RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 GRAMD1CQ8IYS0 662 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 PJA1Q8NG27 643 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 ITFG1Q8TB96 612 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 MTRQ99707 1265 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 KXD1Q9BQD3 176 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 MMTAG2Q9BU76 263 aaKnown RBP8.53□□□□□ -1.04
VMP1-204ENST00000587259 ADAM33Q9BZ11 813 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 PRKD2Q9BZL6 878 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 POLD4Q9HCU8 107 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 GPRC5CQ9NQ84 441 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 KANSL3Q9P2N6 904 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 PARP2Q9UGN5 583 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 POLIQ9UNA4 740 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 DNM3Q9UQ16 869 aa8.53□□□□□ -1.04
VMP1-204ENST00000587259 NRG2O14511 850 aaPredicted RBP8.52□□□□□ -1.05
VMP1-204ENST00000587259 DKC1O60832 514 aaKnown RBP eCLIP8.52□□□□□ -1.05
VMP1-204ENST00000587259 ZMYND10O75800 440 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 KRT37O76014 449 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 KIF4AO95239 1232 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 EDN1P05305 212 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 ZNF18P17022 549 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 BMP6P22004 513 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 GLRA2P23416 452 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 EEF1GP26641 437 aaKnown RBP8.52□□□□□ -1.05
VMP1-204ENST00000587259 CDC25AP30304 524 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 RFC5P40937 340 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 PTENP60484 403 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 FANCCQ00597 558 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 LRRC63Q05C16 580 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 UBXN2BQ14CS0 331 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 EPHA7Q15375 998 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 RSPO4Q2I0M5 234 aaPredicted RBP8.52□□□□□ -1.05
VMP1-204ENST00000587259 KMT5BQ4FZB7 885 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 ISM2Q6H9L7 571 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 NOTUMQ6P988 496 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 C4orf19Q8IY42 314 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 SUMF1Q8NBK3 374 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 CCDC112Q8NEF3 446 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 PIGOQ8TEQ8 1089 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 STAMQ92783 540 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 ZDHHC16Q969W1 377 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 CLSTN3Q9BQT9 956 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 COLEC11Q9BWP8 271 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 PLA2G2FQ9BZM2 168 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 TRIM6Q9C030 488 aaPredicted RBP8.52□□□□□ -1.05
VMP1-204ENST00000587259 BLZF1Q9H2G9 400 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 MAGEC2Q9UBF1 373 aaPredicted RBP8.52□□□□□ -1.05
VMP1-204ENST00000587259 ADAM28Q9UKQ2 775 aa8.52□□□□□ -1.05
VMP1-204ENST00000587259 TDRD15B5MCY1 1934 aaKnown RBP8.51□□□□□ -1.05
VMP1-204ENST00000587259 PPP1R3GB7ZBB8 358 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 I3L4J1 428 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 PTGESO14684 152 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 KLRC4O43908 158 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 ZNF500O60304 480 aaPredicted RBP8.51□□□□□ -1.05
VMP1-204ENST00000587259 USO1O60763 962 aaKnown RBP8.51□□□□□ -1.05
VMP1-204ENST00000587259 TADA2AO75478 443 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 SLITRK3O94933 977 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 KRT18P05783 430 aaKnown RBP8.51□□□□□ -1.05
VMP1-204ENST00000587259 C8AP07357 584 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 TPM1P09493 284 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 CSTF1Q05048 431 aaKnown RBP8.51□□□□□ -1.05
VMP1-204ENST00000587259 TRIM14Q14142 442 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 HSP90AA2PQ14568 343 aaPredicted RBP8.51□□□□□ -1.05
VMP1-204ENST00000587259 LPAL2Q16609 132 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 USP41Q3LFD5 358 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 FAM171A1Q5VUB5 890 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 CDKAL1Q5VV42 579 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 PHLDB3Q6NSJ2 640 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 RSPO2Q6UXX9 243 aaPredicted RBP8.51□□□□□ -1.05
VMP1-204ENST00000587259 STXBP4Q6ZWJ1 553 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 TMEM130Q8N3G9 435 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 GUF1Q8N442 669 aaKnown RBP8.51□□□□□ -1.05
VMP1-204ENST00000587259 SLC7A14Q8TBB6 771 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 TCP11Q8WWU5 503 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 NELFBQ8WX92 580 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 RSPH1Q8WYR4 309 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 FGF13Q92913 245 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 IQCDQ96DY2 449 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 CNTNAP3BQ96NU0 1288 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 PNMA5Q96PV4 448 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 TSG101Q99816 390 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 EIF2AK1Q9BQI3 630 aaKnown RBP8.51□□□□□ -1.05
VMP1-204ENST00000587259 JPH2Q9BR39 696 aaPredicted RBP8.51□□□□□ -1.05
VMP1-204ENST00000587259 CNTNAP3Q9BZ76 1288 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 XPO4Q9C0E2 1151 aaKnown RBP8.51□□□□□ -1.05
VMP1-204ENST00000587259 POLR3FQ9H1D9 316 aaPredicted RBP8.51□□□□□ -1.05
VMP1-204ENST00000587259 THAP9Q9H5L6 903 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 BLOC1S4Q9NUP1 217 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 FANCLQ9NW38 375 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 SPATA6Q9NWH7 488 aaPredicted RBP8.51□□□□□ -1.05
VMP1-204ENST00000587259 SNTG2Q9NY99 539 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 IFNKQ9P0W0 207 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 FBXW11Q9UKB1 542 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 CDH7Q9ULB5 785 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 KIAA1024Q9UPX6 916 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 CTNND2Q9UQB3 1225 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 UBE4BO95155 1302 aa8.51□□□□□ -1.05
VMP1-204ENST00000587259 LRRIQ4A6NIV6 560 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 FAM170BA6NMN3 283 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 CCP110O43303 1012 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms