RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 GRM2Q14416 872 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 KYAT1Q16773 422 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 ARSHQ5FYA8 562 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 FAM78AQ5JUQ0 283 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 CYP4A22Q5TCH4 519 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 TSSK4Q6SA08 328 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 ZNF852Q6ZMS4 543 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 HAUS6Q7Z4H7 955 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 SECISBP2LQ93073 1101 aaKnown RBP13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 TCEAL4Q96EI5 215 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 AK8Q96MA6 479 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 ZNF512Q96ME7 567 aaPredicted RBP13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 ASB16Q96NS5 453 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 PLIN2Q99541 437 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 HAPLN2Q9GZV7 340 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 BRD9Q9H8M2 597 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 HEBP1Q9NRV9 189 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 TUBGCP4Q9UGJ1 667 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 ODF2LQ9ULJ1 636 aa13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 MRPS17Q9Y2R5 130 aaKnown RBP13.68□□□□□ -0.22
SMARCD2-207ENST00000578234 CXCL8P10145 99 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 MYL4P12829 197 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 CPB1P15086 417 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 CYP3A5P20815 502 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 TARSP26639 723 aaKnown RBP13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 EPHA5P54756 1037 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 YWHAHQ04917 246 aaPredicted RBP13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 FZD5Q13467 585 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 TMEM119Q4V9L6 283 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 FAM173BQ6P4H8 233 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 RNF19BQ6ZMZ0 732 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 SUMF1Q8NBK3 374 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 LEMD2Q8NC56 503 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 BEST2Q8NFU1 509 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 TSPAN18Q96SJ8 248 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 TRMT61BQ9BVS5 477 aaKnown RBP13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 SLITRK6Q9H5Y7 841 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 TRPV4Q9HBA0 871 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 TRPV5Q9NQA5 729 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 CEP72Q9P209 647 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 UBQLN1Q9UMX0 589 aaKnown RBP13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 F5P12259 2224 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 PATJQ8NI35 1801 aa13.67□□□□□ -0.22
SMARCD2-207ENST00000578234 NPHP3-ACAD11A0A0J9YXS1 232 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 SHISA7A6NL88 538 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 MAN2B1O00754 1011 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 SPTLC1O15269 473 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 XPOTO43592 962 aaKnown RBP13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 PIGRP01833 764 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 ADRB2P07550 413 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 AARSP49588 968 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 SPAG1Q07617 926 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 TWF1Q12792 350 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 RESTQ13127 1097 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 PKP1Q13835 747 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 RSPO4Q2I0M5 234 aaPredicted RBP13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 GPIHBP1Q8IV16 184 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 HS6ST3Q8IZP7 471 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 SMARCD2Q92925 531 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 IRF7Q92985 503 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 KIF12Q96FN5 646 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 BICD1Q96G01 975 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 GPR88Q9GZN0 384 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 ASAH2Q9NR71 780 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 USP18Q9UMW8 372 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 PCDHGA2Q9Y5H1 932 aa13.66□□□□□ -0.22
SMARCD2-207ENST00000578234 MED19A0JLT2 244 aaPredicted RBP13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 LACTBL1A8MY62 500 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 NRG2O14511 850 aaPredicted RBP13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 HNRNPDLO14979 420 aaKnown RBP13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 OGTO15294 1046 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 FAM189A1O60320 539 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 MOSPD3O75425 235 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 PSMC3P17980 439 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 PAX3P23760 479 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 TNFSF9P41273 254 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 LIG4P49917 911 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 ZNF131P52739 623 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 CACNB1Q02641 598 aaPredicted RBP13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 PPP2R3AQ06190 1150 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 PUM1Q14671 1186 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 ENOX2Q16206 610 aaKnown RBP13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 LPAL2Q16609 132 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 FOXD4L6Q3SYB3 417 aaPredicted RBP13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 FOXD4L3Q6VB84 417 aaPredicted RBP13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 BRAPQ7Z569 592 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 USP37Q86T82 979 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 MAP4K3Q8IVH8 894 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 ZNF687Q8N1G0 1237 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 ZBTB44Q8NCP5 570 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 DEPDC1BQ8WUY9 529 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 NELL1Q92832 810 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 CALML4Q96GE6 196 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 ZSWIM3Q96MP5 696 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 REEP2Q9BRK0 252 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 ZNF334Q9HCZ1 680 aaPredicted RBP13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 RAB23Q9ULC3 237 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 TBX20Q9UMR3 447 aa13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 TIMM13Q9Y5L4 95 aaPredicted RBP13.65□□□□□ -0.22
SMARCD2-207ENST00000578234 RALGAPA1Q6GYQ0 2036 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms