RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PSMC3P17980 439 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 LRPAP1P30533 357 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 GDI1P31150 447 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 MATR3P43243 847 aaKnown RBP eCLIP17.82■□□□□ 0.44
LIG1-205ENST00000593425 GUCY2FP51841 1108 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 SMTNP53814 917 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 NCKAP1LP55160 1127 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 YWHAHQ04917 246 aaPredicted RBP17.82■□□□□ 0.44
LIG1-205ENST00000593425 PUM1Q14671 1186 aaKnown RBP eCLIP17.82■□□□□ 0.447e-11■□□□□ 8.5
LIG1-205ENST00000593425 TEAD2Q15562 447 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 BEST2Q8NFU1 509 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 SHKBP1Q8TBC3 707 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 ZSCAN18Q8TBC5 510 aaPredicted RBP17.82■□□□□ 0.44
LIG1-205ENST00000593425 IRF7Q92985 503 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 PGLYRP2Q96PD5 576 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 EPC1Q9H2F5 836 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 CRISPLD1Q9H336 500 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 ASAH2Q9NR71 780 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 DLL3Q9NYJ7 618 aa17.82■□□□□ 0.44
LIG1-205ENST00000593425 SMG5Q9UPR3 1016 aaKnown RBP17.82■□□□□ 0.44
LIG1-205ENST00000593425 VWA3AA6NCI4 1184 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 PLA2G4BP0C869 781 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 MARCKSP29966 332 aaPredicted RBP17.81■□□□□ 0.44
LIG1-205ENST00000593425 AARSP49588 968 aaKnown RBP eCLIP17.81■□□□□ 0.44
LIG1-205ENST00000593425 ZBTB6Q15916 424 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 TMEM119Q4V9L6 283 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 RILPL1Q5EBL4 403 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 MCTP1Q6DN14 999 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 TMC8Q8IU68 726 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 LEMD2Q8NC56 503 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 RSPRY1Q96DX4 576 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 KIF12Q96FN5 646 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 BORCS6Q96GS4 357 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 LRRC3Q9BY71 257 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 DNAJC25Q9H1X3 360 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 CHRDQ9H2X0 955 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 PLEKHA5Q9HAU0 1116 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 TRPV5Q9NQA5 729 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 MAFFQ9ULX9 164 aa17.81■□□□□ 0.44
LIG1-205ENST00000593425 UBQLN1Q9UMX0 589 aaKnown RBP17.81■□□□□ 0.44
LIG1-205ENST00000593425 NUP210Q8TEM1 1887 aaPredicted RBP17.8■□□□□ 0.44
LIG1-205ENST00000593425 MAN2B1O00754 1011 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 PPEF2O14830 753 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 FAM189A1O60320 539 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 OAZ2O95190 189 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 CLTAP09496 248 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 TDGF1P13385 188 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 PPP2R3AQ06190 1150 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 RSPO4Q2I0M5 234 aaPredicted RBP17.8■□□□□ 0.44
LIG1-205ENST00000593425 ARSHQ5FYA8 562 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 ERICH6BQ5W0A0 696 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 LRRC15Q8TF66 581 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 DEPDC1BQ8WUY9 529 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 FAM3CQ92520 227 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 BICD1Q96G01 975 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 TRPV4Q9HBA0 871 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 KCND2Q9NZV8 630 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 KCNG1Q9UIX4 513 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 PIAS3Q9Y6X2 628 aa17.8■□□□□ 0.44
LIG1-205ENST00000593425 CACNA1AO00555 2505 aa17.79■□□□□ 0.44
LIG1-205ENST00000593425 A0A1W2PRU2 124 aa17.79■□□□□ 0.44
LIG1-205ENST00000593425 HEPACAM2A8MVW5 462 aa17.79■□□□□ 0.44
LIG1-205ENST00000593425 LACTBL1A8MY62 500 aa17.79■□□□□ 0.44
LIG1-205ENST00000593425 ARNTLO00327 626 aa17.79■□□□□ 0.44
LIG1-205ENST00000593425 CYP3A5P20815 502 aa17.79■□□□□ 0.44
LIG1-205ENST00000593425 ENOX2Q16206 610 aaKnown RBP17.79■□□□□ 0.44
LIG1-205ENST00000593425 STXBP5Q5T5C0 1151 aa17.79■□□□□ 0.44
LIG1-205ENST00000593425 HAUS6Q7Z4H7 955 aa17.79■□□□□ 0.44
LIG1-205ENST00000593425 MFSD6LQ8IWD5 586 aa17.79■□□□□ 0.44
LIG1-205ENST00000593425 KCTD17Q8N5Z5 321 aa17.79■□□□□ 0.44
LIG1-205ENST00000593425 CDK5RAP3Q96JB5 506 aa17.79■□□□□ 0.44
LIG1-205ENST00000593425 LMAN1LQ9HAT1 526 aa17.79■□□□□ 0.44
LIG1-205ENST00000593425 LARSQ9P2J5 1176 aaKnown RBP17.79■□□□□ 0.44
LIG1-205ENST00000593425 ZNF263O14978 683 aa17.78■□□□□ 0.44
LIG1-205ENST00000593425 LIG4P49917 911 aa17.78■□□□□ 0.44
LIG1-205ENST00000593425 DUSP4Q13115 394 aa17.78■□□□□ 0.44
LIG1-205ENST00000593425 GPR17Q13304 367 aa17.78■□□□□ 0.44
LIG1-205ENST00000593425 C8orf34Q49A92 452 aa17.78■□□□□ 0.44
LIG1-205ENST00000593425 DSTYKQ6XUX3 929 aa17.78■□□□□ 0.44
LIG1-205ENST00000593425 USP37Q86T82 979 aa17.78■□□□□ 0.44
LIG1-205ENST00000593425 TTC9BQ8N6N2 239 aa17.78■□□□□ 0.44
LIG1-205ENST00000593425 KCNN1Q92952 543 aa17.78■□□□□ 0.44
LIG1-205ENST00000593425 TMEM209Q96SK2 561 aa17.78■□□□□ 0.44
LIG1-205ENST00000593425 REEP2Q9BRK0 252 aa17.78■□□□□ 0.44
LIG1-205ENST00000593425 SLITRK6Q9H5Y7 841 aa17.78■□□□□ 0.44
LIG1-205ENST00000593425 FRYLO94915 3013 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 MTMR11A4FU01 709 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 OR6C75A6NL08 312 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 H0YCG3 227 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 K7ENM7 598 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 HNRNPDLO14979 420 aaKnown RBP17.77■□□□□ 0.44
LIG1-205ENST00000593425 CHRNB1P11230 501 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 CCNE1P24864 410 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 PLD1Q13393 1074 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 GAS6Q14393 721 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 CENPPQ6IPU0 288 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 SLC39A4Q6P5W5 647 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 GPBP1Q86WP2 473 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 GPIHBP1Q8IV16 184 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 MKNK1Q9BUB5 465 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms