RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 ZNF516Q92618 1163 aa12.86□□□□□ -0.35
TRIM25-205ENST00000572021 PABPC5Q96DU9 382 aaKnown RBP12.86□□□□□ -0.35
TRIM25-205ENST00000572021 TSPAN18Q96SJ8 248 aa12.86□□□□□ -0.35
TRIM25-205ENST00000572021 CGRRF1Q99675 332 aa12.86□□□□□ -0.35
TRIM25-205ENST00000572021 APOL5Q9BWW9 433 aa12.86□□□□□ -0.35
TRIM25-205ENST00000572021 SIX4Q9UIU6 781 aa12.86□□□□□ -0.35
TRIM25-205ENST00000572021 FRMD4BQ9Y2L6 1034 aa12.86□□□□□ -0.35
TRIM25-205ENST00000572021 IRAK3Q9Y616 596 aa12.86□□□□□ -0.35
TRIM25-205ENST00000572021 LRRIQ3A6PVS8 624 aaPredicted RBP12.85□□□□□ -0.35
TRIM25-205ENST00000572021 TRAPPC3O43617 180 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 ADCY5O95622 1261 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 CLCN1P35523 988 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 ZNF165P49910 485 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 CDR1P51861 262 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 STIM1Q13586 685 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 PSMD5Q16401 504 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 RSPO2Q6UXX9 243 aaPredicted RBP12.85□□□□□ -0.35
TRIM25-205ENST00000572021 DSTYKQ6XUX3 929 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.85□□□□□ -0.35
TRIM25-205ENST00000572021 WDR49Q8IV35 697 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 CXorf38Q8TB03 319 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 FEZF2Q8TBJ5 459 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 NELFBQ8WX92 580 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 ELMO3Q96BJ8 720 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 ANKRD36BP1Q96IX9 119 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 SUSD3Q96L08 255 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 CLSTN3Q9BQT9 956 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 EMILIN2Q9BXX0 1053 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 RRAGDQ9NQL2 400 aaPredicted RBP12.85□□□□□ -0.35
TRIM25-205ENST00000572021 THEGQ9P2T0 379 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 STK39Q9UEW8 545 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 HCFC2Q9Y5Z7 792 aa12.85□□□□□ -0.35
TRIM25-205ENST00000572021 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.84□□□□□ -0.35
TRIM25-205ENST00000572021 PSMA7O14818 248 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 TNNC2P02585 160 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 TRIM49P0CI25 452 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 TRIM49CP0CI26 452 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 CCNE1P24864 410 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 RPL13P26373 211 aaKnown RBP12.84□□□□□ -0.35
TRIM25-205ENST00000572021 KCNQ1P51787 676 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 BFSP1Q12934 665 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 COL19A1Q14993 1142 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 SURF1Q15526 300 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 NFIL3Q16649 462 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 DUOXA2Q1HG44 320 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 EDRF1Q3B7T1 1238 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 VARS2Q5ST30 1063 aaKnown RBP12.84□□□□□ -0.35
TRIM25-205ENST00000572021 NT5DC4Q86YG4 428 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 FAM186BQ8IYM0 893 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 C12orf76Q8N812 135 aaPredicted RBP12.84□□□□□ -0.35
TRIM25-205ENST00000572021 PARD3BQ8TEW8 1205 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 SLC22A17Q8WUG5 538 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 PIK3R5Q8WYR1 880 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 DHTKD1Q96HY7 919 aaPredicted RBP12.84□□□□□ -0.35
TRIM25-205ENST00000572021 SENP8Q96LD8 212 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 TSG101Q99816 390 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 DUSP9Q99956 384 aaKnown RBP12.84□□□□□ -0.35
TRIM25-205ENST00000572021 DNAJC25Q9H1X3 360 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 RXFP1Q9HBX9 757 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 CLEC1BQ9P126 229 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 PCDHB8Q9UN66 801 aa12.84□□□□□ -0.35
TRIM25-205ENST00000572021 TSC2P49815 1807 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 A0A0C4DFX4 3053 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 M0QZQ0 153 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 AARSP49588 968 aaKnown RBP eCLIP12.83□□□□□ -0.362e-6■■■■■ 38.6
TRIM25-205ENST00000572021 TAF6P49848 677 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 CLCN4P51793 760 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 ARPP19P56211 112 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 KCNC3Q14003 757 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 MYBPC2Q14324 1141 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 IQCB1Q15051 598 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 C1orf220Q5T0J3 134 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 TRAPPC11Q7Z392 1133 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRIM25-205ENST00000572021 TMEM174Q8WUU8 243 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 CDCA3Q99618 268 aaPredicted RBP12.83□□□□□ -0.36
TRIM25-205ENST00000572021 BPIFA3Q9BQP9 254 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 GTPBP4Q9BZE4 634 aaKnown RBP12.83□□□□□ -0.36
TRIM25-205ENST00000572021 MMRN2Q9H8L6 949 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 CDH22Q9UJ99 828 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 ITGA11Q9UKX5 1188 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 SSX2IPQ9Y2D8 614 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 CDY1Q9Y6F8 540 aa12.83□□□□□ -0.36
TRIM25-205ENST00000572021 KPNA7A9QM74 516 aa12.82□□□□□ -0.36
TRIM25-205ENST00000572021 CYB561D2O14569 222 aa12.82□□□□□ -0.36
TRIM25-205ENST00000572021 CETN3O15182 167 aa12.82□□□□□ -0.36
TRIM25-205ENST00000572021 CST3P01034 146 aaPredicted RBP12.82□□□□□ -0.36
TRIM25-205ENST00000572021 ADH1AP07327 375 aa12.82□□□□□ -0.36
TRIM25-205ENST00000572021 OR1D2P34982 312 aa12.82□□□□□ -0.36
TRIM25-205ENST00000572021 PSMC2P35998 433 aaKnown RBP12.82□□□□□ -0.36
TRIM25-205ENST00000572021 VAMP7P51809 220 aa12.82□□□□□ -0.36
TRIM25-205ENST00000572021 RBP5P82980 135 aa12.82□□□□□ -0.36
TRIM25-205ENST00000572021 DPCR1Q3MIW9 517 aa12.82□□□□□ -0.36
TRIM25-205ENST00000572021 TDRD10Q5VZ19 366 aaKnown RBP12.82□□□□□ -0.36
TRIM25-205ENST00000572021 TTI2Q6NXR4 508 aa12.82□□□□□ -0.36
TRIM25-205ENST00000572021 C11orf57Q6ZUT1 292 aaPredicted RBP12.82□□□□□ -0.36
TRIM25-205ENST00000572021 LUZP1Q86V48 1076 aa12.82□□□□□ -0.36
TRIM25-205ENST00000572021 TRIML1Q8N9V2 468 aa12.82□□□□□ -0.36
TRIM25-205ENST00000572021 BORCS6Q96GS4 357 aa12.82□□□□□ -0.36
TRIM25-205ENST00000572021 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.82□□□□□ -0.361e-6■■■■■ 67.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms