RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 FAM3CQ92520 227 aa21.9■■□□□ 1.1
CLPTM1-204ENST00000585961 CRISPLD1Q9H336 500 aa21.9■■□□□ 1.1
CLPTM1-204ENST00000585961 SLITRK6Q9H5Y7 841 aa21.9■■□□□ 1.1
CLPTM1-204ENST00000585961 ASAH2Q9NR71 780 aa21.9■■□□□ 1.1
CLPTM1-204ENST00000585961 KCNG1Q9UIX4 513 aa21.9■■□□□ 1.1
CLPTM1-204ENST00000585961 GPR179Q6PRD1 2367 aa21.89■■□□□ 1.1
CLPTM1-204ENST00000585961 TTC26A0AVF1 554 aa21.89■■□□□ 1.09
CLPTM1-204ENST00000585961 ZNF263O14978 683 aa21.89■■□□□ 1.09
CLPTM1-204ENST00000585961 VNN2O95498 520 aa21.89■■□□□ 1.09
CLPTM1-204ENST00000585961 PSMC3P17980 439 aa21.89■■□□□ 1.09
CLPTM1-204ENST00000585961 MAGEA9P43362 315 aa21.89■■□□□ 1.09
CLPTM1-204ENST00000585961 ATP2C1P98194 919 aaPredicted RBP21.89■■□□□ 1.09
CLPTM1-204ENST00000585961 ZBTB6Q15916 424 aa21.89■■□□□ 1.09
CLPTM1-204ENST00000585961 HAUS6Q7Z4H7 955 aa21.89■■□□□ 1.09
CLPTM1-204ENST00000585961 USP37Q86T82 979 aa21.89■■□□□ 1.09
CLPTM1-204ENST00000585961 SHKBP1Q8TBC3 707 aa21.89■■□□□ 1.09
CLPTM1-204ENST00000585961 IRF7Q92985 503 aa21.89■■□□□ 1.09
CLPTM1-204ENST00000585961 PLEKHA5Q9HAU0 1116 aa21.89■■□□□ 1.09
CLPTM1-204ENST00000585961 PCDHGA2Q9Y5H1 932 aa21.89■■□□□ 1.09
CLPTM1-204ENST00000585961 A0A1W2PRU2 124 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 HEPACAM2A8MVW5 462 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 M0QZQ0 153 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 MAN2B1O00754 1011 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 PPEF2O14830 753 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 SOAT2O75908 522 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 OAZ2O95190 189 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 RPS9P46781 194 aaKnown RBP21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 PUM1Q14671 1186 aaKnown RBP eCLIP21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 RILPL1Q5EBL4 403 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 ZNF687Q8N1G0 1237 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 MYCT1Q8N699 235 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 ZBTB44Q8NCP5 570 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 TTC8Q8TAM2 541 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 DNASE1L2Q92874 299 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 TMEM209Q96SK2 561 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 ZHX3Q9H4I2 956 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 YIPF1Q9Y548 306 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 PIAS3Q9Y6X2 628 aa21.88■■□□□ 1.09
CLPTM1-204ENST00000585961 NCANO14594 1321 aa21.87■■□□□ 1.09
CLPTM1-204ENST00000585961 H3BQV1 296 aa21.87■■□□□ 1.09
CLPTM1-204ENST00000585961 TULP1O00294 542 aaPredicted RBP21.87■■□□□ 1.09
CLPTM1-204ENST00000585961 CCNE1P24864 410 aa21.87■■□□□ 1.09
CLPTM1-204ENST00000585961 LIG4P49917 911 aa21.87■■□□□ 1.09
CLPTM1-204ENST00000585961 ENOX2Q16206 610 aaKnown RBP21.87■■□□□ 1.09
CLPTM1-204ENST00000585961 LPAL2Q16609 132 aa21.87■■□□□ 1.09
CLPTM1-204ENST00000585961 ERICH6BQ5W0A0 696 aa21.87■■□□□ 1.09
CLPTM1-204ENST00000585961 MFSD6LQ8IWD5 586 aa21.87■■□□□ 1.09
CLPTM1-204ENST00000585961 ATAD1Q8NBU5 361 aa21.87■■□□□ 1.09
CLPTM1-204ENST00000585961 RSPRY1Q96DX4 576 aa21.87■■□□□ 1.09
CLPTM1-204ENST00000585961 RPF1Q9H9Y2 349 aaKnown RBP21.87■■□□□ 1.09
CLPTM1-204ENST00000585961 LARSQ9P2J5 1176 aaKnown RBP21.87■■□□□ 1.09
CLPTM1-204ENST00000585961 MIA3Q5JRA6 1907 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 SPTLC1O15269 473 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 LRPAP1P30533 357 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 ALDH1A3P47895 512 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 EPHB3P54753 998 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 PPP2R3AQ06190 1150 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 TMEM119Q4V9L6 283 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 STXBP5Q5T5C0 1151 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 GPBP1Q86WP2 473 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 TTC9BQ8N6N2 239 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 LRRC15Q8TF66 581 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 LRRC3Q9BY71 257 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 DNAJC25Q9H1X3 360 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 MAFFQ9ULX9 164 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 TBX20Q9UMR3 447 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 UBQLN1Q9UMX0 589 aaKnown RBP21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 SMG5Q9UPR3 1016 aaKnown RBP21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 OTOGLQ3ZCN5 2332 aa21.86■■□□□ 1.09
CLPTM1-204ENST00000585961 LILRB5O75023 590 aa21.85■■□□□ 1.09
CLPTM1-204ENST00000585961 GJB2P29033 226 aa21.85■■□□□ 1.09
CLPTM1-204ENST00000585961 EPHA5P54756 1037 aa21.85■■□□□ 1.09
CLPTM1-204ENST00000585961 NCKAP1LP55160 1127 aa21.85■■□□□ 1.09
CLPTM1-204ENST00000585961 MCM6Q14566 821 aa21.85■■□□□ 1.09
CLPTM1-204ENST00000585961 OVOS1Q6IE37 1185 aa21.85■■□□□ 1.09
CLPTM1-204ENST00000585961 JADE1Q6IE81 842 aa21.85■■□□□ 1.09
CLPTM1-204ENST00000585961 DNAJB7Q7Z6W7 309 aaPredicted RBP21.85■■□□□ 1.09
CLPTM1-204ENST00000585961 YAF2Q8IY57 180 aa21.85■■□□□ 1.09
CLPTM1-204ENST00000585961 BEST2Q8NFU1 509 aa21.85■■□□□ 1.09
CLPTM1-204ENST00000585961 NELL1Q92832 810 aa21.85■■□□□ 1.09
CLPTM1-204ENST00000585961 REEP2Q9BRK0 252 aa21.85■■□□□ 1.09
CLPTM1-204ENST00000585961 PRMT8Q9NR22 394 aaPredicted RBP21.85■■□□□ 1.09
CLPTM1-204ENST00000585961 OGTO15294 1046 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 FAM13AO94988 1023 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 CYP3A5P20815 502 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 SOX9P48436 509 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 KPNA1P52294 538 aaPredicted RBP21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 GPR17Q13304 367 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 CENPPQ6IPU0 288 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 TMC8Q8IU68 726 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 ARID3BQ8IVW6 561 aaPredicted RBP21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 CSGALNACT1Q8TDX6 532 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 BORCS6Q96GS4 357 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 TMX3Q96JJ7 454 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 SENP8Q96LD8 212 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 LRRC3BQ96PB8 259 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 CHRDQ9H2X0 955 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 TRPV4Q9HBA0 871 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 RBM12Q9NTZ6 932 aaKnown RBP21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 DLL3Q9NYJ7 618 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms