RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 DNAJC25Q9H1X3 360 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 CRISPLD1Q9H336 500 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 ASAH2Q9NR71 780 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 EBF1Q9UH73 591 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 MYLKQ15746 1914 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 ZMYM2Q9UBW7 1377 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 MYOFQ9NZM1 2061 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 NBPF19A0A087WUL8 3843 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 TK2O00142 265 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 EDN1P05305 212 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 ARSAP15289 507 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 SOX4Q06945 474 aaPredicted RBP12.25□□□□□ -0.45
GGA3-206ENST00000578773 LMAN2Q12907 356 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 ELAVL2Q12926 359 aaKnown RBP12.25□□□□□ -0.45
GGA3-206ENST00000578773 ANO7Q6IWH7 933 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 SLC27A1Q6PCB7 646 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 RNF19BQ6ZMZ0 732 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 GAREM2Q75VX8 874 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 CCDC136Q96JN2 1154 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 CEP170P1Q96L14 293 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 ZNF512Q96ME7 567 aaPredicted RBP12.25□□□□□ -0.45
GGA3-206ENST00000578773 FNBP1Q96RU3 617 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 RIT2Q99578 217 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 NUSAP1Q9BXS6 441 aaKnown RBP12.25□□□□□ -0.45
GGA3-206ENST00000578773 EBF3Q9H4W6 596 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 ZBTB47Q9UFB7 747 aaPredicted RBP12.25□□□□□ -0.45
GGA3-206ENST00000578773 FBXL5Q9UKA1 691 aa12.25□□□□□ -0.45
GGA3-206ENST00000578773 TRDMT1O14717 391 aaKnown RBP12.24□□□□□ -0.45
GGA3-206ENST00000578773 ATG13O75143 517 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 B3GAT3O94766 335 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 TDP2O95551 362 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 CFIP05156 583 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 THP07101 528 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 ITPKAP23677 461 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 GALK1P51570 392 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 CYP4F8P98187 520 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 GRSF1Q12849 480 aaKnown RBP eCLIP12.24□□□□□ -0.45
GGA3-206ENST00000578773 TRIP6Q15654 476 aaKnown RBP12.24□□□□□ -0.45
GGA3-206ENST00000578773 IQCEQ6IPM2 695 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 CASC1Q6TDU7 716 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 ANKS3Q6ZW76 656 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 SYT13Q7L8C5 426 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 MINDY1Q8N5J2 469 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 DEFB119Q8N690 84 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 MDGA1Q8NFP4 955 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 SLC7A3Q8WY07 619 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 PRORYQ9H606 182 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 CLMPQ9H6B4 373 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 GKN1Q9NS71 199 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 YIPF1Q9Y548 306 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 SLC12A7Q9Y666 1083 aa12.24□□□□□ -0.45
GGA3-206ENST00000578773 ANAPC1Q9H1A4 1944 aa12.23□□□□□ -0.45
GGA3-206ENST00000578773 TMEM189-UBE2V1I3L0A0 370 aa12.23□□□□□ -0.45
GGA3-206ENST00000578773 SOAT2O75908 522 aa12.23□□□□□ -0.45
GGA3-206ENST00000578773 CDC27P30260 824 aa12.23□□□□□ -0.45
GGA3-206ENST00000578773 CDR1P51861 262 aa12.23□□□□□ -0.45
GGA3-206ENST00000578773 B4GALNT3Q6L9W6 998 aa12.23□□□□□ -0.45
GGA3-206ENST00000578773 SLC23A3Q6PIS1 610 aa12.23□□□□□ -0.45
GGA3-206ENST00000578773 NOSTRINQ8IVI9 506 aa12.23□□□□□ -0.45
GGA3-206ENST00000578773 HACE1Q8IYU2 909 aa12.23□□□□□ -0.45
GGA3-206ENST00000578773 REXO1Q8N1G1 1221 aaKnown RBP12.23□□□□□ -0.45
GGA3-206ENST00000578773 TTC9BQ8N6N2 239 aa12.23□□□□□ -0.45
GGA3-206ENST00000578773 BPIFB1Q8TDL5 484 aa12.23□□□□□ -0.45
GGA3-206ENST00000578773 E2F7Q96AV8 911 aa12.23□□□□□ -0.45
GGA3-206ENST00000578773 IGSF5Q9NSI5 407 aa12.23□□□□□ -0.45
GGA3-206ENST00000578773 BRPF3Q9ULD4 1205 aa12.23□□□□□ -0.45
GGA3-206ENST00000578773 TP53BP1Q12888 1972 aaPredicted RBP12.23□□□□□ -0.45
GGA3-206ENST00000578773 UBR5O95071 2799 aaPredicted RBP12.22□□□□□ -0.45
GGA3-206ENST00000578773 A0A1B0GUA9 196 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 FAM149AA5PLN7 773 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 HIP1O00291 1037 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 DPYSL4O14531 572 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 OR4Q2P0C623 313 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 KRT10P13645 584 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 RDXP35241 583 aaKnown RBP12.22□□□□□ -0.45
GGA3-206ENST00000578773 ABCG1P45844 678 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 PSMC5P62195 406 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 UPP1Q16831 310 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 USP39Q53GS9 565 aaKnown RBP12.22□□□□□ -0.45
GGA3-206ENST00000578773 GPR158Q5T848 1215 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 EEF1DP3Q658K8 133 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 TOGARAM2Q6ZUX3 1019 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 RASSF3Q86WH2 238 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 TTC30AQ86WT1 665 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
GGA3-206ENST00000578773 SYT12Q8IV01 421 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 ELMOD1Q8N336 334 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 HDDC3Q8N4P3 179 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 TSTD1Q8NFU3 115 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 RDM1Q8NG50 284 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 PPP1R10Q96QC0 940 aaKnown RBP12.22□□□□□ -0.45
GGA3-206ENST00000578773 FAM83CQ9BQN1 747 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 JPH2Q9BR39 696 aaPredicted RBP12.22□□□□□ -0.45
GGA3-206ENST00000578773 SEMA4CQ9C0C4 833 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 PDZD7Q9H5P4 517 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 DKK4Q9UBT3 224 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 PILRBQ9UKJ0 227 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
GGA3-206ENST00000578773 CCL26Q9Y258 94 aa12.22□□□□□ -0.45
GGA3-206ENST00000578773 GDAQ9Y2T3 454 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms