RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 GAB3Q8WWW8 586 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 IFT74Q96LB3 600 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 NACC1Q96RE7 527 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 ZSWIM6Q9HCJ5 1215 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 SLC38A7Q9NVC3 462 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 AFF4Q9UHB7 1163 aaKnown RBP13.36□□□□□ -0.27
PRPF8-208ENST00000573716 ZMIZ1Q9ULJ6 1067 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 ATG2BQ96BY7 2078 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 CITO14578 2027 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 MYBPHLA2RUH7 354 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 TM4SF5O14894 197 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 MED24O75448 989 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 EPN2O95208 641 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 SPATA31C1P0DKV0 1188 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 HARSP12081 509 aaKnown RBP13.35□□□□□ -0.27
PRPF8-208ENST00000573716 MARCKSP29966 332 aaPredicted RBP13.35□□□□□ -0.27
PRPF8-208ENST00000573716 NOVA1P51513 510 aaKnown RBP13.35□□□□□ -0.27
PRPF8-208ENST00000573716 MLLT6P55198 1093 aaPredicted RBP13.35□□□□□ -0.27
PRPF8-208ENST00000573716 FOXC1Q12948 553 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 ZNF568Q3ZCX4 644 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 STXBP5Q5T5C0 1151 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 UNQ6494/PRO21346Q6UXR6 183 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 RALGPS2Q86X27 583 aaPredicted RBP13.35□□□□□ -0.27
PRPF8-208ENST00000573716 CATSPER3Q86XQ3 398 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 C18orf25Q96B23 403 aaPredicted RBP13.35□□□□□ -0.27
PRPF8-208ENST00000573716 LOXL4Q96JB6 756 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 PGLYRP2Q96PD5 576 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 GPR88Q9GZN0 384 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 PDRG1Q9NUG6 133 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 ORC3Q9UBD5 711 aaPredicted RBP13.35□□□□□ -0.27
PRPF8-208ENST00000573716 YIPF1Q9Y548 306 aa13.35□□□□□ -0.27
PRPF8-208ENST00000573716 ZFYVE26Q68DK2 2539 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 K7ERI5 159 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 WNT7AO00755 349 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 REC8O95072 547 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 CYP11B2P19099 503 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 SPINK2P20155 84 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 MPLP40238 635 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 GRM5P41594 1212 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 EFNA5P52803 228 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 EPHB3P54753 998 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 EPHA5P54756 1037 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 TNK2Q07912 1038 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 SCRN1Q12765 414 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 ARHGAP29Q52LW3 1261 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 TCEAL6Q6IPX3 200 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 PKN3Q6P5Z2 889 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 ARID3BQ8IVW6 561 aaPredicted RBP13.34□□□□□ -0.27
PRPF8-208ENST00000573716 APPL2Q8NEU8 664 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 TCEAL3Q969E4 200 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 ZMAT2Q96NC0 199 aaKnown RBP13.34□□□□□ -0.27
PRPF8-208ENST00000573716 TBC1D32Q96NH3 1257 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 TCHPQ9BT92 498 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 LSM14BQ9BX40 385 aaKnown RBP13.34□□□□□ -0.27
PRPF8-208ENST00000573716 CDT1Q9H211 546 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 TUFT1Q9NNX1 390 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 SLC8A2Q9UPR5 921 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 IGF2RP11717 2491 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 STK36Q9NRP7 1315 aa13.34□□□□□ -0.27
PRPF8-208ENST00000573716 EML5Q05BV3 1969 aa13.33□□□□□ -0.28
PRPF8-208ENST00000573716 CCDC169A6NNP5 214 aa13.33□□□□□ -0.28
PRPF8-208ENST00000573716 GIPC1O14908 333 aa13.33□□□□□ -0.28
PRPF8-208ENST00000573716 OR4Q2P0C623 313 aa13.33□□□□□ -0.28
PRPF8-208ENST00000573716 HOXA6P31267 233 aa13.33□□□□□ -0.28
PRPF8-208ENST00000573716 FCHO2Q0JRZ9 810 aa13.33□□□□□ -0.28
PRPF8-208ENST00000573716 CCINQ13939 588 aa13.33□□□□□ -0.28
PRPF8-208ENST00000573716 MRPL58Q14197 206 aaKnown RBP13.33□□□□□ -0.28
PRPF8-208ENST00000573716 GPR158Q5T848 1215 aa13.33□□□□□ -0.28
PRPF8-208ENST00000573716 WASF1Q92558 559 aa13.33□□□□□ -0.28
PRPF8-208ENST00000573716 DDX12PQ92771 950 aa13.33□□□□□ -0.28
PRPF8-208ENST00000573716 SUSD3Q96L08 255 aa13.33□□□□□ -0.28
PRPF8-208ENST00000573716 ACAP3Q96P50 834 aa13.33□□□□□ -0.28
PRPF8-208ENST00000573716 ATXN3LQ9H3M9 355 aa13.33□□□□□ -0.28
PRPF8-208ENST00000573716 TNFSF13BQ9Y275 285 aa13.33□□□□□ -0.28
PRPF8-208ENST00000573716 NUP210Q8TEM1 1887 aaPredicted RBP13.33□□□□□ -0.28
PRPF8-208ENST00000573716 RPL9P32969 192 aaKnown RBP13.32□□□□□ -0.28
PRPF8-208ENST00000573716 MCM7P33993 719 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 RAP1GAPP47736 663 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 ALDH1A3P47895 512 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 CREB5Q02930 508 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 ZNF252P-AS1Q0IIN9 211 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 DUSP4Q13115 394 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 PLD1Q13393 1074 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 ACAP1Q15027 740 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 ARHGAP15Q53QZ3 475 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 TMC8Q8IU68 726 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 SYNPOQ8N3V7 929 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 ERMNQ8TAM6 284 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 TNFRSF25Q93038 417 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 LRRC3BQ96PB8 259 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 MTMR9Q96QG7 549 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 EDEM2Q9BV94 578 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 TMEM60Q9H2L4 133 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 VPS45Q9NRW7 570 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 POLR3BQ9NW08 1133 aaPredicted RBP13.32□□□□□ -0.28
PRPF8-208ENST00000573716 MAFFQ9ULX9 164 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 PCDHB8Q9UN66 801 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 SLC27A5Q9Y2P5 690 aa13.32□□□□□ -0.28
PRPF8-208ENST00000573716 TIMM13Q9Y5L4 95 aaPredicted RBP13.32□□□□□ -0.28
PRPF8-208ENST00000573716 C4orf47A7E2U8 309 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms