RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 BEST2Q8NFU1 509 aa17.83■□□□□ 0.44
NPC1-205ENST00000587163 DEPDC1BQ8WUY9 529 aa17.83■□□□□ 0.44
NPC1-205ENST00000587163 DRC1Q96MC2 740 aa17.83■□□□□ 0.44
NPC1-205ENST00000587163 NTPCRQ9BSD7 190 aaKnown RBP17.83■□□□□ 0.44
NPC1-205ENST00000587163 MMTAG2Q9BU76 263 aaKnown RBP17.83■□□□□ 0.44
NPC1-205ENST00000587163 CRISPLD1Q9H336 500 aa17.83■□□□□ 0.44
NPC1-205ENST00000587163 ASAH2Q9NR71 780 aa17.83■□□□□ 0.44
NPC1-205ENST00000587163 MAFFQ9ULX9 164 aa17.83■□□□□ 0.44
NPC1-205ENST00000587163 PCDHB6Q9Y5E3 794 aa17.83■□□□□ 0.44
NPC1-205ENST00000587163 TIMM13Q9Y5L4 95 aaPredicted RBP17.83■□□□□ 0.44
NPC1-205ENST00000587163 EPG5Q9HCE0 2579 aa17.83■□□□□ 0.44
NPC1-205ENST00000587163 PDCD11Q14690 1871 aaKnown RBP17.82■□□□□ 0.44
NPC1-205ENST00000587163 OR4Q2P0C623 313 aa17.82■□□□□ 0.44
NPC1-205ENST00000587163 CPB1P15086 417 aa17.82■□□□□ 0.44
NPC1-205ENST00000587163 MARCKSP29966 332 aaPredicted RBP17.82■□□□□ 0.44
NPC1-205ENST00000587163 CCR3P51677 355 aa17.82■□□□□ 0.44
NPC1-205ENST00000587163 SPAG1Q07617 926 aa17.82■□□□□ 0.44
NPC1-205ENST00000587163 RAD51AP2Q09MP3 1159 aa17.82■□□□□ 0.44
NPC1-205ENST00000587163 LEMD2Q8NC56 503 aa17.82■□□□□ 0.44
NPC1-205ENST00000587163 PGLYRP2Q96PD5 576 aa17.82■□□□□ 0.44
NPC1-205ENST00000587163 RTKNQ9BST9 563 aa17.82■□□□□ 0.44
NPC1-205ENST00000587163 HAPLN2Q9GZV7 340 aa17.82■□□□□ 0.44
NPC1-205ENST00000587163 ANKFY1Q9P2R3 1169 aa17.82■□□□□ 0.44
NPC1-205ENST00000587163 LIMCH1Q9UPQ0 1083 aa17.82■□□□□ 0.44
NPC1-205ENST00000587163 YIPF1Q9Y548 306 aa17.82■□□□□ 0.44
NPC1-205ENST00000587163 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.82■□□□□ 0.44
NPC1-205ENST00000587163 KMT2BQ9UMN6 2715 aaPredicted RBP17.81■□□□□ 0.44
NPC1-205ENST00000587163 M0QZQ0 153 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 HRO43593 1189 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 TOM1L1O75674 476 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 OAZ2O95190 189 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 HOXC13P31276 330 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 CXCL12P48061 93 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 SOX9P48436 509 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 GNL2Q13823 731 aaKnown RBP17.81■□□□□ 0.44
NPC1-205ENST00000587163 NOLC1Q14978 699 aaKnown RBP eCLIP17.81■□□□□ 0.44
NPC1-205ENST00000587163 STXBP5Q5T5C0 1151 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 KRT79Q5XKE5 535 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 LAIR1Q6GTX8 287 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 TMC8Q8IU68 726 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 TMEM161BQ8NDZ6 487 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 LRRC3BQ96PB8 259 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 LLPHQ9BRT6 129 aaKnown RBP17.81■□□□□ 0.44
NPC1-205ENST00000587163 IER2Q9BTL4 223 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 DNAJC25Q9H1X3 360 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 SLITRK6Q9H5Y7 841 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 C17orf75Q9HAS0 396 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 RBM12Q9NTZ6 932 aaKnown RBP17.81■□□□□ 0.44
NPC1-205ENST00000587163 RAB23Q9ULC3 237 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 NOL7Q9UMY1 257 aaKnown RBP17.81■□□□□ 0.44
NPC1-205ENST00000587163 STK24Q9Y6E0 443 aa17.81■□□□□ 0.44
NPC1-205ENST00000587163 TPRP12270 2363 aaKnown RBP17.81■□□□□ 0.44
NPC1-205ENST00000587163 CACNA1BQ00975 2339 aa17.8■□□□□ 0.44
NPC1-205ENST00000587163 A0A1W2PRU2 124 aa17.8■□□□□ 0.44
NPC1-205ENST00000587163 SLC38A8A6NNN8 435 aa17.8■□□□□ 0.44
NPC1-205ENST00000587163 CHURC1-FNTBB4DL54 471 aa17.8■□□□□ 0.44
NPC1-205ENST00000587163 SEC24BO95487 1268 aa17.8■□□□□ 0.44
NPC1-205ENST00000587163 CXCL8P10145 99 aa17.8■□□□□ 0.44
NPC1-205ENST00000587163 FNTBP49356 437 aa17.8■□□□□ 0.44
NPC1-205ENST00000587163 YWHAHQ04917 246 aaPredicted RBP17.8■□□□□ 0.44
NPC1-205ENST00000587163 DUSP4Q13115 394 aa17.8■□□□□ 0.44
NPC1-205ENST00000587163 SRSF5Q13243 272 aaKnown RBP17.8■□□□□ 0.44
NPC1-205ENST00000587163 PPP2R5DQ14738 602 aa17.8■□□□□ 0.44
NPC1-205ENST00000587163 PRR23BQ6ZRT6 265 aa17.8■□□□□ 0.44
NPC1-205ENST00000587163 SPIRE2Q8WWL2 714 aa17.8■□□□□ 0.44
NPC1-205ENST00000587163 GPR88Q9GZN0 384 aa17.8■□□□□ 0.44
NPC1-205ENST00000587163 C2orf42Q9NWW7 574 aa17.8■□□□□ 0.44
NPC1-205ENST00000587163 CHADO15335 359 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 RETP07949 1114 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 MAPTP10636 758 aaKnown RBP17.79■□□□□ 0.44
NPC1-205ENST00000587163 GUCY2CP25092 1073 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 U2AF2P26368 475 aaKnown RBP eCLIP17.79■□□□□ 0.44
NPC1-205ENST00000587163 LRPAP1P30533 357 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 GUCY2FP51841 1108 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 MLLT6P55198 1093 aaPredicted RBP17.79■□□□□ 0.44
NPC1-205ENST00000587163 MCL1Q07820 350 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 STRN3Q13033 797 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 SIM2Q14190 667 aaPredicted RBP17.79■□□□□ 0.44
NPC1-205ENST00000587163 ZBTB6Q15916 424 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 TXNDC11Q6PKC3 985 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 Q6ZS52 159 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 ARID3BQ8IVW6 561 aaPredicted RBP17.79■□□□□ 0.44
NPC1-205ENST00000587163 SPEM1Q8N4L4 309 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 TTC8Q8TAM2 541 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 CSGALNACT1Q8TDX6 532 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 MKNK1Q9BUB5 465 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 RAB34Q9BZG1 259 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 SLC27A5Q9Y2P5 690 aa17.79■□□□□ 0.44
NPC1-205ENST00000587163 ACACBO00763 2458 aa17.78■□□□□ 0.44
NPC1-205ENST00000587163 TTC26A0AVF1 554 aa17.78■□□□□ 0.44
NPC1-205ENST00000587163 K7ESF4 209 aa17.78■□□□□ 0.44
NPC1-205ENST00000587163 CLDN3O15551 220 aa17.78■□□□□ 0.44
NPC1-205ENST00000587163 PLS3P13797 630 aa17.78■□□□□ 0.44
NPC1-205ENST00000587163 TNFSF9P41273 254 aa17.78■□□□□ 0.44
NPC1-205ENST00000587163 AARSP49588 968 aaKnown RBP eCLIP17.78■□□□□ 0.44
NPC1-205ENST00000587163 EPHB3P54753 998 aa17.78■□□□□ 0.44
NPC1-205ENST00000587163 FCHO2Q0JRZ9 810 aa17.78■□□□□ 0.44
NPC1-205ENST00000587163 GPR17Q13304 367 aa17.78■□□□□ 0.44
NPC1-205ENST00000587163 ZRSR1Q15695 479 aaKnown RBP17.78■□□□□ 0.44
NPC1-205ENST00000587163 CENPPQ6IPU0 288 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms