RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 C1QTNF9P0C862 333 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 CPB1P15086 417 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 CYP11B2P19099 503 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 MARCKSP29966 332 aaPredicted RBP12.42□□□□□ -0.42
CHMP6-202ENST00000571457 MPLP40238 635 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 GRM5P41594 1212 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 TXKP42681 527 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 NOVA1P51513 510 aaKnown RBP12.42□□□□□ -0.42
CHMP6-202ENST00000571457 EPHB3P54753 998 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 SOX4Q06945 474 aaPredicted RBP12.42□□□□□ -0.42
CHMP6-202ENST00000571457 STK3Q13188 491 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 PON2Q15165 354 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 XKR4Q5GH76 650 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 TXNDC11Q6PKC3 985 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 ALKAL1Q6UXT8 129 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 KBTBD6Q86V97 674 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 ARID3BQ8IVW6 561 aaPredicted RBP12.42□□□□□ -0.42
CHMP6-202ENST00000571457 OXER1Q8TDS5 423 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 BSNDQ8WZ55 320 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 ZC3H10Q96K80 434 aaKnown RBP12.42□□□□□ -0.42
CHMP6-202ENST00000571457 SUSD3Q96L08 255 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 OXCT2Q9BYC2 517 aaPredicted RBP12.42□□□□□ -0.42
CHMP6-202ENST00000571457 ZSWIM6Q9HCJ5 1215 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 TUFT1Q9NNX1 390 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 C2orf42Q9NWW7 574 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 OBP2AQ9NY56 170 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 TPCN1Q9ULQ1 816 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 SLC8A2Q9UPR5 921 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 TNFSF13BQ9Y275 285 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 USP20Q9Y2K6 914 aa12.42□□□□□ -0.42
CHMP6-202ENST00000571457 NCANO14594 1321 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 A0A087WWV3 80 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 A0A1W2PRU2 124 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 ARHGEF35A5YM69 484 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 K7ERI5 159 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 EXTL3O43909 919 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 REC8O95072 547 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 FGF19O95750 216 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 EDN1P05305 212 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 SPATA31C1P0DKV0 1188 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 KRT2P35908 639 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 ELF2Q15723 593 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 EARS2Q5JPH6 523 aaKnown RBP12.41□□□□□ -0.42
CHMP6-202ENST00000571457 WDR44Q5JSH3 913 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 DAB2IPQ5VWQ8 1189 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 PADI6Q6TGC4 694 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 ERMNQ8TAM6 284 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 WASF1Q92558 559 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 RSPRY1Q96DX4 576 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 THG1LQ9NWX6 298 aaKnown RBP12.41□□□□□ -0.42
CHMP6-202ENST00000571457 GTSE1Q9NYZ3 720 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 YIPF1Q9Y548 306 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 NBEAQ8NFP9 2946 aa12.41□□□□□ -0.42
CHMP6-202ENST00000571457 DMXL2Q8TDJ6 3036 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 KCNE1P15382 129 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 MCM4P33991 863 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 ALDH1A3P47895 512 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 ITPRIPL2Q3MIP1 535 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 ZNF568Q3ZCX4 644 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 ARHGAP15Q53QZ3 475 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 NT5DC1Q5TFE4 455 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 RNF19BQ6ZMZ0 732 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 CATSPER3Q86XQ3 398 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 CAMKK1Q8N5S9 505 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 TTC8Q8TAM2 541 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 DDX12PQ92771 950 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 KIFAP3Q92845 792 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 TMEM209Q96SK2 561 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 EDEM2Q9BV94 578 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 PCDHB8Q9UN66 801 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 ASB3Q9Y575 518 aa12.4□□□□□ -0.42
CHMP6-202ENST00000571457 PHLPP2Q6ZVD8 1323 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 FAM205CA6NFA0 338 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 RHOBTB1O94844 696 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 PXNP49023 591 aaPredicted RBP12.39□□□□□ -0.43
CHMP6-202ENST00000571457 AMPD2Q01433 879 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 YWHAHQ04917 246 aaPredicted RBP12.39□□□□□ -0.43
CHMP6-202ENST00000571457 ZNF252P-AS1Q0IIN9 211 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 GRSF1Q12849 480 aaKnown RBP eCLIP12.39□□□□□ -0.43
CHMP6-202ENST00000571457 FOXC1Q12948 553 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 NR5A1Q13285 461 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 KARSQ15046 597 aaKnown RBP12.39□□□□□ -0.43
CHMP6-202ENST00000571457 PLK5Q496M5 336 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 TMC8Q8IU68 726 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 BEST2Q8NFU1 509 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 BPIFB1Q8TDL5 484 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 ZFYVE19Q96K21 471 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 YTHDC1Q96MU7 727 aaKnown RBP12.39□□□□□ -0.43
CHMP6-202ENST00000571457 ZMAT2Q96NC0 199 aaKnown RBP12.39□□□□□ -0.43
CHMP6-202ENST00000571457 TBC1D32Q96NH3 1257 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 ACAP3Q96P50 834 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 MTMR9Q96QG7 549 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 POLR3CQ9BUI4 534 aaPredicted RBP12.39□□□□□ -0.43
CHMP6-202ENST00000571457 KIFC3Q9BVG8 833 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 LRRC3Q9BY71 257 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 ADAM33Q9BZ11 813 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 TM6SF1Q9BZW5 370 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 GJB4Q9NTQ9 266 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 CNTN3Q9P232 1028 aa12.39□□□□□ -0.43
CHMP6-202ENST00000571457 C4orf47A7E2U8 309 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms