RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 PSMC3IPQ9P2W1 217 aaPredicted RBP17.43■□□□□ 0.38
RANBP3-209ENST00000587411 SIGLEC16A6NMB1 481 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 ZBED4O75132 1171 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 FDX1P10109 184 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 UNGP13051 313 aaPredicted RBP17.42■□□□□ 0.38
RANBP3-209ENST00000587411 CETN2P41208 172 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 GTF2BQ00403 316 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 NFIAQ12857 509 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 MTDHQ86UE4 582 aaKnown RBP17.42■□□□□ 0.38
RANBP3-209ENST00000587411 TRAPPC9Q96Q05 1148 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.42■□□□□ 0.38
RANBP3-209ENST00000587411 DLGAP2Q9P1A6 1054 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.42■□□□□ 0.38
RANBP3-209ENST00000587411 ADRB2P07550 413 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 TAL1P17542 331 aaPredicted RBP17.42■□□□□ 0.38
RANBP3-209ENST00000587411 CCDC142Q17RM4 750 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 KHDC1Q4VXA5 237 aaKnown RBP17.42■□□□□ 0.38
RANBP3-209ENST00000587411 APOBEC3HQ6NTF7 200 aaKnown RBP17.42■□□□□ 0.38
RANBP3-209ENST00000587411 AMIGO3Q86WK7 504 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 EXD1Q8NHP7 514 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 MIPEPQ99797 713 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 BTBD10Q9BSF8 475 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 NPHS2Q9NP85 383 aa17.42■□□□□ 0.38
RANBP3-209ENST00000587411 RBBP6Q7Z6E9 1792 aaKnown RBP17.41■□□□□ 0.38
RANBP3-209ENST00000587411 POLR2MP0CAP2 368 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 SLURP2P0DP57 97 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 SNX30Q5VWJ9 437 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 LVRNQ6Q4G3 990 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 ZNF677Q86XU0 584 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 FBXL13Q8NEE6 735 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.41■□□□□ 0.38
RANBP3-209ENST00000587411 CADM1Q9BY67 442 aaKnown RBP17.41■□□□□ 0.38
RANBP3-209ENST00000587411 VPS37BQ9H9H4 285 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 PI4KBQ9UBF8 816 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 C2CD2Q9Y426 696 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 UPP2O95045 317 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 SCNN1DP51172 638 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 SHROOM1Q2M3G4 852 aaPredicted RBP17.41■□□□□ 0.38
RANBP3-209ENST00000587411 ZC3H12AQ5D1E8 599 aaKnown RBP17.41■□□□□ 0.38
RANBP3-209ENST00000587411 OR52E8Q6IFG1 317 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 TATDN1Q6P1N9 297 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 HAUS6Q7Z4H7 955 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 WDR35Q9P2L0 1181 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 FETUBQ9UGM5 382 aa17.41■□□□□ 0.38
RANBP3-209ENST00000587411 ATP2A1O14983 1001 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 HAUS5O94927 633 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 CFBP00751 764 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 GTF2H1P32780 548 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 MORF4L2Q15014 288 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 RCN1Q15293 331 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 SNRNP35Q16560 246 aaKnown RBP17.4■□□□□ 0.38
RANBP3-209ENST00000587411 TRAPPC3LQ5T215 181 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 DRICH1Q6PGQ1 229 aaPredicted RBP17.4■□□□□ 0.38
RANBP3-209ENST00000587411 ZFPM1Q8IX07 1006 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 OGFOD1Q8N543 542 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 ZSWIM2Q8NEG5 633 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 IFT43Q96FT9 208 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 RIT2Q99578 217 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 MMADHCQ9H3L0 296 aaPredicted RBP17.4■□□□□ 0.38
RANBP3-209ENST00000587411 RAB20Q9NX57 234 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 CCNL1Q9UK58 526 aaPredicted RBP17.4■□□□□ 0.38
RANBP3-209ENST00000587411 PRR12Q9ULL5 1215 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 UMODL1Q5DID0 1318 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 LOXHD1Q8IVV2 1947 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 ALOX15BO15296 676 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 KRT5P13647 590 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 RFC5P40937 340 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 SLC34A1Q06495 639 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 RFWD3Q6PCD5 774 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 MTHFD1LQ6UB35 978 aa17.4■□□□□ 0.38
RANBP3-209ENST00000587411 PTCD3Q96EY7 689 aaKnown RBP17.4■□□□□ 0.38
RANBP3-209ENST00000587411 FAM196BA6NMK8 535 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 AP1G2O75843 785 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 GCNT1Q02742 428 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 SEPT7Q16181 437 aaKnown RBP17.39■□□□□ 0.37
RANBP3-209ENST00000587411 LIN9Q5TKA1 542 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 CENPUQ71F23 418 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 USP37Q86T82 979 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 PPFIBP2Q8ND30 876 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 TMC2Q8TDI7 906 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 FAM118BQ9BPY3 351 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 SYNCQ9H7C4 482 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 EXOC7Q9UPT5 735 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 IPO5O00410 1097 aaKnown RBP17.39■□□□□ 0.37
RANBP3-209ENST00000587411 GSC2O15499 205 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 LIASO43766 372 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 VIL1P09327 827 aaKnown RBP17.39■□□□□ 0.37
RANBP3-209ENST00000587411 ARP10275 920 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 NSFP46459 744 aaKnown RBP17.39■□□□□ 0.37
RANBP3-209ENST00000587411 SESN3P58005 492 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 RCN2Q14257 317 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 EAPPQ56P03 285 aaPredicted RBP17.39■□□□□ 0.37
RANBP3-209ENST00000587411 EFHC2Q5JST6 749 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 LRRC74BQ6ZQY2 392 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 CBWD2Q8IUF1 395 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 SCG3Q8WXD2 468 aaKnown RBP17.39■□□□□ 0.37
RANBP3-209ENST00000587411 DHX38Q92620 1227 aaKnown RBP17.39■□□□□ 0.37
RANBP3-209ENST00000587411 NSL1Q96IY1 281 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 TIPINQ9BVW5 301 aa17.39■□□□□ 0.37
RANBP3-209ENST00000587411 TRIM55Q9BYV6 548 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms