RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 MAP4K3Q8IVH8 894 aa23.95■■□□□ 1.42
SNF8-216ENST00000573795 ZBTB44Q8NCP5 570 aa23.95■■□□□ 1.42
SNF8-216ENST00000573795 NELL2Q99435 816 aa23.95■■□□□ 1.42
SNF8-216ENST00000573795 PRMT8Q9NR22 394 aaPredicted RBP23.95■■□□□ 1.42
SNF8-216ENST00000573795 KCNG1Q9UIX4 513 aa23.95■■□□□ 1.42
SNF8-216ENST00000573795 YIPF1Q9Y548 306 aa23.95■■□□□ 1.42
SNF8-216ENST00000573795 PPEF2O14830 753 aa23.94■■□□□ 1.42
SNF8-216ENST00000573795 SPTLC1O15269 473 aa23.94■■□□□ 1.42
SNF8-216ENST00000573795 OAZ2O95190 189 aa23.94■■□□□ 1.42
SNF8-216ENST00000573795 OR4Q2P0C623 313 aa23.94■■□□□ 1.42
SNF8-216ENST00000573795 CYP4A22Q5TCH4 519 aa23.94■■□□□ 1.42
SNF8-216ENST00000573795 TSSK4Q6SA08 328 aa23.94■■□□□ 1.42
SNF8-216ENST00000573795 HAUS6Q7Z4H7 955 aa23.94■■□□□ 1.42
SNF8-216ENST00000573795 SMARCD2Q92925 531 aa23.94■■□□□ 1.42
SNF8-216ENST00000573795 KIF12Q96FN5 646 aa23.94■■□□□ 1.42
SNF8-216ENST00000573795 ZNF512Q96ME7 567 aaPredicted RBP23.94■■□□□ 1.42
SNF8-216ENST00000573795 HINFPQ9BQA5 517 aa23.94■■□□□ 1.42
SNF8-216ENST00000573795 LRRC3Q9BY71 257 aa23.94■■□□□ 1.42
SNF8-216ENST00000573795 BRD9Q9H8M2 597 aa23.94■■□□□ 1.42
SNF8-216ENST00000573795 PCDHGA2Q9Y5H1 932 aa23.94■■□□□ 1.42
SNF8-216ENST00000573795 LACTBL1A8MY62 500 aa23.93■■□□□ 1.42
SNF8-216ENST00000573795 LILRB5O75023 590 aa23.93■■□□□ 1.42
SNF8-216ENST00000573795 CD2BP2O95400 341 aaKnown RBP23.93■■□□□ 1.42
SNF8-216ENST00000573795 MYL4P12829 197 aa23.93■■□□□ 1.42
SNF8-216ENST00000573795 CYP3A5P20815 502 aa23.93■■□□□ 1.42
SNF8-216ENST00000573795 VIPR2P41587 438 aa23.93■■□□□ 1.42
SNF8-216ENST00000573795 YWHAHQ04917 246 aaPredicted RBP23.93■■□□□ 1.42
SNF8-216ENST00000573795 ENOX2Q16206 610 aaKnown RBP23.93■■□□□ 1.42
SNF8-216ENST00000573795 ARL6IP4Q66PJ3 421 aaKnown RBP23.93■■□□□ 1.42
SNF8-216ENST00000573795 IQCEQ6IPM2 695 aa23.93■■□□□ 1.42
SNF8-216ENST00000573795 TMC8Q8IU68 726 aa23.93■■□□□ 1.42
SNF8-216ENST00000573795 ELMOD1Q8N336 334 aa23.93■■□□□ 1.42
SNF8-216ENST00000573795 SHKBP1Q8TBC3 707 aa23.93■■□□□ 1.42
SNF8-216ENST00000573795 REEP2Q9BRK0 252 aa23.93■■□□□ 1.42
SNF8-216ENST00000573795 TRMT61BQ9BVS5 477 aaKnown RBP23.93■■□□□ 1.42
SNF8-216ENST00000573795 DNAJC25Q9H1X3 360 aa23.93■■□□□ 1.42
SNF8-216ENST00000573795 TRPV4Q9HBA0 871 aa23.93■■□□□ 1.42
SNF8-216ENST00000573795 ZNF334Q9HCZ1 680 aaPredicted RBP23.93■■□□□ 1.42
SNF8-216ENST00000573795 ASAH2Q9NR71 780 aa23.93■■□□□ 1.42
SNF8-216ENST00000573795 LARSQ9P2J5 1176 aaKnown RBP23.93■■□□□ 1.42
SNF8-216ENST00000573795 UBQLN1Q9UMX0 589 aaKnown RBP23.93■■□□□ 1.42
SNF8-216ENST00000573795 PIGRP01833 764 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 ADRB2P07550 413 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 PSMC3P17980 439 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 MARCKSP29966 332 aaPredicted RBP23.92■■□□□ 1.42
SNF8-216ENST00000573795 MATR3P43243 847 aaKnown RBP eCLIP23.92■■□□□ 1.42
SNF8-216ENST00000573795 MTAPQ13126 283 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 RABEP1Q15276 862 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 TEAD2Q15562 447 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 LEMD2Q8NC56 503 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 ZSCAN18Q8TBC5 510 aaPredicted RBP23.92■■□□□ 1.42
SNF8-216ENST00000573795 RSPRY1Q96DX4 576 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 BICD1Q96G01 975 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 CDK5RAP3Q96JB5 506 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 TMX3Q96JJ7 454 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 PGLYRP2Q96PD5 576 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 TRPV5Q9NQA5 729 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 BLOC1S4Q9NUP1 217 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 ZSCAN32Q9NX65 697 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 ODF2LQ9ULJ1 636 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 MRPS17Q9Y2R5 130 aaKnown RBP23.92■■□□□ 1.42
SNF8-216ENST00000573795 KIF3AQ9Y496 699 aa23.92■■□□□ 1.42
SNF8-216ENST00000573795 ARNTLO00327 626 aa23.91■■□□□ 1.42
SNF8-216ENST00000573795 NCAM2O15394 837 aa23.91■■□□□ 1.42
SNF8-216ENST00000573795 TDGF1P13385 188 aa23.91■■□□□ 1.42
SNF8-216ENST00000573795 GJB2P29033 226 aa23.91■■□□□ 1.42
SNF8-216ENST00000573795 GDI1P31150 447 aa23.91■■□□□ 1.42
SNF8-216ENST00000573795 PPP2R3AQ06190 1150 aa23.91■■□□□ 1.42
SNF8-216ENST00000573795 SLC39A4Q6P5W5 647 aa23.91■■□□□ 1.42
SNF8-216ENST00000573795 IRF7Q92985 503 aa23.91■■□□□ 1.42
SNF8-216ENST00000573795 FIZ1Q96SL8 496 aa23.91■■□□□ 1.42
SNF8-216ENST00000573795 TBX20Q9UMR3 447 aa23.91■■□□□ 1.42
SNF8-216ENST00000573795 NDRG2Q9UN36 371 aaKnown RBP23.91■■□□□ 1.42
SNF8-216ENST00000573795 H0YCG3 227 aa23.9■■□□□ 1.42
SNF8-216ENST00000573795 LIG4P49917 911 aa23.9■■□□□ 1.42
SNF8-216ENST00000573795 ZNF131P52739 623 aa23.9■■□□□ 1.42
SNF8-216ENST00000573795 GPR17Q13304 367 aa23.9■■□□□ 1.42
SNF8-216ENST00000573795 GPBP1Q86WP2 473 aa23.9■■□□□ 1.42
SNF8-216ENST00000573795 DEPDC1BQ8WUY9 529 aa23.9■■□□□ 1.42
SNF8-216ENST00000573795 BORCS6Q96GS4 357 aa23.9■■□□□ 1.42
SNF8-216ENST00000573795 EPC1Q9H2F5 836 aa23.9■■□□□ 1.42
SNF8-216ENST00000573795 CHRDQ9H2X0 955 aa23.9■■□□□ 1.42
SNF8-216ENST00000573795 NUP210Q8TEM1 1887 aaPredicted RBP23.9■■□□□ 1.42
SNF8-216ENST00000573795 SCN1AP35498 2009 aa23.89■■□□□ 1.42
SNF8-216ENST00000573795 MED19A0JLT2 244 aaPredicted RBP23.89■■□□□ 1.41
SNF8-216ENST00000573795 MAN2B1O00754 1011 aa23.89■■□□□ 1.41
SNF8-216ENST00000573795 HNRNPDLO14979 420 aaKnown RBP23.89■■□□□ 1.41
SNF8-216ENST00000573795 OGTO15294 1046 aa23.89■■□□□ 1.41
SNF8-216ENST00000573795 GRIN1Q05586 938 aa23.89■■□□□ 1.41
SNF8-216ENST00000573795 DUSP4Q13115 394 aa23.89■■□□□ 1.41
SNF8-216ENST00000573795 SPATA1Q5VX52 437 aa23.89■■□□□ 1.41
SNF8-216ENST00000573795 MFSD6LQ8IWD5 586 aa23.89■■□□□ 1.41
SNF8-216ENST00000573795 TTC9BQ8N6N2 239 aa23.89■■□□□ 1.41
SNF8-216ENST00000573795 ATRIPQ8WXE1 791 aa23.89■■□□□ 1.41
SNF8-216ENST00000573795 AK8Q96MA6 479 aa23.89■■□□□ 1.41
SNF8-216ENST00000573795 TMEM209Q96SK2 561 aa23.89■■□□□ 1.41
SNF8-216ENST00000573795 OXCT2Q9BYC2 517 aaPredicted RBP23.89■■□□□ 1.41
SNF8-216ENST00000573795 DLL3Q9NYJ7 618 aa23.89■■□□□ 1.41
SNF8-216ENST00000573795 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.89■■□□□ 1.41
SNF8-216ENST00000573795 PIAS3Q9Y6X2 628 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms