RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 NOX5Q96PH1 765 aa10.57□□□□□ -0.72
SNX11-206ENST00000580219 MRPL4Q9BYD3 311 aaKnown RBP10.57□□□□□ -0.72
SNX11-206ENST00000580219 UPF3AQ9H1J1 476 aaKnown RBP10.57□□□□□ -0.72
SNX11-206ENST00000580219 XPNPEP3Q9NQH7 507 aa10.57□□□□□ -0.72
SNX11-206ENST00000580219 STARD7Q9NQZ5 370 aa10.57□□□□□ -0.72
SNX11-206ENST00000580219 LMCD1Q9NZU5 365 aa10.57□□□□□ -0.72
SNX11-206ENST00000580219 TRIM10Q9UDY6 481 aa10.57□□□□□ -0.72
SNX11-206ENST00000580219 AGO2Q9UKV8 859 aaKnown RBP10.57□□□□□ -0.72
SNX11-206ENST00000580219 FAM50BQ9Y247 325 aa10.57□□□□□ -0.72
SNX11-206ENST00000580219 Q9Y3F1 56 aa10.57□□□□□ -0.72
SNX11-206ENST00000580219 JRKLQ9Y4A0 524 aa10.57□□□□□ -0.72
SNX11-206ENST00000580219 SMG1Q96Q15 3661 aaKnown RBP10.56□□□□□ -0.72
SNX11-206ENST00000580219 A0A087X0T9 212 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 A0A0A6YYK5 440 aaPredicted RBP10.56□□□□□ -0.72
SNX11-206ENST00000580219 GOLGA8IPA6NC78 632 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 GOLGA8JA6NMD2 632 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 ADAMTS4O75173 837 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 TADA3O75528 432 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 TOM1L1O75674 476 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 PGK1P00558 417 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 FAM228BP0C875 321 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 PRLRP16471 622 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 MARK3P27448 753 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 AP3M2P53677 418 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 MFAP3P55082 362 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 GJA9P57773 515 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 NKX3-2P78367 333 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 NCBP1Q09161 790 aaKnown RBP10.56□□□□□ -0.72
SNX11-206ENST00000580219 SURF1Q15526 300 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 MAPK6Q16659 721 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 IFI16Q16666 785 aaKnown RBP10.56□□□□□ -0.72
SNX11-206ENST00000580219 PHLDB3Q6NSJ2 640 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 C15orf39Q6ZRI6 1047 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 TRAPPC11Q7Z392 1133 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 RNF180Q86T96 592 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 TRIM50Q86XT4 487 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 KIAA2013Q8IYS2 634 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 FBXL13Q8NEE6 735 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 AFG1LQ8WV93 481 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 CALR3Q96L12 384 aaKnown RBP10.56□□□□□ -0.72
SNX11-206ENST00000580219 MAP7D2Q96T17 732 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 FAM213AQ9BRX8 229 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 SYT11Q9BT88 431 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.56□□□□□ -0.72
SNX11-206ENST00000580219 CARD6Q9BX69 1037 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 GPR88Q9GZN0 384 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 AP5M1Q9H0R1 490 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 SUCLA2Q9P2R7 463 aaPredicted RBP10.56□□□□□ -0.72
SNX11-206ENST00000580219 ADAMTS1Q9UHI8 967 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 NAGPAQ9UK23 515 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 AJAP1Q9UKB5 411 aaPredicted RBP10.56□□□□□ -0.72
SNX11-206ENST00000580219 VPS9D1Q9Y2B5 631 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 PTPRSQ13332 1948 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 MROH7Q68CQ1 1323 aa10.56□□□□□ -0.72
SNX11-206ENST00000580219 NBEAQ8NFP9 2946 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 MYADML2A6NDP7 307 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 A6NJR5 290 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 ZIC2O95409 532 aaPredicted RBP10.55□□□□□ -0.72
SNX11-206ENST00000580219 C22orf31O95567 290 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 PRKCBP05771 671 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 MMP3P08254 477 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 POU5F1Q01860 360 aaKnown RBP10.55□□□□□ -0.72
SNX11-206ENST00000580219 ARID5AQ03989 594 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 CKAP4Q07065 602 aaKnown RBP10.55□□□□□ -0.72
SNX11-206ENST00000580219 FAM187BQ17R55 369 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 ZACNQ401N2 412 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 ALKBH5Q6P6C2 394 aaKnown RBP10.55□□□□□ -0.72
SNX11-206ENST00000580219 GJB7Q6PEY0 223 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 SV2AQ7L0J3 742 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 SRGAP1Q7Z6B7 1085 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 LINC01465Q8N7H1 131 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 ZSWIM2Q8NEG5 633 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 SLC30A5Q8TAD4 765 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 UBXN4Q92575 508 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 DHX38Q92620 1227 aaKnown RBP10.55□□□□□ -0.72
SNX11-206ENST00000580219 CCDC127Q96BQ5 260 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 RPGRIP1Q96KN7 1286 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 NT5C1BQ96P26 610 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 FNBP1Q96RU3 617 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 ZBED2Q9BTP6 218 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 MSTO1Q9BUK6 570 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 TARS2Q9BW92 718 aaKnown RBP10.55□□□□□ -0.72
SNX11-206ENST00000580219 SLC4A5Q9BY07 1137 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 FZD8Q9H461 694 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 UBE2TQ9NPD8 197 aaPredicted RBP10.55□□□□□ -0.72
SNX11-206ENST00000580219 RAB20Q9NX57 234 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 DLL3Q9NYJ7 618 aa10.55□□□□□ -0.72
SNX11-206ENST00000580219 MACROD2A1Z1Q3 448 aa10.54□□□□□ -0.72
SNX11-206ENST00000580219 DDX3XO00571 662 aaKnown RBP eCLIP10.54□□□□□ -0.72
SNX11-206ENST00000580219 ACKR2O00590 384 aa10.54□□□□□ -0.72
SNX11-206ENST00000580219 CLDN3O15551 220 aa10.54□□□□□ -0.72
SNX11-206ENST00000580219 H2AFZP0C0S5 128 aa10.54□□□□□ -0.72
SNX11-206ENST00000580219 C6orf222P0C671 652 aaPredicted RBP10.54□□□□□ -0.72
SNX11-206ENST00000580219 TCP1P17987 556 aaKnown RBP10.54□□□□□ -0.72
SNX11-206ENST00000580219 PROZP22891 400 aa10.54□□□□□ -0.72
SNX11-206ENST00000580219 TMOD1P28289 359 aa10.54□□□□□ -0.72
SNX11-206ENST00000580219 CST5P28325 142 aaPredicted RBP10.54□□□□□ -0.72
SNX11-206ENST00000580219 PHKA2P46019 1235 aa10.54□□□□□ -0.72
SNX11-206ENST00000580219 CPT1AP50416 773 aa10.54□□□□□ -0.72
SNX11-206ENST00000580219 PTENP60484 403 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms