RNA–Protein interactions for RNA: ENST00000579139.1

EIF4A1-213, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 4

Gene EIF4A1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-213ENST00000579139 PRG3Q9Y2Y8 225 aaPredicted RBP12.8□□□□□ -0.36
EIF4A1-213ENST00000579139 INSL6Q9Y581 213 aa12.8□□□□□ -0.36
EIF4A1-213ENST00000579139 NUB1Q9Y5A7 615 aa12.8□□□□□ -0.36
EIF4A1-213ENST00000579139 PLXNA3P51805 1871 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 GTPBP10A4D1E9 387 aaKnown RBP12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 ASS1P00966 412 aaKnown RBP12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 KRT19P08727 400 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 HOXD11P31277 338 aaPredicted RBP12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 PIK3CAP42336 1068 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 AP3M2P53677 418 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 LILRA4P59901 499 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 LRMPQ12912 555 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 SYCP1Q15431 976 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 TIGD5Q53EQ6 642 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 PHLDB3Q6NSJ2 640 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 TAS1R1Q7RTX1 841 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 COLGALT1Q8NBJ5 622 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 FBXL13Q8NEE6 735 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 CLP1Q92989 425 aaKnown RBP12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 ASB2Q96Q27 587 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 ERGIC2Q96RQ1 377 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 UHRF1Q96T88 793 aaPredicted RBP12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 PBX4Q9BYU1 374 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 INTS2Q9H0H0 1204 aaKnown RBP12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 SDCBP2Q9H190 292 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 GANQ9H2C0 597 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 SLC38A7Q9NVC3 462 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 KANSL3Q9P2N6 904 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 NME7Q9Y5B8 376 aa12.79□□□□□ -0.36
EIF4A1-213ENST00000579139 RNF225M0QZC1 329 aaPredicted RBP12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 PES1O00541 588 aaKnown RBP12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 P4HA2O15460 535 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 STX10O60499 249 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 PHACTR2O75167 634 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 CA3P07451 260 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 AARSP49588 968 aaKnown RBP eCLIP12.78□□□□□ -0.367e-6■■□□□ 13.7
EIF4A1-213ENST00000579139 ZNF75DP51815 510 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 TPM4P67936 248 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 RBP5P82980 135 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 PLCB2Q00722 1185 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 UBXN1Q04323 297 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 GSE1Q14687 1217 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 TRIM65Q6PJ69 517 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 KCNT2Q6UVM3 1135 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 SLC39A11Q8N1S5 342 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 FIBCD1Q8N539 461 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 HPDLQ96IR7 371 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 KREMEN1Q96MU8 473 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 ARID3AQ99856 593 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 C17orf80Q9BSJ5 609 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 LSM14BQ9BX40 385 aaKnown RBP12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 MRPL9Q9BYD2 267 aaKnown RBP12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 ZNF576Q9H609 170 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 GRPEL1Q9HAV7 217 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 GCNT4Q9P109 453 aa12.78□□□□□ -0.36
EIF4A1-213ENST00000579139 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 TMEM189-UBE2V1I3L0A0 370 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 XPOTO43592 962 aaKnown RBP12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 B3GAT3O94766 335 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 DNAJB2P25686 324 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 RPL9P32969 192 aaKnown RBP12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 RAP1GAPP47736 663 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 TAP1Q03518 808 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 EXOC3L4Q17RC7 722 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 DCLRE1AQ6PJP8 1040 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 GBP6Q6ZN66 633 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 LIMS2Q7Z4I7 341 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 USP37Q86T82 979 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 LRRC52Q8N7C0 313 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 ANKRD20A12PQ8NF67 263 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 ATXN2LQ8WWM7 1075 aaKnown RBP12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 B3GALT6Q96L58 329 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 UROC1Q96N76 676 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 NECAB3Q96P71 396 aaPredicted RBP12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 FAM193BQ96PV7 902 aaPredicted RBP12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 TMEM175Q9BSA9 504 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 GPR62Q9BZJ7 368 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 NKX2-4Q9H2Z4 354 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 SMYD3Q9H7B4 428 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 VRTNQ9H8Y1 702 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 FAN1Q9Y2M0 1017 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 PCDHA11Q9Y5I1 949 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 MTCL1Q9Y4B5 1905 aaKnown RBP12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 REV3LO60673 3130 aa12.77□□□□□ -0.37
EIF4A1-213ENST00000579139 GOLGA6L3A6NEY3 463 aa12.76□□□□□ -0.37
EIF4A1-213ENST00000579139 HCRTO43612 131 aa12.76□□□□□ -0.37
EIF4A1-213ENST00000579139 N4BP1O75113 896 aaKnown RBP12.76□□□□□ -0.37
EIF4A1-213ENST00000579139 STAU1O95793 577 aaKnown RBP12.76□□□□□ -0.37
EIF4A1-213ENST00000579139 ALDH2P05091 517 aa12.76□□□□□ -0.37
EIF4A1-213ENST00000579139 PNMA6AP0CW24 399 aaPredicted RBP12.76□□□□□ -0.37
EIF4A1-213ENST00000579139 DNAJB1P25685 340 aa12.76□□□□□ -0.37
EIF4A1-213ENST00000579139 ASPAP45381 313 aa12.76□□□□□ -0.37
EIF4A1-213ENST00000579139 TAF6P49848 677 aa12.76□□□□□ -0.37
EIF4A1-213ENST00000579139 CDH8P55286 799 aa12.76□□□□□ -0.37
EIF4A1-213ENST00000579139 NOP14P78316 857 aaKnown RBP12.76□□□□□ -0.37
EIF4A1-213ENST00000579139 MRPS5P82675 430 aaKnown RBP12.76□□□□□ -0.37
EIF4A1-213ENST00000579139 TRPC3Q13507 836 aa12.76□□□□□ -0.37
EIF4A1-213ENST00000579139 SOWAHAQ2M3V2 549 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms