RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 SEZ6LQ9BYH1 1024 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 CELF4Q9BZC1 486 aaKnown RBP10.93□□□□□ -0.66
APOC1-201ENST00000586638 TSGA10Q9BZW7 698 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 HIPK3Q9H422 1215 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 NXF3Q9H4D5 531 aaKnown RBP10.93□□□□□ -0.66
APOC1-201ENST00000586638 SEPT11Q9NVA2 429 aaKnown RBP10.93□□□□□ -0.66
APOC1-201ENST00000586638 CXXC1Q9P0U4 656 aaPredicted RBP10.93□□□□□ -0.66
APOC1-201ENST00000586638 ADAMTS1Q9UHI8 967 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 NOC2LQ9Y3T9 749 aaKnown RBP10.93□□□□□ -0.66
APOC1-201ENST00000586638 PAXBP1Q9Y5B6 917 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 BZW2Q9Y6E2 419 aaKnown RBP10.93□□□□□ -0.66
APOC1-201ENST00000586638 RIOK3O14730 519 aaKnown RBP10.92□□□□□ -0.66
APOC1-201ENST00000586638 PJA2O43164 708 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 CYP26A1O43174 497 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 KRT86O43790 486 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 MOCS3O95396 460 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 ANXA13P27216 316 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 HOXD11P31277 338 aaPredicted RBP10.92□□□□□ -0.66
APOC1-201ENST00000586638 CASQ1P31415 396 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 GCNT1Q02742 428 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 MGAT3Q09327 533 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 TMEM132DQ14C87 1099 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 ZNF699Q32M78 642 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 SLC10A6Q3KNW5 377 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 UBXN11Q5T124 520 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 TAF3Q5VWG9 929 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 ZNF662Q6ZS27 426 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 APBB1IPQ7Z5R6 666 aaPredicted RBP10.92□□□□□ -0.66
APOC1-201ENST00000586638 NOP9Q86U38 636 aaKnown RBP10.92□□□□□ -0.66
APOC1-201ENST00000586638 VPS36Q86VN1 386 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 SESTD1Q86VW0 696 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 PALB2Q86YC2 1186 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 FMNL3Q8IVF7 1028 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 GLYCTKQ8IVS8 523 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 FAM71AQ8IYT1 594 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 NME8Q8N427 588 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 EPS8L1Q8TE68 723 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 SNX27Q96L92 541 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 ACAP3Q96P50 834 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 AGPAT1Q99943 283 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 CCDC94Q9BW85 323 aaPredicted RBP10.92□□□□□ -0.66
APOC1-201ENST00000586638 IMPG2Q9BZV3 1241 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 TRPV6Q9H1D0 765 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 CXCL16Q9H2A7 254 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 ACP6Q9NPH0 428 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 SNTG2Q9NY99 539 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 SIX4Q9UIU6 781 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 NOCTQ9UK39 431 aaKnown RBP10.92□□□□□ -0.66
APOC1-201ENST00000586638 HES2Q9Y543 173 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 NUB1Q9Y5A7 615 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 SLC4A7Q9Y6M7 1214 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 DUSP10Q9Y6W6 482 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 BDP1A6H8Y1 2624 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 SCN1AP35498 2009 aa10.92□□□□□ -0.66
APOC1-201ENST00000586638 RECQL4O94761 1208 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 ASS1P00966 412 aaKnown RBP10.91□□□□□ -0.66
APOC1-201ENST00000586638 CST3P01034 146 aaPredicted RBP10.91□□□□□ -0.66
APOC1-201ENST00000586638 TUBB4AP04350 444 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 KRT19P08727 400 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 CCDC172P0C7W6 258 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 AXLP30530 894 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 PDE6CP51160 858 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 RABGGTBP53611 331 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 KIF5AQ12840 1032 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 TRPC3Q13507 836 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 CUL2Q13617 745 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 BMS1Q14692 1282 aaKnown RBP10.91□□□□□ -0.66
APOC1-201ENST00000586638 PCBP1Q15365 356 aaKnown RBP eCLIP10.91□□□□□ -0.665e-16■■■■■ 49.4
APOC1-201ENST00000586638 PTGISQ16647 500 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 KYAT1Q16773 422 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 DUOXA2Q1HG44 320 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 ENOSF1Q7L5Y1 443 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 RSPH3Q86UC2 560 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 SLC47A2Q86VL8 602 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 UBR7Q8N806 425 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 C1orf127Q8N9H9 656 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 SECISBP2LQ93073 1101 aaKnown RBP10.91□□□□□ -0.66
APOC1-201ENST00000586638 KIF12Q96FN5 646 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 TRIM6Q9C030 488 aaPredicted RBP10.91□□□□□ -0.66
APOC1-201ENST00000586638 NIF3L1Q9GZT8 377 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 TRMT13Q9NUP7 481 aaKnown RBP10.91□□□□□ -0.66
APOC1-201ENST00000586638 TAS2R14Q9NYV8 317 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 RAPGEFL1Q9UHV5 662 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 NAGPAQ9UK23 515 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 POLIQ9UNA4 740 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 YBX2Q9Y2T7 364 aaKnown RBP10.91□□□□□ -0.66
APOC1-201ENST00000586638 CAPN6Q9Y6Q1 641 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 CACNA1AO00555 2505 aa10.91□□□□□ -0.66
APOC1-201ENST00000586638 TANC1Q9C0D5 1861 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 TMCO5BA8MYB1 307 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 BUB1O43683 1085 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 CHRNA1P02708 482 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 ITGB3P05106 788 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 MMEP08473 750 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 CYP11B1P15538 503 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 CHRNB2P17787 502 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 ACO1P21399 889 aaKnown RBP10.9□□□□□ -0.66
APOC1-201ENST00000586638 TNFAIP3P21580 790 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 TBXAS1P24557 533 aaPredicted RBP10.9□□□□□ -0.66
APOC1-201ENST00000586638 POLR2BP30876 1174 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms