RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 LAMA5O15230 3695 aa19.87■□□□□ 0.77
TOP3A-220ENST00000585031 TMEM8BA6NDV4 472 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 PODXLO00592 558 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 CHADO15335 359 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 MED24O75448 989 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 TOP3BO95985 862 aaKnown RBP19.86■□□□□ 0.77
TOP3A-220ENST00000585031 PSMA5P28066 241 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 TXKP42681 527 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 KPNA1P52294 538 aaPredicted RBP19.86■□□□□ 0.77
TOP3A-220ENST00000585031 DGKKQ5KSL6 1271 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 TPGS2Q68CL5 300 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 TCEAL6Q6IPX3 200 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 CACNA2D4Q7Z3S7 1137 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 CATSPER3Q86XQ3 398 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 TMC8Q8IU68 726 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 TCEAL3Q969E4 200 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 C18orf25Q96B23 403 aaPredicted RBP19.86■□□□□ 0.77
TOP3A-220ENST00000585031 MTMR9Q96QG7 549 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 C2orf40Q9H1Z8 148 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 CRISPLD1Q9H336 500 aa19.86■□□□□ 0.77
TOP3A-220ENST00000585031 C8orf33Q9H7E9 229 aaPredicted RBP19.86■□□□□ 0.77
TOP3A-220ENST00000585031 RBM19Q9Y4C8 960 aaKnown RBP19.86■□□□□ 0.77
TOP3A-220ENST00000585031 SRRM3A6NNA2 597 aaPredicted RBP19.85■□□□□ 0.77
TOP3A-220ENST00000585031 SPINK2P20155 84 aa19.85■□□□□ 0.77
TOP3A-220ENST00000585031 SCRN1Q12765 414 aa19.85■□□□□ 0.77
TOP3A-220ENST00000585031 CALCRLQ16602 461 aa19.85■□□□□ 0.77
TOP3A-220ENST00000585031 DCAF4L1Q3SXM0 396 aa19.85■□□□□ 0.77
TOP3A-220ENST00000585031 CTXN3Q4LDR2 81 aa19.85■□□□□ 0.77
TOP3A-220ENST00000585031 MCPH1Q8NEM0 835 aa19.85■□□□□ 0.77
TOP3A-220ENST00000585031 GAB3Q8WWW8 586 aa19.85■□□□□ 0.77
TOP3A-220ENST00000585031 NAP1L4Q99733 375 aaKnown RBP19.85■□□□□ 0.77
TOP3A-220ENST00000585031 DNAJC25Q9H1X3 360 aa19.85■□□□□ 0.77
TOP3A-220ENST00000585031 AFF4Q9UHB7 1163 aaKnown RBP19.85■□□□□ 0.77
TOP3A-220ENST00000585031 PCDHGA5Q9Y5G8 931 aa19.85■□□□□ 0.77
TOP3A-220ENST00000585031 ABCA7Q8IZY2 2146 aa19.84■□□□□ 0.77
TOP3A-220ENST00000585031 CCDC163A0A0D9SF12 145 aa19.84■□□□□ 0.77
TOP3A-220ENST00000585031 A0A1W2PRU2 124 aa19.84■□□□□ 0.77
TOP3A-220ENST00000585031 SYN3O14994 580 aa19.84■□□□□ 0.77
TOP3A-220ENST00000585031 CTDNEP1O95476 244 aa19.84■□□□□ 0.77
TOP3A-220ENST00000585031 OSTNP61366 133 aa19.84■□□□□ 0.77
TOP3A-220ENST00000585031 TNK2Q07912 1038 aa19.84■□□□□ 0.77
TOP3A-220ENST00000585031 ATF7IP2Q5U623 682 aa19.84■□□□□ 0.77
TOP3A-220ENST00000585031 IQCEQ6IPM2 695 aa19.84■□□□□ 0.77
TOP3A-220ENST00000585031 ARID3BQ8IVW6 561 aaPredicted RBP19.84■□□□□ 0.77
TOP3A-220ENST00000585031 GATA6Q92908 595 aa19.84■□□□□ 0.77
TOP3A-220ENST00000585031 COL26A1Q96A83 441 aa19.84■□□□□ 0.77
TOP3A-220ENST00000585031 TMEM60Q9H2L4 133 aa19.84■□□□□ 0.77
TOP3A-220ENST00000585031 ASAH2Q9NR71 780 aa19.84■□□□□ 0.77
TOP3A-220ENST00000585031 NUP205Q92621 2012 aa19.84■□□□□ 0.77
TOP3A-220ENST00000585031 ITPR1Q14643 2758 aa19.83■□□□□ 0.77
TOP3A-220ENST00000585031 NAMPTP43490 491 aa19.83■□□□□ 0.77
TOP3A-220ENST00000585031 RALGPS2Q86X27 583 aaPredicted RBP19.83■□□□□ 0.77
TOP3A-220ENST00000585031 ELMOD1Q8N336 334 aa19.83■□□□□ 0.77
TOP3A-220ENST00000585031 SYNPOQ8N3V7 929 aa19.83■□□□□ 0.77
TOP3A-220ENST00000585031 E2F7Q96AV8 911 aa19.83■□□□□ 0.77
TOP3A-220ENST00000585031 ZC3H10Q96K80 434 aaKnown RBP19.83■□□□□ 0.77
TOP3A-220ENST00000585031 CDT1Q9H211 546 aa19.83■□□□□ 0.77
TOP3A-220ENST00000585031 SLITRK6Q9H5Y7 841 aa19.83■□□□□ 0.77
TOP3A-220ENST00000585031 YIPF1Q9Y548 306 aa19.83■□□□□ 0.77
TOP3A-220ENST00000585031 ANK1P16157 1881 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 H7C4K7 107 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 RPP40O75818 363 aaKnown RBP19.82■□□□□ 0.76
TOP3A-220ENST00000585031 OR4Q2P0C623 313 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 CYP11B2P19099 503 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 CACNB1Q02641 598 aaPredicted RBP19.82■□□□□ 0.76
TOP3A-220ENST00000585031 RING1Q06587 406 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 RNF43Q68DV7 783 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 PADI6Q6TGC4 694 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 GAREM2Q75VX8 874 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 YAF2Q8IY57 180 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 BEST2Q8NFU1 509 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 DEPTORQ8TB45 409 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 CHFRQ96EP1 664 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 SUSD3Q96L08 255 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 ADAM33Q9BZ11 813 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 PTPRHQ9HD43 1115 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 VPS45Q9NRW7 570 aa19.82■□□□□ 0.76
TOP3A-220ENST00000585031 FDPSP14324 419 aaKnown RBP19.81■□□□□ 0.76
TOP3A-220ENST00000585031 MPLP40238 635 aa19.81■□□□□ 0.76
TOP3A-220ENST00000585031 GRM5P41594 1212 aa19.81■□□□□ 0.76
TOP3A-220ENST00000585031 NOVA1P51513 510 aaKnown RBP19.81■□□□□ 0.76
TOP3A-220ENST00000585031 DDX12PQ92771 950 aa19.81■□□□□ 0.76
TOP3A-220ENST00000585031 TBC1D32Q96NH3 1257 aa19.81■□□□□ 0.76
TOP3A-220ENST00000585031 BACH2Q9BYV9 841 aa19.81■□□□□ 0.76
TOP3A-220ENST00000585031 TNFSF13BQ9Y275 285 aa19.81■□□□□ 0.76
TOP3A-220ENST00000585031 FREM2Q5SZK8 3169 aa19.81■□□□□ 0.76
TOP3A-220ENST00000585031 SETXQ7Z333 2677 aaKnown RBP19.8■□□□□ 0.76
TOP3A-220ENST00000585031 DENND4CQ5VZ89 1909 aa19.8■□□□□ 0.76
TOP3A-220ENST00000585031 STK36Q9NRP7 1315 aa19.8■□□□□ 0.76
TOP3A-220ENST00000585031 LOC400499M0QZD8 3231 aa19.8■□□□□ 0.76
TOP3A-220ENST00000585031 MYO16Q9Y6X6 1858 aa19.8■□□□□ 0.76
TOP3A-220ENST00000585031 PRAMEF12O95522 483 aa19.8■□□□□ 0.76
TOP3A-220ENST00000585031 FOXC1Q12948 553 aa19.8■□□□□ 0.76
TOP3A-220ENST00000585031 ECM1Q16610 540 aa19.8■□□□□ 0.76
TOP3A-220ENST00000585031 CPLX2Q6PUV4 134 aaKnown RBP19.8■□□□□ 0.76
TOP3A-220ENST00000585031 TAS1R3Q7RTX0 852 aa19.8■□□□□ 0.76
TOP3A-220ENST00000585031 LEMD2Q8NC56 503 aa19.8■□□□□ 0.76
TOP3A-220ENST00000585031 PGLYRP2Q96PD5 576 aa19.8■□□□□ 0.76
TOP3A-220ENST00000585031 ACO2Q99798 780 aaKnown RBP19.8■□□□□ 0.76
TOP3A-220ENST00000585031 GPR88Q9GZN0 384 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms