RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SNX29Q8TEQ0 813 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 E2F7Q96AV8 911 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 MSANTD3Q96H12 275 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 TMX3Q96JJ7 454 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 DRC1Q96MC2 740 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 GPR88Q9GZN0 384 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 PCDHB8Q9UN66 801 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 DNM3Q9UQ16 869 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 CHD8Q9HCK8 2581 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 HEPACAM2A8MVW5 462 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 E9PMD0 336 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 CD2BP2O95400 341 aaKnown RBP14.8□□□□□ -0.04
SS18-222ENST00000582792 RETP07949 1114 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 HARSP12081 509 aaKnown RBP14.8□□□□□ -0.04
SS18-222ENST00000582792 CCNE1P24864 410 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 CXCL12P48061 93 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 HMGN5P82970 282 aaKnown RBP14.8□□□□□ -0.04
SS18-222ENST00000582792 SATB1Q01826 763 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 GAS6Q14393 721 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 TEAD2Q15562 447 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 SLC10A6Q3KNW5 377 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 C1orf228Q6PIY5 440 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 IGSF22Q8N9C0 903 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 BEST2Q8NFU1 509 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 SHKBP1Q8TBC3 707 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 ZBTB45Q96K62 511 aaPredicted RBP14.8□□□□□ -0.04
SS18-222ENST00000582792 RUSC1Q9BVN2 902 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 C17orf75Q9HAS0 396 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 YIPF1Q9Y548 306 aa14.8□□□□□ -0.04
SS18-222ENST00000582792 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.8□□□□□ -0.04
SS18-222ENST00000582792 SLC16A4O15374 487 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 TOM1L1O75674 476 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 KRT37O76014 449 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 MARCKSP29966 332 aaPredicted RBP14.79□□□□□ -0.04
SS18-222ENST00000582792 YWHAHQ04917 246 aaPredicted RBP14.79□□□□□ -0.04
SS18-222ENST00000582792 PTGDRQ13258 359 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 NBR1Q14596 966 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 NOLC1Q14978 699 aaKnown RBP eCLIP14.79□□□□□ -0.04
SS18-222ENST00000582792 RINT1Q6NUQ1 792 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 PRR23BQ6ZRT6 265 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 CCDC83Q8IWF9 413 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 SPEM1Q8N4L4 309 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 FBXO18Q8NFZ0 1043 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 NETO1Q8TDF5 533 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 CSGALNACT1Q8TDX6 532 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 RSPRY1Q96DX4 576 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 NTPCRQ9BSD7 190 aaKnown RBP14.79□□□□□ -0.04
SS18-222ENST00000582792 LRRC3Q9BY71 257 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 OXCT2Q9BYC2 517 aaPredicted RBP14.79□□□□□ -0.04
SS18-222ENST00000582792 RAB34Q9BZG1 259 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 SLITRK6Q9H5Y7 841 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 TUBGCP4Q9UGJ1 667 aa14.79□□□□□ -0.04
SS18-222ENST00000582792 NOL7Q9UMY1 257 aaKnown RBP14.79□□□□□ -0.04
SS18-222ENST00000582792 M0QZQ0 153 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 SLC30A4O14863 429 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 CHADO15335 359 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 OAZ2O95190 189 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 PAPSS2O95340 614 aaPredicted RBP14.78□□□□□ -0.04
SS18-222ENST00000582792 ADRB1P08588 477 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 CNR2P34972 360 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 FCHO2Q0JRZ9 810 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 STRN3Q13033 797 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 PLD1Q13393 1074 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 CUL4AQ13619 759 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 GNL2Q13823 731 aaKnown RBP14.78□□□□□ -0.04
SS18-222ENST00000582792 LRRC32Q14392 662 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 SEZ6Q53EL9 994 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 C1orf186Q6ZWK4 172 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 TMC8Q8IU68 726 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 YAF2Q8IY57 180 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 TIPINQ9BVW5 301 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 DNAJC25Q9H1X3 360 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 C8orf33Q9H7E9 229 aaPredicted RBP14.78□□□□□ -0.04
SS18-222ENST00000582792 SEMA4GQ9NTN9 838 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 ANKFY1Q9P2R3 1169 aa14.78□□□□□ -0.04
SS18-222ENST00000582792 A0A1W2PRU2 124 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 SFI1A8K8P3 1242 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 PP2D1A8MPX8 630 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 CHURC1-FNTBB4DL54 471 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 HRO43593 1189 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 VNN2O95498 520 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 OR4Q2P0C623 313 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 GUCY2CP25092 1073 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 LRPAP1P30533 357 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 FNTBP49356 437 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 AARSP49588 968 aaKnown RBP eCLIP14.77□□□□□ -0.05
SS18-222ENST00000582792 KPNA1P52294 538 aaPredicted RBP14.77□□□□□ -0.05
SS18-222ENST00000582792 MCL1Q07820 350 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 DMWDQ09019 674 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 SIM2Q14190 667 aaPredicted RBP14.77□□□□□ -0.05
SS18-222ENST00000582792 KRT79Q5XKE5 535 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 ZPBP2Q6X784 338 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 KCNK18Q7Z418 384 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 LONP2Q86WA8 852 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 TMEM161BQ8NDZ6 487 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 SPIRE2Q8WWL2 714 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 PGLYRP2Q96PD5 576 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 CRISPLD1Q9H336 500 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 PLEKHA5Q9HAU0 1116 aa14.77□□□□□ -0.05
SS18-222ENST00000582792 RBM12Q9NTZ6 932 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms