RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 RBM12Q9NTZ6 932 aaKnown RBP15.46■□□□□ 0.07
SAFB2-205ENST00000590000 TIMM13Q9Y5L4 95 aaPredicted RBP15.46■□□□□ 0.07
SAFB2-205ENST00000590000 VWA3AA6NCI4 1184 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 PRRG1O14668 218 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 SLC16A4O15374 487 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 HARSP12081 509 aaKnown RBP15.45■□□□□ 0.06
SAFB2-205ENST00000590000 PDCP20941 246 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 MUTP22033 750 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 PRPHP41219 470 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 MAGEA9P43362 315 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 ATP2C1P98194 919 aaPredicted RBP15.45■□□□□ 0.06
SAFB2-205ENST00000590000 TWF1Q12792 350 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 CTXN3Q4LDR2 81 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 TXNDC11Q6PKC3 985 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 HSCBQ8IWL3 235 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 BEST2Q8NFU1 509 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 SNX29Q8TEQ0 813 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 IFT74Q96LB3 600 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 PNMA5Q96PV4 448 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 NELL2Q99435 816 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 PLIN2Q99541 437 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 CCDC94Q9BW85 323 aaPredicted RBP15.45■□□□□ 0.06
SAFB2-205ENST00000590000 BRD9Q9H8M2 597 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 LMAN1LQ9HAT1 526 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 ZFP14Q9HCL3 533 aa15.45■□□□□ 0.06
SAFB2-205ENST00000590000 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.45■□□□□ 0.06
SAFB2-205ENST00000590000 LAD1O00515 517 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 HRO43593 1189 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 TRAPPC3O43617 180 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 MCF2P10911 925 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 MYL4P12829 197 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 CDR1P51861 262 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 SF3A1Q15459 793 aaKnown RBP15.44■□□□□ 0.06
SAFB2-205ENST00000590000 ZBTB6Q15916 424 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 FOXD4L5Q5VV16 416 aaPredicted RBP15.44■□□□□ 0.06
SAFB2-205ENST00000590000 MPZL3Q6UWV2 235 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 MAMSTRQ6ZN01 415 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 Q6ZS52 159 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 ZSCAN18Q8TBC5 510 aaPredicted RBP15.44■□□□□ 0.06
SAFB2-205ENST00000590000 FOXD4L4Q8WXT5 416 aaPredicted RBP15.44■□□□□ 0.06
SAFB2-205ENST00000590000 SMARCD2Q92925 531 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 ACAP3Q96P50 834 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 TMEM209Q96SK2 561 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 TRMT61BQ9BVS5 477 aaKnown RBP15.44■□□□□ 0.06
SAFB2-205ENST00000590000 MRPL4Q9BYD3 311 aaKnown RBP15.44■□□□□ 0.06
SAFB2-205ENST00000590000 AFF4Q9UHB7 1163 aaKnown RBP15.44■□□□□ 0.06
SAFB2-205ENST00000590000 MTMR6Q9Y217 621 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 YIPF1Q9Y548 306 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 CLIC4Q9Y696 253 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 PIAS3Q9Y6X2 628 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 RALGAPA1Q6GYQ0 2036 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 ATG2BQ96BY7 2078 aa15.44■□□□□ 0.06
SAFB2-205ENST00000590000 NPHP3-ACAD11A0A0J9YXS1 232 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 HEPACAM2A8MVW5 462 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 K7ESF4 209 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 SOAT2O75908 522 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 MICAL2O94851 1124 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 CXCL8P10145 99 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 PSMC3P17980 439 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 CCNE1P24864 410 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 TNFSF9P41273 254 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 AARSP49588 968 aaKnown RBP eCLIP15.43■□□□□ 0.06
SAFB2-205ENST00000590000 CEBPZQ03701 1054 aaKnown RBP15.43■□□□□ 0.06
SAFB2-205ENST00000590000 RAD51AP2Q09MP3 1159 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 SPEM2Q0P670 501 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 RESTQ13127 1097 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 KRT79Q5XKE5 535 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 TPGS2Q68CL5 300 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 HAUS3Q68CZ6 603 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 PDZD4Q76G19 769 aaPredicted RBP15.43■□□□□ 0.06
SAFB2-205ENST00000590000 BRAPQ7Z569 592 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 TMEM161BQ8NDZ6 487 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 FAM3CQ92520 227 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 PGLYRP2Q96PD5 576 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 RAB34Q9BZG1 259 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 TRPV4Q9HBA0 871 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 TRPV5Q9NQA5 729 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 NUP210Q8TEM1 1887 aaPredicted RBP15.43■□□□□ 0.06
SAFB2-205ENST00000590000 EML5Q05BV3 1969 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 CHD6Q8TD26 2715 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 SCN1AP35498 2009 aa15.43■□□□□ 0.06
SAFB2-205ENST00000590000 STX6O43752 255 aa15.42■□□□□ 0.06
SAFB2-205ENST00000590000 FAM189A1O60320 539 aa15.42■□□□□ 0.06
SAFB2-205ENST00000590000 ELF1P32519 619 aa15.42■□□□□ 0.06
SAFB2-205ENST00000590000 RPL9P32969 192 aaKnown RBP15.42■□□□□ 0.06
SAFB2-205ENST00000590000 GRIN1Q05586 938 aa15.42■□□□□ 0.06
SAFB2-205ENST00000590000 GAREM2Q75VX8 874 aa15.42■□□□□ 0.06
SAFB2-205ENST00000590000 TTC8Q8TAM2 541 aa15.42■□□□□ 0.06
SAFB2-205ENST00000590000 CHFRQ96EP1 664 aa15.42■□□□□ 0.06
SAFB2-205ENST00000590000 ZFYVE19Q96K21 471 aa15.42■□□□□ 0.06
SAFB2-205ENST00000590000 NTPCRQ9BSD7 190 aaKnown RBP15.42■□□□□ 0.06
SAFB2-205ENST00000590000 KMT5AQ9NQR1 393 aa15.42■□□□□ 0.06
SAFB2-205ENST00000590000 TOPORSQ9NS56 1045 aaPredicted RBP15.42■□□□□ 0.06
SAFB2-205ENST00000590000 SLC38A7Q9NVC3 462 aa15.42■□□□□ 0.06
SAFB2-205ENST00000590000 USP18Q9UMW8 372 aa15.42■□□□□ 0.06
SAFB2-205ENST00000590000 PCDHB8Q9UN66 801 aa15.42■□□□□ 0.06
SAFB2-205ENST00000590000 CFAP47Q6ZTR5 3102 aa15.41■□□□□ 0.06
SAFB2-205ENST00000590000 A0A1W2PRU2 124 aa15.41■□□□□ 0.06
SAFB2-205ENST00000590000 TTC26A0AVF1 554 aa15.41■□□□□ 0.06
SAFB2-205ENST00000590000 SLC38A8A6NNN8 435 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms