071 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 ITGA4P13612 1032 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 KCNE1P15382 129 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 ATICP31939 592 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 BFSP2Q13515 415 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 ZNF667Q5HYK9 610 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 NOP9Q86U38 636 aaKnown RBP14.14□□□□□ -0.15
VRK3-205ENST00000593919 HACE1Q8IYU2 909 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 KRT222Q8N1A0 295 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 BEST2Q8NFU1 509 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 VRTNQ9H8Y1 702 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 NXF1Q9UBU9 619 aaKnown RBP14.14□□□□□ -0.15
VRK3-205ENST00000593919 NAGPAQ9UK23 515 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 NOCTQ9UK39 431 aaKnown RBP14.14□□□□□ -0.15
VRK3-205ENST00000593919 UBQLN1Q9UMX0 589 aaKnown RBP14.14□□□□□ -0.15
VRK3-205ENST00000593919 POLIQ9UNA4 740 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 SAR1BQ9Y6B6 198 aa14.14□□□□□ -0.15
VRK3-205ENST00000593919 A0A0U1RQF3 1178 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 PITPNM1O00562 1244 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 PTGESO14684 152 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 PPEF2O14830 753 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 ZRANB2O95218 330 aaKnown RBP eCLIP14.13□□□□□ -0.15
VRK3-205ENST00000593919 MOCS3O95396 460 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 RHOXF2BP0C7M4 288 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 CYP11B1P15538 503 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 ATF7P17544 494 aaPredicted RBP14.13□□□□□ -0.15
VRK3-205ENST00000593919 MLH1P40692 756 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 MAGEA1P43355 309 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 GJA8P48165 433 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 RAB27AP51159 221 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 PDE6CP51160 858 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 RBP5P82980 135 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 CC2D1AQ6P1N0 951 aaPredicted RBP14.13□□□□□ -0.15
VRK3-205ENST00000593919 TMEM270Q6UE05 265 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 ANKRD33Q7Z3H0 272 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 UBR7Q8N806 425 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 SLC30A5Q8TAD4 765 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 HPDLQ96IR7 371 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 CAPZA3Q96KX2 299 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 RHOXF2Q9BQY4 288 aa14.13□□□□□ -0.15
VRK3-205ENST00000593919 ANKZF1Q9H8Y5 726 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms